BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K24
(367 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein p... 108 3e-24
U59498-1|AAC47295.1| 152|Drosophila melanogaster nucleoplasmin-... 108 3e-24
AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p pro... 108 3e-24
AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA... 108 3e-24
AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA... 101 4e-22
U59497-1|AAC47294.1| 121|Drosophila melanogaster nucleoplasmin-... 83 1e-16
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 30 1.1
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 30 1.1
X79243-1|CAA55830.1| 1213|Drosophila melanogaster dTAF II 150 pr... 28 4.3
AY089287-1|AAL90025.1| 726|Drosophila melanogaster AT08349p pro... 28 4.3
AY070564-1|AAL48035.1| 1221|Drosophila melanogaster LD43729p pro... 28 4.3
AE014296-1772|AAF50190.2| 1221|Drosophila melanogaster CG6711-PA... 28 4.3
AE013599-1448|AAM68666.1| 1740|Drosophila melanogaster CG8487-PA... 28 4.3
AE013599-1447|AAF58532.2| 1983|Drosophila melanogaster CG8487-PB... 28 4.3
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 27 10.0
>X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein
protein.
Length = 152
Score = 108 bits (259), Expect = 3e-24
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = +1
Query: 16 EYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSLQES 195
E FYGVTL+ S TWD + +Y R KLVI+Q LLG +AK +E NVV+V T ++S
Sbjct: 4 ESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDS 59
Query: 196 VKIPVAVLKAGETRHARLDFEFPDAPVIFTLIQGSGPVHLIGHHL 330
V+IP+AVLKAGETR D EF ++ V F LI+GSGPV++ GH++
Sbjct: 60 VQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104
>U59498-1|AAC47295.1| 152|Drosophila melanogaster
nucleoplasmin-like protein protein.
Length = 152
Score = 108 bits (259), Expect = 3e-24
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = +1
Query: 16 EYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSLQES 195
E FYGVTL+ S TWD + +Y R KLVI+Q LLG +AK +E NVV+V T ++S
Sbjct: 4 ESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDS 59
Query: 196 VKIPVAVLKAGETRHARLDFEFPDAPVIFTLIQGSGPVHLIGHHL 330
V+IP+AVLKAGETR D EF ++ V F LI+GSGPV++ GH++
Sbjct: 60 VQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104
>AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p
protein.
Length = 152
Score = 108 bits (259), Expect = 3e-24
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = +1
Query: 16 EYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSLQES 195
E FYGVTL+ S TWD + +Y R KLVI+Q LLG +AK +E NVV+V T ++S
Sbjct: 4 ESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDS 59
Query: 196 VKIPVAVLKAGETRHARLDFEFPDAPVIFTLIQGSGPVHLIGHHL 330
V+IP+AVLKAGETR D EF ++ V F LI+GSGPV++ GH++
Sbjct: 60 VQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104
>AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA
protein.
Length = 152
Score = 108 bits (259), Expect = 3e-24
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = +1
Query: 16 EYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSLQES 195
E FYGVTL+ S TWD + +Y R KLVI+Q LLG +AK +E NVV+V T ++S
Sbjct: 4 ESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP--KDS 59
Query: 196 VKIPVAVLKAGETRHARLDFEFPDAPVIFTLIQGSGPVHLIGHHL 330
V+IP+AVLKAGETR D EF ++ V F LI+GSGPV++ GH++
Sbjct: 60 VQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104
>AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA
protein.
Length = 156
Score = 101 bits (241), Expect = 4e-22
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = +1
Query: 16 EYFYGVTLSESHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKADELNVVQVETM--- 180
E FYGVTLSE ++ P+ EY S+KL+I+Q LGP+AK E NVVQ ET
Sbjct: 4 ESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAETNIND 63
Query: 181 -SLQESVKIPVAVLKAGETRHARLDFEFPDAPVIFTLIQGSGPVHLIG 321
++++KIP+AVLK GETR R + EFP+ V F L+QGSGPVH+ G
Sbjct: 64 DGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPVHVCG 111
>U59497-1|AAC47294.1| 121|Drosophila melanogaster
nucleoplasmin-like protein-short protein.
Length = 121
Score = 82.6 bits (195), Expect = 1e-16
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = +1
Query: 106 LVIRQALLGPDAKADELNVVQVETMSLQESVKIPVAVLKAGETRHARLDFEFPDAPVIFT 285
+VI+Q LLG +AK +E NVV+V T ++SV+IP+AVLKAGETR D EF ++ V F
Sbjct: 1 MVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFK 58
Query: 286 LIQGSGPVHLIGHHL 330
LI+GSGPV++ GH++
Sbjct: 59 LIKGSGPVYIHGHNI 73
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 43 ESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSLQESVKIPVAVLK 222
E +SE D E + + ++ K +IR+ L + E+ +++ + + SVKI L
Sbjct: 9627 EVFESEAVDEEGRLKMIKTKKRIIRKPALDNTEEVTEIGIIEQDNVEPIYSVKIQERPLT 9686
Query: 223 AGETRHARLDFEFPD 267
+ ++L E P+
Sbjct: 9687 ESKPEDSKL-IELPE 9700
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 43 ESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSLQESVKIPVAVLK 222
E +SE D E + + ++ K +IR+ L + E+ +++ + + SVKI L
Sbjct: 11473 EVFESEAVDEEGRLKMIKTKKRIIRKPALDNTEEVTEIGIIEQDNVEPIYSVKIQERPLT 11532
Query: 223 AGETRHARLDFEFPD 267
+ ++L E P+
Sbjct: 11533 ESKPEDSKL-IELPE 11546
>X79243-1|CAA55830.1| 1213|Drosophila melanogaster dTAF II 150
protein.
Length = 1213
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 1 ARGTYEYFYGVTLSESHQSETWDPEAKAEY 90
+R E F+G ++ H S+TW + AEY
Sbjct: 339 SRAVAEQFFGCFITSHHWSDTWLAKGIAEY 368
>AY089287-1|AAL90025.1| 726|Drosophila melanogaster AT08349p
protein.
Length = 726
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +1
Query: 7 GTYEYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSL 186
G + Y SE + T++ + ++ + + I++ L D E VQ+E SL
Sbjct: 14 GLFSSLYSFISSEGQREPTYEEQ---DFIKLGRKCIKECQL--DQMLQESKFVQLE--SL 66
Query: 187 QESVKIPVAVLKAGETRHARLDFEFPDAPVIF 282
QE +K +A+LKA + H + + + +F
Sbjct: 67 QELLKCVLALLKAPQ-GHKSIGLPYAEDQTVF 97
>AY070564-1|AAL48035.1| 1221|Drosophila melanogaster LD43729p
protein.
Length = 1221
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 1 ARGTYEYFYGVTLSESHQSETWDPEAKAEY 90
+R E F+G ++ H S+TW + AEY
Sbjct: 339 SRAVAEQFFGCFITSHHWSDTWLAKGIAEY 368
>AE014296-1772|AAF50190.2| 1221|Drosophila melanogaster CG6711-PA
protein.
Length = 1221
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 1 ARGTYEYFYGVTLSESHQSETWDPEAKAEY 90
+R E F+G ++ H S+TW + AEY
Sbjct: 339 SRAVAEQFFGCFITSHHWSDTWLAKGIAEY 368
>AE013599-1448|AAM68666.1| 1740|Drosophila melanogaster CG8487-PA,
isoform A protein.
Length = 1740
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +1
Query: 7 GTYEYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSL 186
G + Y SE + T++ + ++ + + I++ L D E VQ+E SL
Sbjct: 1029 GLFSSLYSFISSEGQREPTYEEQ---DFIKLGRKCIKECQL--DQMLQESKFVQLE--SL 1081
Query: 187 QESVKIPVAVLKAGETRHARLDFEFPDAPVIF 282
QE +K +A+LKA + H + + + +F
Sbjct: 1082 QELLKCVLALLKAPQ-GHKSIGLPYAEDQTVF 1112
>AE013599-1447|AAF58532.2| 1983|Drosophila melanogaster CG8487-PB,
isoform B protein.
Length = 1983
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +1
Query: 7 GTYEYFYGVTLSESHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKADELNVVQVETMSL 186
G + Y SE + T++ + ++ + + I++ L D E VQ+E SL
Sbjct: 1029 GLFSSLYSFISSEGQREPTYEEQ---DFIKLGRKCIKECQL--DQMLQESKFVQLE--SL 1081
Query: 187 QESVKIPVAVLKAGETRHARLDFEFPDAPVIF 282
QE +K +A+LKA + H + + + +F
Sbjct: 1082 QELLKCVLALLKAPQ-GHKSIGLPYAEDQTVF 1112
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 286 LIQGSGPVHLIGHH 327
L++G G VHL+GHH
Sbjct: 1816 LLRGMGLVHLVGHH 1829
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.316 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,367,617
Number of Sequences: 53049
Number of extensions: 301481
Number of successful extensions: 830
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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