Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K21
         (372 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          20   8.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   8.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   8.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 16/67 (23%), Positives = 31/67 (46%)
 Frame = +1

Query: 133 PTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSD 312
           P  P  +K +  TT  +++ +        IK  E      D+  PE    E++  ++D D
Sbjct: 276 PATPKGSKCSMITTPEIKKEVEDMEYD-DIKT-ELSTGMNDDIPPETEEEEENDKKLDLD 333

Query: 313 TNDMLKM 333
           + DM+++
Sbjct: 334 SIDMMQL 340


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 99  GIEVKSKPSVVFFDYNLRRFFYGLSPNTT 13
           GI  K     V++DY    +F  LSPN T
Sbjct: 60  GIHRKKVLLSVWWDYKGIVYFELLSPNRT 88


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 348 VTEVKHLQHIIGVRIDFNDILF*SRYFWDIIVTPFTLLF 232
           +TEV  L  I+G  +     L    Y   + V  F +LF
Sbjct: 745 ITEVMMLGSIVGTPVHMAPELLSGHYDSSVDVYAFGILF 783


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 348 VTEVKHLQHIIGVRIDFNDILF*SRYFWDIIVTPFTLLF 232
           +TEV  L  I+G  +     L    Y   + V  F +LF
Sbjct: 783 ITEVMMLGSIVGTPVHMAPELLSGHYDSSVDVYAFGILF 821


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,384
Number of Sequences: 438
Number of extensions: 1914
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)