Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K23
         (257 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    27   1.8  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    27   1.8  
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    26   4.2  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    26   4.2  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF003386-2|AAB54255.1|  527|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF003386-1|AAK82899.1|  529|Caenorhabditis elegans Hypothetical ...    26   4.2  
Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical pr...    25   7.4  
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical pr...    25   9.8  
Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical pr...    25   9.8  
AF099915-8|AAC68768.2|  231|Caenorhabditis elegans Hypothetical ...    25   9.8  
AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine re...    25   9.8  
AF016444-1|AAN73876.2|  330|Caenorhabditis elegans Serpentine re...    25   9.8  

>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
          protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 85 VTQIL*LLLFFCVEILNLKKILF 17
          V++++ L  FFCV+ILN   I F
Sbjct: 13 VSKLMVLCKFFCVDILNFTSIFF 35


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
          protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 85 VTQIL*LLLFFCVEILNLKKILF 17
          V++++ L  FFCV+ILN   I F
Sbjct: 13 VSKLMVLCKFFCVDILNFTSIFF 35


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +E+ NL K+LFCF LV
Sbjct: 346 LEVNNLTKLLFCFVLV 361


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +E+ NL K+LFCF LV
Sbjct: 310 LEVNNLTKLLFCFVLV 325


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +E+ NL K+LFCF LV
Sbjct: 349 LEVNNLTKLLFCFVLV 364


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +E+ NL K+LFCF LV
Sbjct: 346 LEVNNLTKLLFCFVLV 361


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +E+ NL K+LFCF LV
Sbjct: 310 LEVNNLTKLLFCFVLV 325


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +E+ NL K+LFCF LV
Sbjct: 349 LEVNNLTKLLFCFVLV 364


>AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.4a protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
 Frame = +3

Query: 165 PLSKKYLLIDF--------HVTFHNGTSRSSK 236
           PL  +YLL+D         H TFH GTS  SK
Sbjct: 347 PLPVEYLLVDVPAGMPKEPHYTFHVGTSNKSK 378


>AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.4b protein.
          Length = 529

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
 Frame = +3

Query: 165 PLSKKYLLIDF--------HVTFHNGTSRSSK 236
           PL  +YLL+D         H TFH GTS  SK
Sbjct: 347 PLPVEYLLVDVPAGMPKEPHYTFHVGTSNKSK 378


>AF003386-2|AAB54255.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.5a protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
 Frame = +3

Query: 165 PLSKKYLLIDF--------HVTFHNGTSRSSK 236
           PL  +YLL+D         H TFH GTS  SK
Sbjct: 347 PLPVEYLLVDVPAGMPKEPHYTFHVGTSNKSK 378


>AF003386-1|AAK82899.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.5b protein.
          Length = 529

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 8/32 (25%)
 Frame = +3

Query: 165 PLSKKYLLIDF--------HVTFHNGTSRSSK 236
           PL  +YLL+D         H TFH GTS  SK
Sbjct: 347 PLPVEYLLVDVPAGMPKEPHYTFHVGTSNKSK 378


>Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical
           protein F44F1.5 protein.
          Length = 645

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 67  LLLFFCVEILNLKKILFCF 11
           ++LFF  E  N   +LFCF
Sbjct: 622 IVLFFYAEFCNFFNVLFCF 640


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 49  VEILNLKKILFCFYLV 2
           +EI NL K+LFCF L+
Sbjct: 339 LEINNLTKLLFCFVLL 354


>Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical
           protein T03F7.7b protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -2

Query: 232 EDREVPL*KVT*KSISKYFFD---NGNKSEIYLIEIKCVYLYENNRLLIYYKVTQI 74
           E  +V +  V  K  S +FF    N N  ++     K + L+E+ +L+ Y K+  +
Sbjct: 20  EKLKVSIPSVPDKIDSPFFFARFLNANNGDVEKTRQKIIQLFEHRKLMGYEKINDL 75


>Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical
           protein T03F7.7a protein.
          Length = 368

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -2

Query: 232 EDREVPL*KVT*KSISKYFFD---NGNKSEIYLIEIKCVYLYENNRLLIYYKVTQI 74
           E  +V +  V  K  S +FF    N N  ++     K + L+E+ +L+ Y K+  +
Sbjct: 20  EKLKVSIPSVPDKIDSPFFFARFLNANNGDVEKTRQKIIQLFEHRKLMGYEKINDL 75


>AF099915-8|AAC68768.2|  231|Caenorhabditis elegans Hypothetical
           protein E02H9.2 protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 40  GFQHRKKVIIIGFELLYNRLEVDCFHIN 123
           G+ H KK  ++  EL  N L   C H N
Sbjct: 5   GYPHNKKYTVLESELHRNNLFQKCSHPN 32


>AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein50 protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -2

Query: 151 IYLIEIKCVYLYENNRLLIYYKVTQIL*LLLFFCVEILNLKKILFCFYLV 2
           +YLI  +    + N R ++ +  T  L   +F  V  +++    +CFYL+
Sbjct: 26  VYLIFTEKAAKFGNYRFILLFFATYNLTFSVFNIVFPMDIHTYRYCFYLM 75


>AF016444-1|AAN73876.2|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 9 protein.
          Length = 330

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 61  VIIIGFELLYNRLEVDCFHINIHI*FQLGKFPICFRCQKNI 183
           +II     L+N      FHIN+ I FQ+  F     C   I
Sbjct: 37  MIIAASYALWNARVSKLFHINVIIIFQVHLFGFFIHCLNRI 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,169,384
Number of Sequences: 27780
Number of extensions: 87240
Number of successful extensions: 166
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)