Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K16
(353 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 1.4
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 23 1.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 3.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 3.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 3.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.7
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 20 7.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 9.9
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.6 bits (46), Expect = 1.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 207 ETLRSKREITLIDGVTLESKGSPRSARAWEP 299
+ +R+ R+ + +DGVTL + S W P
Sbjct: 145 QLIRNLRQSSALDGVTLLADNSVSIKDPWFP 175
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 22.6 bits (46), Expect = 1.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 289 LGSRCPMSRKRERHRWSQD 345
L CP+ + +ER W D
Sbjct: 99 LNEMCPLEKLKERRIWRDD 117
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 3.3
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 171 YMCLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
Y L+ V +E L K ITL + ++ K + AW
Sbjct: 66 YNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 106
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 3.3
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 171 YMCLKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
Y L+ V +E L K ITL + ++ K + AW
Sbjct: 66 YNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 106
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 3.3
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAWEPLSD 308
L E + E + +K+EI + ++ K WEP+S+
Sbjct: 238 LSETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISN 280
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 136 WALLRTVSTMTCI 174
WAL + +S M CI
Sbjct: 328 WALFKAMSHMLCI 340
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 136 WALLRTVSTMTCI 174
WAL + +S M CI
Sbjct: 296 WALFKAMSHMLCI 308
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 298 RCPMSRKRERHR 333
RC +S KR+R R
Sbjct: 79 RCQLSNKRDRSR 90
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
L+ V +E L K ITL + ++ K + AW
Sbjct: 1 LERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 38
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
L+ V +E L K ITL + ++ K + AW
Sbjct: 1 LERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 38
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
L+ V +E L K ITL + ++ K + AW
Sbjct: 1 LERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 38
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
L+ V +E L K ITL + ++ K + AW
Sbjct: 1 LERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 38
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
L+ V +E L K ITL + ++ K + AW
Sbjct: 1 LERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 38
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 180 LKEKVLKYAETLRSKREITLIDGVTLESKGSPRSARAW 293
L+ V +E L K ITL + ++ K + AW
Sbjct: 1 LERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAW 38
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 9.9
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3
Query: 141 IVKDCVDD 164
I+KDCV+D
Sbjct: 1306 IIKDCVED 1313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,158
Number of Sequences: 438
Number of extensions: 2106
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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