Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L03
         (175 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    22   3.0  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       21   4.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    21   7.0  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    20   9.2  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 115 VRRD*VQCHNFDCRRVS 165
           V RD V C + DC RV+
Sbjct: 33  VDRDKVYCGHLDCTRVA 49


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 1   CCRNSVRGKRARAYYTP 51
           CC  S R +R R  +TP
Sbjct: 323 CCIESFRRRRRRDAFTP 339


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 175 NISKTHADNQNYGTELNH 122
           N    HA N N G  LN+
Sbjct: 488 NAHSVHAANSNMGLHLNN 505


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 84  NKIIIEDGYKKWRVV 40
           +K +IEDG ++W +V
Sbjct: 197 HKKLIEDGAEEWYLV 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,808
Number of Sequences: 2352
Number of extensions: 2736
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 36
effective length of database: 479,307
effective search space used: 10065447
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)