Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L03
         (175 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    25   0.063
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    25   0.063
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   0.19 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   0.26 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   2.4  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    19   4.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    19   5.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       19   7.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   7.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   7.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    18   9.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          18   9.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    18   9.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    18   9.6  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.063
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 40  YYTPFFISIFNYYFILNIF*SRHNGVR 120
           Y+ P F+ I++Y+FI+    +    +R
Sbjct: 225 YFVPLFLIIYSYWFIIQAVAAHEKNMR 251


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 25.4 bits (53), Expect = 0.063
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 40  YYTPFFISIFNYYFILNIF*SRHNGVR 120
           Y+ P F+ I++Y+FI+    +    +R
Sbjct: 101 YFVPLFLIIYSYWFIIQAVAAHEKNMR 127


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 0.19
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 37  AYYTPFFISIFNYYFI 84
           ++Y P F+ +F YY I
Sbjct: 214 SFYLPLFVMVFTYYKI 229


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 7   RNSVRGKRARAYYTPF 54
           RN VR   ARA+ TPF
Sbjct: 258 RNGVRLSSARAFITPF 273


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 116 SAVIKFSAIILIVGVCLA 169
           S  +KF  +I ++ +CLA
Sbjct: 169 SRAVKFIIVIWLLALCLA 186


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 52  FFISIFNYYFIL 87
           FFI IF Y  IL
Sbjct: 413 FFIVIFTYIIIL 424


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -1

Query: 172 ISKTHADNQNYGTELNHGGRHYDGIKKYLK*NNN 71
           I  TH  N N    + +     D  +K  K N N
Sbjct: 409 IRNTHCVNNNQNDNIQNTNNQNDNNQKNNKKNAN 442


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 102 GLKNI*NKIIIEDGYKK 52
           GL+NI    I + GYKK
Sbjct: 202 GLRNIVLDNIKKSGYKK 218


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 81 KIIIEDGYKKWRV 43
          KII   G + WRV
Sbjct: 6  KIITTTGLENWRV 18


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 27  TRTRILHAIFYIHLQ 71
           T TR+LH I   H Q
Sbjct: 186 TGTRLLHGILSQHPQ 200


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 76  YFILNIF*SRHNG 114
           Y ILN   S HNG
Sbjct: 400 YEILNFRKSEHNG 412


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 175 NISKTHADNQNYGTELNHGGRHYDGIKKYLK*NNN 71
           N + ++ +N N     N+ G + +G       NNN
Sbjct: 234 NTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNN 268


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 36  RILHAIFYIHLQLLF 80
           R++HA+  I  +LLF
Sbjct: 244 RLVHAVNEIEKRLLF 258


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 76  YFILNIF*SRHNG 114
           Y ILN   S HNG
Sbjct: 490 YEILNFRKSEHNG 502


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,651
Number of Sequences: 438
Number of extensions: 744
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)