Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L01
(288 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 28 0.93
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z83319-5|CAB05907.2| 446|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 26 3.8
U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical pr... 26 5.0
U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical pr... 26 5.0
AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical ... 26 5.0
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 25 6.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 25 6.6
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 25 6.6
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 25 6.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 25 6.6
AF101305-3|AAF98595.1| 341|Caenorhabditis elegans Serpentine re... 25 6.6
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 25 8.7
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 25 8.7
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 25 8.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 25 8.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 25 8.7
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 25 8.7
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 28.3 bits (60), Expect = 0.93
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 44 DVYMCLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARALEPLSDEPKAIEAQVESR 223
DV + + K+ + I I + ++SKG P A++ L + K+++ VESR
Sbjct: 257 DVKSTINGAIQKFLDLGVDGFHIDHISQLAVDSKGRPNHDEAVKVLEELTKSVQIYVESR 316
Query: 224 --LVD 232
LVD
Sbjct: 317 DELVD 321
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 2 HEGVLGIVKDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARALEPL 181
H+ +L + C+++ +K + LK ET KREI L + ++ +
Sbjct: 432 HKRILKDKEQCIEELENRIMKLETLKETETFEEKREINKSATNELTDMEISKFSKIIATG 491
Query: 182 SDEPKAIEAQVESRLVDSAADFLE 253
+ K E +V+ +D+ + LE
Sbjct: 492 KNARKWNEMKVQFERIDNIVNGLE 515
>Z83319-5|CAB05907.2| 446|Caenorhabditis elegans Hypothetical
protein T02D1.4 protein.
Length = 446
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -3
Query: 202 YRFRLIGQRLQSTCGPWRTFALQGDTINQSYLPLRPQSLCIFQNLLLEAHIHVIVDTVL 26
Y +++ L C W T + + + P +SLC +NL I ++V +L
Sbjct: 165 YPYQIYFVNLFGFCAMWLTVLMTAECYLHVFFPSHSKSLCTKRNLSRSYFIILVVGALL 223
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = -3
Query: 154 WRTFALQGDTINQSYLPLRPQSLCIFQNLLLEAHIHVIVDTVLNNAQNALV 2
++ FA++ T+N++ + + Q++ IF + + +I T+ N A V
Sbjct: 298 FKIFAMKKSTLNKNEIRVLVQAIVIFVFFQASSSVFLICQTIAFNTATAFV 348
>U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical
protein C56E6.3a protein.
Length = 621
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 155 RSARALEPLSDEPKAIEAQVESRLVDSAADFLENYVIQFK 274
RSA +EP D+ K +Q ++R A D +E FK
Sbjct: 46 RSALKIEPARDDDKENNSQPQARSQFKAKDTMEQMQSYFK 85
>U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical
protein C56E6.3b protein.
Length = 607
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 155 RSARALEPLSDEPKAIEAQVESRLVDSAADFLENYVIQFK 274
RSA +EP D+ K +Q ++R A D +E FK
Sbjct: 46 RSALKIEPARDDDKENNSQPQARSQFKAKDTMEQMQSYFK 85
>AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical
protein Y43C5A.6a protein.
Length = 395
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 134 LESKGSPRSARALEPLSDEPKAIEAQVESRLVDSAADFLENYVIQFKMPSS 286
+ESK S +++R + ++ A +A + + + D+A + EN+ + K+ SS
Sbjct: 35 IESKMSAQASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESS 85
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 138 SKVTPS-IRVISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMPKT 10
S+ +PS + ++ LF+ ++ F SL Y ++ +T PKT
Sbjct: 2315 SQKSPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDYITHPKT 2358
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 138 SKVTPS-IRVISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMPKT 10
S+ +PS + ++ LF+ ++ F SL Y ++ +T PKT
Sbjct: 2899 SQKSPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDYITHPKT 2942
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 138 SKVTPS-IRVISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMPKT 10
S+ +PS + ++ LF+ ++ F SL Y ++ +T PKT
Sbjct: 2315 SQKSPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDYITHPKT 2358
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 138 SKVTPS-IRVISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMPKT 10
S+ +PS + ++ LF+ ++ F SL Y ++ +T PKT
Sbjct: 2899 SQKSPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDYITHPKT 2942
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 72 TFSLRHIYTSSSTQSLTMPKTPS 4
T + HIYTSSS++ P PS
Sbjct: 3309 TDDITHIYTSSSSRRYQPPTAPS 3331
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 120 IRVISLFDLKVSAYFKTFSLRH 55
+R I LK+ A+ KTF +RH
Sbjct: 897 LREICKISLKLQAFMKTFKVRH 918
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 138 SKVTPS-IRVISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMPKT 10
S+ +PS + ++ LF+ ++ F SL Y ++ +T PKT
Sbjct: 2899 SQKSPSYVEIVELFEKNMARTFGGTSLAPRYVNTKVDYITHPKT 2942
>AF101305-3|AAF98595.1| 341|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 1 protein.
Length = 341
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 118 QSYLPLRPQSLCIFQNLLLEAHIHVIVDTVLN 23
Q L S CIF L + A IH+IV +L+
Sbjct: 45 QKATKLHFNSKCIFHTLTIFAFIHMIVRIILH 76
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -1
Query: 246 KSAAESTNLDSTCASIAFGSSDSGSKARADLGEPLLSKVTP 124
KS T T A SSDS + + +P +K TP
Sbjct: 324 KSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATP 364
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 249 KKSAAESTNLDST---CASIAFGSSDSGSKARADLGEPLLSKVTP 124
KK AA+ T ++T A A SSDS + + +P +K TP
Sbjct: 504 KKPAAKPTPANATPKPVAKKAESSSDSSDDEKKPVAKPTSAKATP 548
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -1
Query: 246 KSAAESTNLDSTCASIAFGSSDSGSKARADLGEPLLSKVTP 124
KS T T A SSDS + + +P +K TP
Sbjct: 599 KSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATP 639
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
ZK593.4 protein.
Length = 1477
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 111 ISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMPKTPS 4
+SLFD K++A K S+ H TS ++ +PS
Sbjct: 1367 VSLFDPKITAKRKRPSVSHKETSKKSRKRQSQASPS 1402
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 25.0 bits (52), Expect = 8.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 26 KDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARA----LEPLSDEP 193
K D+ + +EK+ K +E +++E L D + LES+ + + A A LE +
Sbjct: 13228 KQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEIATKKASADKLKLEEQAQAK 13287
Query: 194 KAIEAQVESR 223
KA E + +
Sbjct: 13288 KAAEVEAAKK 13297
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 25.0 bits (52), Expect = 8.7
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 26 KDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARA----LEPLSDEP 193
K D+ + +EK+ K +E +++E L D + LES+ + + A A LE +
Sbjct: 13228 KQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEIATKKASADKLKLEEQAQAK 13287
Query: 194 KAIEAQVESR 223
KA E + +
Sbjct: 13288 KAAEVEAAKK 13297
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 137 ESKGSPRSARALEPLSDEPKAIEAQVE 217
ES P + EP+ +EPK +E +V+
Sbjct: 372 ESGTPPLKEKTPEPIPEEPKKVEEEVK 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,423,585
Number of Sequences: 27780
Number of extensions: 111320
Number of successful extensions: 457
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -