Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K16
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0569 + 18844910-18845249,18845353-18845471,18846557-18846568 30 0.60
12_02_1192 - 26884474-26885266,26885430-26885895,26886333-26886561 27 4.2
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 27 4.2
07_03_1347 + 25932185-25932748,25933151-25933755,25935797-259362... 27 4.2
05_02_0099 - 6582498-6582725,6583148-6583235,6583437-6583830,658... 27 5.6
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 27 5.6
01_06_0427 - 29273872-29273966,29275507-29275609,29275702-29276058 27 5.6
05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417... 26 7.4
04_04_0074 - 22537559-22537951,22539143-22539271,22540410-225405... 26 7.4
04_03_0891 - 20588648-20589100,20589188-20589397 26 7.4
04_01_0615 - 8060085-8060972 26 7.4
03_02_1029 - 13488535-13493037 26 7.4
12_02_0469 - 19424703-19424906,19425073-19425142,19425409-194263... 26 9.8
05_04_0132 + 18303925-18307164 26 9.8
05_01_0190 + 1366791-1366817,1367536-1367616,1367858-1367900,136... 26 9.8
05_01_0106 + 702504-702687,702856-703037,703070-703933 26 9.8
04_04_0224 - 23738105-23738273,23738364-23738472,23738702-237388... 26 9.8
02_05_0897 + 32603060-32603387,32604348-32604589,32604681-326048... 26 9.8
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571... 26 9.8
>10_08_0569 + 18844910-18845249,18845353-18845471,18846557-18846568
Length = 156
Score = 29.9 bits (64), Expect = 0.60
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = -2
Query: 274 GEPLLSKVTPSIKVISLFD-LKVSAYFKTFSLRHIYTSSSTQS--LTMPKTLPPIPRSVD 104
G+ L ++ P + V+ L D ++ Y + R Y+SSS+ S P+ PP P +
Sbjct: 13 GDVLTFRLHP-LAVLKLSDRIREFQYQAAAAARVSYSSSSSSSSGTAAPEDPPPPPTRMS 71
Query: 103 SCSVGIXXXXXXXXXXXXXTLISF--DPATLRKLLV 2
C +G+ LI DPAT + L+
Sbjct: 72 GCVIGVRRGGTVDVSDILDILILHGPDPATFDRALL 107
>12_02_1192 - 26884474-26885266,26885430-26885895,26886333-26886561
Length = 495
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 253 PWRAKVRQGPHVLGSRCPMSRKRERH 330
PW KVR PH+ S P + + H
Sbjct: 74 PWTQKVRNPPHLFSSSAPEYKDAKLH 99
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 27.1 bits (57), Expect = 4.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 165 DVYM-CLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAWEPLSDEPKAREAQVES 341
DV++ CLKE + ETL + EI + DG G SA+ S E + E+
Sbjct: 197 DVHLSCLKELMSHSHETLTNLYEILMEDGTPTNDCGEGASAQDNSSYSGESNGDAEEFEN 256
Query: 342 R 344
+
Sbjct: 257 Q 257
>07_03_1347 +
25932185-25932748,25933151-25933755,25935797-25936214,
25936433-25936555,25936775-25936989,25937157-25937412,
25937844-25938149,25938764-25938820,25939635-25939685
Length = 864
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 169 TSSSTQSLTMPKTLPPIPRSVDSCSVGI 86
+S+ST S T+ + PP PRS+ SC I
Sbjct: 6 SSTSTPSSTIERLRPPYPRSI-SCHASI 32
>05_02_0099 -
6582498-6582725,6583148-6583235,6583437-6583830,
6585855-6585990,6586413-6586931
Length = 454
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 214 KVSAYFKTFSL-RHIYTSSSTQSLTMPKTLPPIPRSVDSCSVG 89
KVS + L +H SSS+ MP LPP P S ++ ++G
Sbjct: 46 KVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLG 88
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 26.6 bits (56), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 105 IPVRWASRAPPRLKVGQPRKPS 40
+P A+R P R+K+GQP+ P+
Sbjct: 80 LPQPSAARKPLRIKIGQPKLPT 101
>01_06_0427 - 29273872-29273966,29275507-29275609,29275702-29276058
Length = 184
Score = 26.6 bits (56), Expect = 5.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 207 ETLRSKREITLIDGVTLESKGSPRSARAWEPLSDEPKAREAQVE 338
+TL S RE DG L +KG + WE D A E ++
Sbjct: 134 KTLLSIREYYFKDGKELPAKGISLTVEQWEAFRDSVPAIEDAIK 177
>05_07_0173 +
28140484-28140869,28141079-28141481,28141719-28141781,
28142350-28142535,28144695-28145076,28145689-28145780,
28145988-28146737,28146969-28147100,28147149-28147247,
28147977-28148132,28150187-28150317,28150798-28151254,
28151327-28151668,28152137-28153001,28153112-28153170,
28153806-28154261,28154835-28154873,28155016-28155201
Length = 1727
Score = 26.2 bits (55), Expect = 7.4
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -2
Query: 268 PLLSKVTPSIKVISLFDLKVSAYFKTFSLRHIYTSSSTQSLTMP-KTLPPI--PRSVDSC 98
P + + TP I S + V AY++T H+ + S T P ++P + PRS S
Sbjct: 782 PYIEEPTPIILPSSHINESVDAYWETLEYCHLTAGFAKPSSTFPGYSVPEVSHPRSWSSL 841
Query: 97 SV 92
V
Sbjct: 842 RV 843
>04_04_0074 -
22537559-22537951,22539143-22539271,22540410-22540541,
22540546-22540996,22541301-22541443
Length = 415
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 228 EITLIDGVTLESKGSPRSARAW 293
EI L DGV ES+G R R W
Sbjct: 391 EIQLFDGVIGESRGLRRHVRMW 412
>04_03_0891 - 20588648-20589100,20589188-20589397
Length = 220
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 214 KVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRSVDSCSV 92
+V Y+KT H++T+ + +T+P LP I + SV
Sbjct: 81 RVGVYYKTL---HVFTTYREEPITVPVELPAIYQGHKDVSV 118
>04_01_0615 - 8060085-8060972
Length = 295
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 90 ASRAPPRLKVGQPRKPSYRS 31
+S APP +G PRKP +R+
Sbjct: 191 SSAAPPAWDLGGPRKPHFRA 210
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 320 RFRLIGQRLPSTCGPWRTFALQGDTINQSYLP 225
RFR G+ P GP+R A +G+ Q LP
Sbjct: 1367 RFRTKGKLAPRYVGPFRITARRGEVAYQLELP 1398
>12_02_0469 -
19424703-19424906,19425073-19425142,19425409-19426302,
19426975-19427124,19427382-19427572,19427713-19427835
Length = 543
Score = 25.8 bits (54), Expect = 9.8
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 228 EITLIDGVTLESKGSPRSARAWE 296
E +++D + + +KG+PRS + W+
Sbjct: 404 EGSVLDPICVATKGAPRSMKGWD 426
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 197 EICRDFEVEEGDNFD*WCHLG--EQRFAK 277
E+CR+ E++E NF C LG EQ A+
Sbjct: 430 EVCREQEMQEEKNFAAVCKLGIPEQELAE 458
>05_01_0190 +
1366791-1366817,1367536-1367616,1367858-1367900,
1368104-1368182,1368291-1368450,1368565-1368692,
1369134-1369202,1369796-1369883,1370516-1370591,
1370767-1370840,1372635-1372742,1373783-1373944,
1374179-1374283,1374447-1374527,1374603-1375803,
1376654-1376750,1378086-1378160,1378461-1378623
Length = 938
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 93 TEQESTDLGIGGSVLGIVKDCVDD 164
TE+ D G+G S LG++ + VDD
Sbjct: 643 TERYQEDAGVGTSGLGLLSNNVDD 666
>05_01_0106 + 702504-702687,702856-703037,703070-703933
Length = 409
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 75 PRLKVGQPRKPSYRSIQQPYESSS 4
PRL++G PR P S P SSS
Sbjct: 268 PRLQLGAPRAPRAASSSHPGASSS 291
>04_04_0224 -
23738105-23738273,23738364-23738472,23738702-23738804,
23738895-23738926,23739342-23739592,23739639-23739754,
23740271-23740526,23740760-23740847,23740985-23741062,
23741238-23741313,23741532-23741590,23742639-23742711
Length = 469
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = -1
Query: 338 LHLCLSRFRLIGQRLPSTCGPWRTFALQGDTINQSYLPLRPQSL 207
L C++ + G P C PW GD+ + Y Q L
Sbjct: 153 LSFCVAGYASGGMFAPGRCSPWEGNCSAGDSGREPYTACHHQLL 196
>02_05_0897 +
32603060-32603387,32604348-32604589,32604681-32604824,
32604889-32605050,32605129-32605212,32605528-32605601,
32605850-32606039,32606120-32606275,32606368-32606465,
32606976-32607102,32607193-32607292,32607402-32607572,
32607790-32607838,32607912-32608003,32608705-32608774,
32608999-32609023,32609059-32609293,32609425-32609525,
32609614-32609865
Length = 899
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 93 WASRAPPRLKVGQPRKPSYRSIQQPYES 10
WA +PPRL +G P + QP+E+
Sbjct: 689 WAPMSPPRLALGWQSMPG-TPVPQPHEA 715
>02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,
5710542-5710661,5711321-5711421,5711618-5711743,
5713504-5713596,5713694-5713816,5713889-5714032,
5714539-5714672,5714893-5715002,5715315-5715430,
5716438-5716572,5716650-5716820,5717545-5717709,
5718165-5718242,5718313-5718445,5718551-5718741,
5718842-5718914,5719001-5719056,5719142-5719300,
5719383-5719496,5719562-5719654,5720544-5720726,
5720801-5720878,5720966-5721052,5721135-5721216,
5721288-5721400,5721486-5721636,5721759-5721877,
5721966-5722163,5722377-5722442,5723837-5723957,
5724224-5724343,5724412-5724542,5725210-5725341,
5725418-5725519,5726231-5726437,5726510-5726626,
5727468-5727623,5727721-5727810,5728624-5728848,
5728969-5729091,5729202-5729284,5729459-5729618,
5730264-5730374,5730652-5730751,5731375-5731454,
5731752-5731847,5731961-5732110
Length = 1991
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 156 VDDDVYMCLKEKVLKYAETLRSKREITLID 245
VDD + +C+K+ + + +R +R I +I+
Sbjct: 1877 VDDIIKLCMKQDCISPNDNIRKRRFIAMIE 1906
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,738,038
Number of Sequences: 37544
Number of extensions: 221298
Number of successful extensions: 811
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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