Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K19
(329 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 131 1e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 131 1e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 131 1e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 131 1e-31
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 112 5e-26
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 111 2e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 110 2e-25
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 110 2e-25
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 109 5e-25
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 109 5e-25
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 106 4e-24
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 106 4e-24
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 102 7e-23
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 102 7e-23
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 93 3e-20
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 73 5e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 64 2e-11
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 64 3e-11
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 64 3e-11
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 62 9e-11
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 62 1e-10
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 58 1e-09
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 52 1e-07
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 52 1e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 33 0.064
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 33 0.064
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 29 0.79
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 28 1.4
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 3.2
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 3.2
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 3.2
Z81584-7|CAE17905.1| 202|Caenorhabditis elegans Hypothetical pr... 27 4.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 4.2
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 26 5.5
AF022971-11|AAZ32813.1| 265|Caenorhabditis elegans Hypothetical... 26 5.5
AF003136-6|AAK21375.2| 384|Caenorhabditis elegans Hypothetical ... 26 5.5
Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical pr... 26 7.3
AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical ... 26 7.3
Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical p... 25 9.7
Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical p... 25 9.7
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 25 9.7
AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical ... 25 9.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 131 bits (317), Expect = 1e-31
Identities = 56/68 (82%), Positives = 64/68 (94%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ VPRAV VDLEPTV+DE+RTGTYR LF
Sbjct: 28 HGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLF 87
Query: 305 HPEQLITG 328
HPEQLITG
Sbjct: 88 HPEQLITG 95
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 131 bits (317), Expect = 1e-31
Identities = 56/68 (82%), Positives = 64/68 (94%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ VPRAV VDLEPTV+DE+RTGTYR LF
Sbjct: 27 HGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLF 86
Query: 305 HPEQLITG 328
HPEQLITG
Sbjct: 87 HPEQLITG 94
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 15 IGNACWELYCL 25
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 131 bits (317), Expect = 1e-31
Identities = 56/68 (82%), Positives = 64/68 (94%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ VPRAV VDLEPTV+DE+RTGTYR LF
Sbjct: 28 HGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLF 87
Query: 305 HPEQLITG 328
HPEQLITG
Sbjct: 88 HPEQLITG 95
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 131 bits (317), Expect = 1e-31
Identities = 56/68 (82%), Positives = 64/68 (94%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ VPRAV VDLEPTV+DE+RTGTYR LF
Sbjct: 28 HGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLF 87
Query: 305 HPEQLITG 328
HPEQLITG
Sbjct: 88 HPEQLITG 95
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 112 bits (270), Expect = 5e-26
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGI PDG MP D + G D S+NTFFSET +GK VPRA+FVDLEPTV+DEVRTGTY +LF
Sbjct: 28 HGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLF 87
Query: 305 HPEQLITG 328
HPEQLI+G
Sbjct: 88 HPEQLISG 95
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 111 bits (266), Expect = 2e-25
Identities = 48/68 (70%), Positives = 57/68 (83%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG + + ++G DDSFNTFFSET AGK VPRA+ VDLEPT +DE+RTGTY+ LF
Sbjct: 33 HGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLF 92
Query: 305 HPEQLITG 328
HPEQL+TG
Sbjct: 93 HPEQLLTG 100
Score = 30.7 bits (66), Expect = 0.26
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
+GNACWELYCL
Sbjct: 21 MGNACWELYCL 31
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 110 bits (265), Expect = 2e-25
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG MPT T G +SF TFFS+TG+G+ VPR++FVDLEPTVVDE+RTGTY++LF
Sbjct: 28 HGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLF 85
Query: 305 HPEQLITG 328
HPEQ+ITG
Sbjct: 86 HPEQMITG 93
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 110 bits (265), Expect = 2e-25
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG MPT T G +SF TFFS+TG+G+ VPR++FVDLEPTVVDE+RTGTY++LF
Sbjct: 28 HGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLF 85
Query: 305 HPEQLITG 328
HPEQ+ITG
Sbjct: 86 HPEQMITG 93
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 109 bits (262), Expect = 5e-25
Identities = 48/68 (70%), Positives = 59/68 (86%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG MP+D+ G +SF TFFS+TG G+ VPR++FVDLEPTVVDE+RTGTY++LF
Sbjct: 28 HGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLF 85
Query: 305 HPEQLITG 328
HPEQ+ITG
Sbjct: 86 HPEQMITG 93
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 109 bits (262), Expect = 5e-25
Identities = 48/68 (70%), Positives = 59/68 (86%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG MP+D+ G +SF TFFS+TG G+ VPR++FVDLEPTVVDE+RTGTY++LF
Sbjct: 28 HGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLF 85
Query: 305 HPEQLITG 328
HPEQ+ITG
Sbjct: 86 HPEQMITG 93
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (254), Expect = 4e-24
Identities = 47/68 (69%), Positives = 58/68 (85%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG MP+++ GG SF TFFS+TG G+ VPR++FVDLEPTVVDE+RTG Y++LF
Sbjct: 28 HGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLF 85
Query: 305 HPEQLITG 328
HPEQ+ITG
Sbjct: 86 HPEQMITG 93
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (254), Expect = 4e-24
Identities = 47/68 (69%), Positives = 58/68 (85%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG MP+++ GG SF TFFS+TG G+ VPR++FVDLEPTVVDE+RTG Y++LF
Sbjct: 28 HGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLF 85
Query: 305 HPEQLITG 328
HPEQ+ITG
Sbjct: 86 HPEQMITG 93
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 102 bits (244), Expect = 7e-23
Identities = 46/68 (67%), Positives = 52/68 (76%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG D T ++ NTFF+ET GK VPR +FVDLEPTVVDEVRTGTYR LF
Sbjct: 34 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 93
Query: 305 HPEQLITG 328
HPEQL++G
Sbjct: 94 HPEQLLSG 101
Score = 30.3 bits (65), Expect = 0.34
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWEL+CL
Sbjct: 22 IGNACWELFCL 32
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 102 bits (244), Expect = 7e-23
Identities = 46/68 (67%), Positives = 52/68 (76%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG D T ++ NTFF+ET GK VPR +FVDLEPTVVDEVRTGTYR LF
Sbjct: 6 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 65
Query: 305 HPEQLITG 328
HPEQL++G
Sbjct: 66 HPEQLLSG 73
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 93.5 bits (222), Expect = 3e-20
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGI PDG T G S TFFS+TG G+ VPR++FVDLEPTVVDE+RTG Y++LF
Sbjct: 28 HGILPDG---TSMEPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLF 84
Query: 305 HPEQLITG 328
HPEQ++TG
Sbjct: 85 HPEQMLTG 92
Score = 31.9 bits (69), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 91 IGNACWELYCL 123
IGNACWELYCL
Sbjct: 16 IGNACWELYCL 26
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 72.9 bits (171), Expect = 5e-14
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +2
Query: 113 CIA*HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTY 292
CI HG+ G + ++ S FFSE+ GK VPRA++VDLEPTV+DE+R G Y
Sbjct: 29 CIE-HGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVY 86
Query: 293 RQLFHPEQLITG 328
LFHP+Q+I G
Sbjct: 87 GNLFHPDQIING 98
Score = 32.7 bits (71), Expect = 0.064
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Frame = +1
Query: 55 REC-SLSVAKPES-IGNACWELYCL 123
REC S+ + + + IGNACWELYC+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCI 30
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG + + + N +++E GK VPRAV VDLEP +D VR+G + QLF
Sbjct: 28 HGIQPDGTYKGESDLQL--ERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 305 HPEQLITG 328
P+ + G
Sbjct: 86 RPDNFVFG 93
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 63.7 bits (148), Expect = 3e-11
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGI P GQ D + + N +++E G+ K VPRAV VDLEP +D VR+G + QLF
Sbjct: 28 HGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 305 HPEQLITG 328
P+ + G
Sbjct: 86 RPDNYVFG 93
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 63.7 bits (148), Expect = 3e-11
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGI P GQ D + + N +++E G+ K VPRAV VDLEP +D VR+G + QLF
Sbjct: 28 HGIDPSGQYVGDSDLQL--ERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 305 HPEQLITG 328
P+ + G
Sbjct: 86 RPDNYVFG 93
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 62.1 bits (144), Expect = 9e-11
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG + + + + +++E GK VPRAV VDLEP +D VR+G + QLF
Sbjct: 28 HGIQPDGTFKGESDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 305 HPEQLITG 328
P+ + G
Sbjct: 86 RPDNFVFG 93
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 61.7 bits (143), Expect = 1e-10
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGIQPDG + + + + +++E GK VPRAV VDLEP +D VR+G + QLF
Sbjct: 28 HGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 305 HPEQLITG 328
P+ + G
Sbjct: 86 RPDNFVFG 93
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 58.4 bits (135), Expect = 1e-09
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HGI P G D + + N +++E GK VPRA VDLEP +D VR G + QLF
Sbjct: 28 HGIDPTGAYNGDSDLQL--ERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLF 85
Query: 305 HPEQLITG 328
P+ + G
Sbjct: 86 RPDNFVFG 93
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HG+Q DG D G + +++ E K VPRA+ VDL+P ++ VR+ Y +LF
Sbjct: 28 HGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLF 85
Query: 305 HPEQLITG 328
PE ++G
Sbjct: 86 DPENAVSG 93
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLF 304
HG+Q DG D G + +++ E K VPRA+ VDL+P ++ VR+ Y +LF
Sbjct: 28 HGLQTDGTYKGDN--GSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLF 85
Query: 305 HPEQLITG 328
PE ++G
Sbjct: 86 DPENAVSG 93
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.064
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVD-EVRTGTYRQL 301
HGI GQ + + +D + F + VPRAV VDLEP V++ +++ + L
Sbjct: 31 HGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNL 87
Query: 302 FHPEQL 319
F+ + +
Sbjct: 88 FNTDNI 93
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.064
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 125 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKDVPRAVFVDLEPTVVD-EVRTGTYRQL 301
HGI GQ + + +D + F + VPRAV VDLEP V++ +++ + L
Sbjct: 31 HGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNL 87
Query: 302 FHPEQL 319
F+ + +
Sbjct: 88 FNTDNI 93
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 29.1 bits (62), Expect = 0.79
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +3
Query: 6 LIKFIYLHLVKNSIQNA*VLSVRGQAGVNRKCLLGAVLLSTASNLMVRCQLTRPSGVETT 185
LIK H + + Q RG A N + A ST + + C + P+ TT
Sbjct: 1101 LIKTANSHQIYGNGQLLINFGYRGTASQNLIGSMIAYRESTIDTVSMAC-VRPPTTPTTT 1159
Query: 186 PSTRSSARPELARTFPVPSSS 248
ST ++ P+L T +PS+S
Sbjct: 1160 TSTTTTTTPKLTTTSTLPSTS 1180
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 111 AVLLSTASNLMVRCQLTRPSGVETTPSTRSSARPELARTFPVPSSSILNPL*LTRSALAH 290
AV+ + A T P + T + +PE+A T P PS++ PL +A
Sbjct: 166 AVITTEAKIFTTEAIATTPRAIPPAVVTTEATQPEVATTLPEPSTT-SEPLTSAPRMVAT 224
Query: 291 TDS 299
TD+
Sbjct: 225 TDA 227
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 194 TFFSETGAGKDVPRAVFVDLEPTVVD 271
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 194 TFFSETGAGKDVPRAVFVDLEPTVVD 271
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 194 TFFSETGAGKDVPRAVFVDLEPTVVD 271
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>Z81584-7|CAE17905.1| 202|Caenorhabditis elegans Hypothetical
protein T04C12.7 protein.
Length = 202
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/58 (24%), Positives = 19/58 (32%)
Frame = -1
Query: 302 TTVCMCQCGPRQLQWVQDRRRRHGERPCQLXXXXXXXXXXRLHPRWSCQLASDHQVGC 129
T C+C C P + W H C L+ W C + S +GC
Sbjct: 120 TFCCLCMCIPIGILWTMQIYDNH--ENCDNLTYWTAFSVSILYLCWMCLMVSVCLLGC 175
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 143 GQMPTDKTIGGGDDSFNTFFSE-TGAGKDVPRAVFVDLEPTVVDEVRTGT 289
GQMPTDK + S NT +S+ T A + + + P+ V V T
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSDVTTAPQACDKTIIQSDCPSTVAPVTCST 205
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 142 IRLDAVLSNTAPSRHFRLTPAWPRTESTHAFCIEFLTK 29
++LD L AP L P PR + T A C E ++K
Sbjct: 553 VKLDDELEKIAPGFEEPLIPQAPRDDGTLAECSEEVSK 590
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 142 IRLDAVLSNTAPSRHFRLTPAWPRTESTHAFCIEFLTK 29
++LD L AP L P PR + T A C E ++K
Sbjct: 553 VKLDDELEKIAPGFEEPLIPQAPRDDGTLAECSEEVSK 590
>AF022971-11|AAZ32813.1| 265|Caenorhabditis elegans Hypothetical
protein C31B8.16 protein.
Length = 265
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 228 TSLPAPVSLKNVLKESSPPPMVLS 157
T + P+S+ NV+ SSP P +LS
Sbjct: 219 TDVSVPISIANVIFASSPIPAMLS 242
>AF003136-6|AAK21375.2| 384|Caenorhabditis elegans Hypothetical
protein F28B3.3 protein.
Length = 384
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 165 PSGVETTPSTRSSARPELART 227
PSGV TPS++ P+L+RT
Sbjct: 53 PSGVARTPSSQLPPSPKLSRT 73
>Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical
protein T25B9.5 protein.
Length = 541
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 153 QLTRPSGVETTPSTRSSARPELARTFPVPSSS 248
Q+T P+G+ +PST +SA+P + T SSS
Sbjct: 500 QVTLPAGMSISPST-NSAKPPSSETPNTGSSS 530
>AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical
protein Y69E1A.3 protein.
Length = 563
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 153 QLTRPSGVETTPSTRSSARPELARTFPVPSSS 248
Q+T P+G+ +PST +SA+P + T SSS
Sbjct: 522 QVTLPAGMSISPST-NSAKPPSSETPNTGSSS 552
>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical protein
C26H9A.2 protein.
Length = 1334
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 197 FFSETGAGKDVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 322
F +E + RAV V L+P + +T + LFH E+++
Sbjct: 1201 FLAEEPMTAETVRAV-VQLQPHYIGNYQTASTAPLFHEEKIV 1241
>Z69904-10|CAA93782.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 156 LTRPSGVETTP-STRSSARPELARTFPVPSSSILNP 260
LT P ET +T + +PE A F P+ S +NP
Sbjct: 712 LTDPHSPETARVNTVLTNQPEFAEAFKCPAGSPMNP 747
>Z69902-13|CAA93770.2| 754|Caenorhabditis elegans Hypothetical
protein ZK20.6 protein.
Length = 754
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 156 LTRPSGVETTP-STRSSARPELARTFPVPSSSILNP 260
LT P ET +T + +PE A F P+ S +NP
Sbjct: 712 LTDPHSPETARVNTVLTNQPEFAEAFKCPAGSPMNP 747
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 231 GTSLPAPVSLKNVLKESSPPPMVLSVGI 148
G S+P+ S +L++ +PPP +V +
Sbjct: 284 GNSMPSSCSSSGILQDQAPPPHPTTVDL 311
>AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical
protein F56D12.6a protein.
Length = 968
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 231 GTSLPAPVSLKNVLKESSPPPMVLSVGI 148
G S+P+ S +L++ +PPP +V +
Sbjct: 301 GNSMPSSCSSSGILQDQAPPPHPTTVDL 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,076,511
Number of Sequences: 27780
Number of extensions: 170295
Number of successful extensions: 591
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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