Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K18
(257 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 1.8
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 20 4.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 20 5.6
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 5.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 20 5.6
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 19 7.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 19 7.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 19 7.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 19 7.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 19 7.4
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 19 9.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 9.8
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.4 bits (43), Expect = 1.8
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 98 VTSQLPTLSFML-----YFGCTTFYSVYIILFSFYRT 193
V + LP +S++ + GCT F ++ F+F T
Sbjct: 281 VENSLPKVSYIKASEIWFLGCTIFLFAAMVEFAFVNT 317
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.2 bits (40), Expect = 4.3
Identities = 5/23 (21%), Positives = 13/23 (56%)
Frame = +3
Query: 21 VLVIIEHVCW*AYATHAPSHWIN 89
+++ + +CW Y + +WI+
Sbjct: 264 IIIAVFFICWTPYYVMSLWYWID 286
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 19.8 bits (39), Expect = 5.6
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +3
Query: 18 CVLVIIEHVCW*AYATHAPSHWI 86
CV V++ +V + + TH + W+
Sbjct: 319 CVTVVVLNVHFRSPQTHVMAPWV 341
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 19.8 bits (39), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 152 FYSVYIILFSFY 187
FY +Y L SFY
Sbjct: 201 FYQIYATLGSFY 212
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.8 bits (39), Expect = 5.6
Identities = 9/38 (23%), Positives = 17/38 (44%)
Frame = +2
Query: 125 FMLYFGCTTFYSVYIILFSFYRTSIKLMVSGDSV*NKG 238
+++Y +FY +++ FY VS N+G
Sbjct: 247 YVVYSALGSFYIPMLVMLFFYWRIYNAAVSTTKAINQG 284
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 19.4 bits (38), Expect = 7.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 89 HADVTSQLPTLSFMLYFGCTTFYSVYIILFSFYRTSIKL 205
HA + Q+ F LY +YI FS+++ ++L
Sbjct: 111 HAIIACQM---EFQLYPMDIQICPIYIESFSYHKQKLRL 146
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 7.4
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +3
Query: 18 CVLVIIEHVCW*AYATHAPSHWI 86
CV V++ +V + + TH + W+
Sbjct: 323 CVTVVVLNVHFRSPQTHKMAPWV 345
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 7.4
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +3
Query: 18 CVLVIIEHVCW*AYATHAPSHWI 86
CV V++ +V + + TH + W+
Sbjct: 323 CVTVVVLNVHFRSPQTHKMAPWV 345
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 19.4 bits (38), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 116 TLSFMLYFGCTTFYSVYIILFSFYRTSIKLMVSGDSV*NKGS 241
+LS + C +YIILF + + + GD +GS
Sbjct: 745 SLSATVTLVCLYSPKIYIILFQPDKNIRRKVTMGDKSKKQGS 786
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 19.4 bits (38), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 116 TLSFMLYFGCTTFYSVYIILFSFYRTSIKLMVSGDSV*NKGS 241
+LS + C +YIILF + + + GD +GS
Sbjct: 835 SLSATVTLVCLYSPKIYIILFQPDKNIRRKVTMGDKSKKQGS 876
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 19.0 bits (37), Expect = 9.8
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +3
Query: 66 HAPSHWINTP 95
H P HW+ P
Sbjct: 32 HIPEHWLVYP 41
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.0 bits (37), Expect = 9.8
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = +3
Query: 66 HAPSHWINTPT 98
H P WI PT
Sbjct: 703 HVPPRWIVEPT 713
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,404
Number of Sequences: 438
Number of extensions: 835
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4636803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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