Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L02
         (178 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   0.99 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    22   2.3  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    22   2.3  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    21   5.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 0.99
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 120  HREMSSSNTLQKAIDLVTK 176
            HRE  SS+ LQKA D + K
Sbjct: 1113 HREAFSSSELQKAKDRLAK 1131


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 165 DQWLFARYLMNSFPYVKYCH 106
           D+W+  +Y M S    + CH
Sbjct: 280 DRWVAVKYPMKSLNTARRCH 299


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 165 DQWLFARYLMNSFPYVKYCH 106
           D+W+  +Y M S    + CH
Sbjct: 281 DRWVAVKYPMKSLNTARRCH 300


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 134  THFPMLNTATMKLGAYDKKV-ASMSYN*KQ 48
            T+  MLN  TMK  A DK +  S+S N K+
Sbjct: 1031 TYAMMLNGHTMKKEALDKLIDMSISDNNKK 1060


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,143
Number of Sequences: 2352
Number of extensions: 3241
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 37
effective length of database: 476,955
effective search space used: 10016055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)