Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L01
(288 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 28 1.1
02_03_0052 - 14456925-14457176,14457277-14457437,14457843-144579... 28 1.4
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 2.4
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 27 2.4
06_03_1168 - 28114656-28114721,28114800-28114889,28115139-281168... 27 3.2
03_04_0053 + 16873735-16873927,16874011-16874162,16874286-168743... 27 3.2
03_05_0883 + 28483429-28484385,28485090-28485398 26 4.2
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 26 4.2
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 26 5.6
11_06_0078 - 19854185-19856170 26 5.6
06_01_0297 - 2162632-2162651,2162718-2162788,2162962-2163314 26 5.6
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571... 26 5.6
11_04_0312 - 16259612-16260231,16260264-16262796 25 7.4
07_01_1155 + 10857771-10858028,10858455-10859159 25 7.4
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 25 7.4
03_01_0645 - 4731037-4731543,4731706-4731933 25 7.4
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 25 7.4
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 25 9.8
05_04_0384 - 20809397-20811547 25 9.8
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 25 9.8
02_04_0460 - 23118221-23118406,23118417-23118671,23118763-231188... 25 9.8
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 59 LKEKVLKYAETLRSKREITLIDGVT-LESKGSPRSARALEPLSDEPKAIE 205
L+E+ L AE + ++ L + + +KGSP SA A P S P A+E
Sbjct: 163 LREQ-LATAEAAKKDAQVALEEAKKRVGTKGSPASAAAASPRSPSPVAVE 211
>02_03_0052 -
14456925-14457176,14457277-14457437,14457843-14457914,
14458105-14458221,14458310-14458322,14458917-14458946,
14459837-14460010,14460276-14460417,14460731-14460792,
14461047-14461643
Length = 539
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 243 SAAESTNLDSTCASIAFGSSDSGSKARADLGEPLLSKVT 127
S S + TCASI +SD+ S + DL S T
Sbjct: 362 SCIVSNQIKQTCASIIQDTSDTSSNTKTDLSSDTPSNTT 400
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 134 LESKGSPRSARALEPLSDEPKAIEAQVESRLVDSAADFLENYVIQFKMPS 283
L+ KGSPRS + P+ K E+Q+ D L++ V+Q PS
Sbjct: 3519 LQDKGSPRSTQPPPPIESSEK--ESQIAE---DGQTVLLQSSVVQESTPS 3563
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 DVYM-CLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARALEPLSDEPKAIEAQVES 220
DV++ CLKE + ETL + EI + DG G SA+ S E + E+
Sbjct: 197 DVHLSCLKELMSHSHETLTNLYEILMEDGTPTNDCGEGASAQDNSSYSGESNGDAEEFEN 256
Query: 221 R 223
+
Sbjct: 257 Q 257
>06_03_1168 -
28114656-28114721,28114800-28114889,28115139-28116877,
28117146-28117227,28117794-28117865,28119412-28119453,
28120352-28120401,28121253-28121372,28121635-28121707,
28121828-28122100,28122413-28122517,28122730-28122859,
28123106-28123356,28123787-28123993,28124185-28124455,
28124808-28124914
Length = 1225
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 228 TNLDSTCASIAFGSSDSGSKARADLGEPLLSKVTPSIRVI 109
+ LDS C S+ FG G + R + L++ + ++R I
Sbjct: 654 SGLDSLCGSVGFGVDVGGDEERHGVLVQLVASASATVRSI 693
>03_04_0053 +
16873735-16873927,16874011-16874162,16874286-16874380,
16874704-16874818,16875054-16875343,16875436-16875585,
16876478-16876598,16876671-16876942,16877466-16877937
Length = 619
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 74 LKYAETLRSKREITLIDGVTLESKGSPRSARALEPLSDEPKAIEAQVESRLVDSAADFLE 253
L + LRS R++ L D V + KG + + D+P + +AA F++
Sbjct: 384 LNQVKVLRSMRQLRLEDVVVGQYKGHSKGGKTYPAYVDDPTVPSGSITPTFA-AAALFID 442
Query: 254 N 256
N
Sbjct: 443 N 443
>03_05_0883 + 28483429-28484385,28485090-28485398
Length = 421
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 32 CVDDDVYMCLK-EKVLKYAETLRSKREITLIDGVTLESKGSPRSARALEPLSDEPKA 199
C DD ++C + + A L + + + SPRSA A SD+P A
Sbjct: 32 CPADDAFLCQACDASVHSANPLARRHHRVRLPSASSSPASSPRSAAAPRAGSDDPDA 88
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 149 SPRSARALEPLSDEPKAIEAQVESRLVDSAADFLEN 256
S RS L D + ++ +VE L+D A DF+E+
Sbjct: 165 SKRSIHELVAQIDPSEKLDPEVEDVLIDIAEDFVES 200
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 173 EPLSDEPKAIEAQVESRLVDSAADFLENYVIQ 268
E L+ E IEAQ+E+R+ D + D ++Q
Sbjct: 327 EELTAELLGIEAQIEARIRDRSTDATPGPIVQ 358
>11_06_0078 - 19854185-19856170
Length = 661
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 2 HEGVLGIVKDCVDDDVYMCLKEKVLKYA--ETLRSKREITLIDGVTLESKGSPRSARALE 175
HEG++ ++ C D D M + E V + + + L S ++I L G+ L K + ++A AL+
Sbjct: 415 HEGIIKLLGYCFDADFPMLVYEYVDRGSLYDILNSAQDIPL--GLRL--KITVKTAEALD 470
Query: 176 PLSDEP 193
L P
Sbjct: 471 HLHSSP 476
>06_01_0297 - 2162632-2162651,2162718-2162788,2162962-2163314
Length = 147
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +1
Query: 34 CRR*RVYVPQGEGFE---ICRDFEVEEGDNSD*WCHLGEQRFAKVRTCF--GAAVR*AES 198
C R +P G+G+ + ++ GD +C+ G FA +CF GA V+ +
Sbjct: 29 CHTPRQDLPLGDGYVPGGVLTSLDIRPGDW---YCNCGYHNFASRASCFKCGAIVKDLPA 85
Query: 199 DRGTGGVKISRFS 237
+G GGV F+
Sbjct: 86 GQG-GGVANGDFA 97
>02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,
5710542-5710661,5711321-5711421,5711618-5711743,
5713504-5713596,5713694-5713816,5713889-5714032,
5714539-5714672,5714893-5715002,5715315-5715430,
5716438-5716572,5716650-5716820,5717545-5717709,
5718165-5718242,5718313-5718445,5718551-5718741,
5718842-5718914,5719001-5719056,5719142-5719300,
5719383-5719496,5719562-5719654,5720544-5720726,
5720801-5720878,5720966-5721052,5721135-5721216,
5721288-5721400,5721486-5721636,5721759-5721877,
5721966-5722163,5722377-5722442,5723837-5723957,
5724224-5724343,5724412-5724542,5725210-5725341,
5725418-5725519,5726231-5726437,5726510-5726626,
5727468-5727623,5727721-5727810,5728624-5728848,
5728969-5729091,5729202-5729284,5729459-5729618,
5730264-5730374,5730652-5730751,5731375-5731454,
5731752-5731847,5731961-5732110
Length = 1991
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 35 VDDDVYMCLKEKVLKYAETLRSKREITLID 124
VDD + +C+K+ + + +R +R I +I+
Sbjct: 1877 VDDIIKLCMKQDCISPNDNIRKRRFIAMIE 1906
>11_04_0312 - 16259612-16260231,16260264-16262796
Length = 1050
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 237 AESTNLDSTCASIAFGSSDSGSKARADLGEPLLSKVTPSIRVISLFDLKVSAYF 76
AE ++ T + + AD+G+ L + PS+ +SL DL YF
Sbjct: 925 AEHVEMEETVGNEIVSADTRYPAHPADVGDSLDPEAFPSLTHLSLVDLPGMEYF 978
>07_01_1155 + 10857771-10858028,10858455-10859159
Length = 320
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 55 VPQGEGFEICRDFEVEEGDNSD 120
+ G+GFEI DF E+G+ D
Sbjct: 204 IDTGDGFEIQDDFGREDGETKD 225
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 25.4 bits (53), Expect = 7.4
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = -1
Query: 243 SAAESTNLDSTCASIAFGSSDSGSKARADLGEPLLSKVTPSIRVISLFDLKVSAYFKTFS 64
S+A S N +S+ A A S+ S A P P + K +YF S
Sbjct: 208 SSASSDNSESSNA--ATNSAKSAKVAGCSSVRPPPPPPPPPLPPPMPATFKSKSYFSGSS 265
Query: 63 LRH-IYTSSSTQSLTMPKTPSC 1
+SSS+ S + P TPSC
Sbjct: 266 RASPANSSSSSSSSSAPSTPSC 287
>03_01_0645 - 4731037-4731543,4731706-4731933
Length = 244
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 215 PPVPLSLSAHRTAAP---KHVRTLANLCSP 135
PP P S HR AAP + AN C+P
Sbjct: 100 PPAPAPESHHRRAAPAEEEEEEEAANYCAP 129
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 62 KEKVLKYAETLRSKREITLIDGVTLESKGSPR 157
KEK + L +++ L+DGV + S SPR
Sbjct: 483 KEKSSQAKRKLAKTKKMQLLDGVVVVSTSSPR 514
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 143 KGSPRSARALEPLSDEPKAIEAQVESRLVDSAADFLENYVIQFKM 277
K + RA+ PLS PK I Q +S + + + E+ V K+
Sbjct: 716 KAQEAAKRAVNPLSSSPKRIVEQKDSFYKEFSGNSYEDLVPNRKL 760
>05_04_0384 - 20809397-20811547
Length = 716
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 130 HLGEQRFAKVRTCFGAAVR*AESDRGTGGVKISRF 234
H+ E V+TC + S TGG+ ++RF
Sbjct: 527 HIEENVKGAVKTCVMTVAKKTLSTNSTGGLHVARF 561
>04_04_0179 -
23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 218 TPPVPLSLSAHRTAAPKHVRTLANL-CSP 135
+PPV SLSA R K V N+ C+P
Sbjct: 787 SPPVRSSLSAERVGIAKSVERSENIDCTP 815
>02_04_0460 -
23118221-23118406,23118417-23118671,23118763-23118851,
23119527-23119605,23121317-23121484,23121760-23122137
Length = 384
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 98 SKREITLIDGVTLESKGSPRSARALEPLSDEPKAIEAQVESRLVDSAAD 244
S ++T+IDG+ +++ + + + L + DE E+ LVD+ D
Sbjct: 113 SSSDLTVIDGLLAQAEVTEQLLKRLTEVCDEIDEFCHAHEAALVDAVTD 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,733,396
Number of Sequences: 37544
Number of extensions: 137119
Number of successful extensions: 527
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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