Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K17
         (306 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14247-1|CAA32463.1|  114|Drosophila melanogaster ribosomal prot...   168   1e-42
X13625-1|CAB38441.1|  114|Drosophila melanogaster protein ( Dros...   168   1e-42
AY069761-1|AAL39906.1|  114|Drosophila melanogaster RE01079p pro...   168   1e-42
AE014134-2931|AAN11005.1|  114|Drosophila melanogaster CG10305-P...   168   1e-42
AE014134-2930|AAF53666.1|  114|Drosophila melanogaster CG10305-P...   168   1e-42
AE014134-2929|AAN11004.1|  114|Drosophila melanogaster CG10305-P...   168   1e-42
AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p pro...    28   2.6  
AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-P...    28   2.6  

>X14247-1|CAA32463.1|  114|Drosophila melanogaster ribosomal protein
           S31 protein.
          Length = 114

 Score =  168 bits (409), Expect = 1e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +3

Query: 45  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVFT 224
           MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI EAS++ 
Sbjct: 1   MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60

Query: 225 SFQLPKLYAKLHYCVSCAIHSKVVRNR 305
           S+ LPKLYAKLHYCVSCAIHSKVVRNR
Sbjct: 61  SYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>X13625-1|CAB38441.1|  114|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for putative ribosomal
           protein S31. ).
          Length = 114

 Score =  168 bits (409), Expect = 1e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +3

Query: 45  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVFT 224
           MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI EAS++ 
Sbjct: 1   MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60

Query: 225 SFQLPKLYAKLHYCVSCAIHSKVVRNR 305
           S+ LPKLYAKLHYCVSCAIHSKVVRNR
Sbjct: 61  SYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AY069761-1|AAL39906.1|  114|Drosophila melanogaster RE01079p
           protein.
          Length = 114

 Score =  168 bits (409), Expect = 1e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +3

Query: 45  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVFT 224
           MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI EAS++ 
Sbjct: 1   MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60

Query: 225 SFQLPKLYAKLHYCVSCAIHSKVVRNR 305
           S+ LPKLYAKLHYCVSCAIHSKVVRNR
Sbjct: 61  SYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AE014134-2931|AAN11005.1|  114|Drosophila melanogaster CG10305-PC,
           isoform C protein.
          Length = 114

 Score =  168 bits (409), Expect = 1e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +3

Query: 45  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVFT 224
           MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI EAS++ 
Sbjct: 1   MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60

Query: 225 SFQLPKLYAKLHYCVSCAIHSKVVRNR 305
           S+ LPKLYAKLHYCVSCAIHSKVVRNR
Sbjct: 61  SYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AE014134-2930|AAF53666.1|  114|Drosophila melanogaster CG10305-PB,
           isoform B protein.
          Length = 114

 Score =  168 bits (409), Expect = 1e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +3

Query: 45  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVFT 224
           MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI EAS++ 
Sbjct: 1   MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60

Query: 225 SFQLPKLYAKLHYCVSCAIHSKVVRNR 305
           S+ LPKLYAKLHYCVSCAIHSKVVRNR
Sbjct: 61  SYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AE014134-2929|AAN11004.1|  114|Drosophila melanogaster CG10305-PA,
           isoform A protein.
          Length = 114

 Score =  168 bits (409), Expect = 1e-42
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +3

Query: 45  MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVFT 224
           MT+KRRNGGR KH RGHVK VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI EAS++ 
Sbjct: 1   MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60

Query: 225 SFQLPKLYAKLHYCVSCAIHSKVVRNR 305
           S+ LPKLYAKLHYCVSCAIHSKVVRNR
Sbjct: 61  SYVLPKLYAKLHYCVSCAIHSKVVRNR 87


>AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p
           protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 72  RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 173
           +A H  G V  V+CT C R +  +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498


>AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-PA
           protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 72  RAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRN 173
           +A H  G V  V+CT C R +  +++++K + R+
Sbjct: 465 KALHPDGPVAEVQCTLCGRWLRDERSLRKHLARH 498


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,840,741
Number of Sequences: 53049
Number of extensions: 196101
Number of successful extensions: 636
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)