Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K15
(431 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 192 8e-50
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 189 7e-49
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 175 1e-44
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 90 6e-19
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 87 8e-18
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 83 7e-17
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 83 1e-16
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 81 4e-16
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 79 1e-15
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 79 2e-15
03_01_0034 + 318432-318825,318902-319851 79 2e-15
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 78 3e-15
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 77 8e-15
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.40
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.92
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.6
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 29 2.1
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 2.1
12_02_0823 + 23461423-23462124 28 2.8
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 3.7
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 4.9
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 27 6.5
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 27 6.5
12_02_0070 - 13164738-13164809,13165187-13165501 27 8.6
09_04_0369 - 17009308-17009501,17009528-17009714,17009802-170101... 27 8.6
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 8.6
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 27 8.6
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 192 bits (469), Expect = 8e-50
Identities = 80/90 (88%), Positives = 88/90 (97%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
HVPRAVFVDLEPTV+DEVRTG YRQL+HPE
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPE 90
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 189 bits (461), Expect = 7e-49
Identities = 78/90 (86%), Positives = 88/90 (97%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
HVPRAVFVDLEPTV+DEVRTG YRQL+HPE
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPE 90
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 175 bits (426), Expect = 1e-44
Identities = 72/90 (80%), Positives = 84/90 (93%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
HVPRA+FVDLEPTV+DEVRTG+YRQL+HPE
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPE 90
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 90.2 bits (214), Expect = 6e-19
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +1
Query: 271 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQL+HPE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPE 150
Score = 81.4 bits (192), Expect = 3e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 276
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 86.6 bits (205), Expect = 8e-18
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = +1
Query: 142 QKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 321
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 322 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
E G+ VPRAV +DLEP +D VRTG Y Q++ P+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPD 268
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 83.4 bits (197), Expect = 7e-17
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 330
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 331 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
G+ VPRAV +DLEP +D VRTG Y Q++ P+
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPD 88
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 82.6 bits (195), Expect = 1e-16
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
VPRAV +DLEP +D VRTG Y Q++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPD 88
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 81.0 bits (191), Expect = 4e-16
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
+VPRAV +DLEP +D VR+G Y Q++ P+
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPD 88
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 79.4 bits (187), Expect = 1e-15
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
+VPRAV +DLEP +D VR+G + Q++ P+
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPD 88
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/89 (43%), Positives = 53/89 (59%)
Frame = +1
Query: 163 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 342
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 343 VPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
+PRA+ VDLEP V++ ++ YR LY+ E
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHE 89
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
VPRAV +DLEP +D VR+G Y ++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPD 88
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 78.2 bits (184), Expect = 3e-15
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
VPRAV +DLEP +D VR+G + Q++ P+
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPD 88
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 76.6 bits (180), Expect = 8e-15
Identities = 36/90 (40%), Positives = 51/90 (56%)
Frame = +1
Query: 160 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 339
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 340 HVPRAVFVDLEPTVVDEVRTGTYRQLYHPE 429
HVPRAV +DLEP +D +R+G ++ P+
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPD 88
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 299 SSPPPMVLSVGI*PSGWMPCSRQYSSQ 219
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.9 bits (64), Expect = 0.92
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 296 SPPPMVLSVGI*PSGWMPCSRQYSSQ 219
+P P+ LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 293 PPPMVLSVGI*PSGWMPCSR 234
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 203 RSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 379
+S MP + + TA+ L R LT S V + P + + P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 287 PMVLSVGI*PSGWMPCSRQYSSQ 219
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 194 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVPS 358
P S+ + AG + TA RC LTR +G + P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 206 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 367
SE+P S + S A ++ PS E T + ++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTVT---ASRPSSAPVFPAPRSTV 918
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 256 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 351
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 212 MPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTR 391
MP S + +L + C+L P G+ PS R R + S V + L LT
Sbjct: 808 MPVDSFVGFKYLQDLKIHCKLLCPQGMVLPPSLR---RLSIVSGRKVDFPACLQS--LTS 862
Query: 392 SALAHTDSC 418
+ H SC
Sbjct: 863 LNILHLSSC 871
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.1 bits (57), Expect = 6.5
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +1
Query: 169 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 348
CI + V IG C C G DK GDD +ET HVP
Sbjct: 2740 CIEISVDGKFALIGT-CLSNSCNRDGFSAIDDYELDKP--NGDDDLPEL-NETKPSVHVP 2795
Query: 349 RAVFVDL 369
F+DL
Sbjct: 2796 SVCFIDL 2802
>12_02_0070 - 13164738-13164809,13165187-13165501
Length = 128
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -3
Query: 396 ADLVNYSGFKIDEDGTGNVLASSGL-----AEERVEGVVSTPD 283
A L+++ G+ + GTGN ASS E VEG V+ D
Sbjct: 23 ASLLDWLGYNCERGGTGNDAASSASRWENNGEVEVEGAVALED 65
>09_04_0369 -
17009308-17009501,17009528-17009714,17009802-17010167,
17010341-17010450,17012422-17012656
Length = 363
Score = 26.6 bits (56), Expect = 8.6
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = -3
Query: 240 LKAIQLPAGISDLDSGLANVYRDALTHFVLSFLNLSVDKIN*SVVVQRDQLRGLPNERIR 61
++ ++ P GI+ + +V+ D L +FV LN S+ +I ++ +DQL+ N R
Sbjct: 180 VELLRFPGGITVIPEQSGSVWADPLFNFV---LNNSIYQILGNITELKDQLKLGLNLRSY 236
Query: 60 LKIR*MSLYRTGVDVD*PS 4
K+ G VD P+
Sbjct: 237 EKVYLQFRNEIGSSVDAPA 255
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 8.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 211 NACWELYCLEHGI 249
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 303 GVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVYRDALTH 160
G + P+ + ++ I L + A+ +PAG + GLA RD + H
Sbjct: 215 GRAALPNATPNLNIGIDLWSTPPALAVPAGQGEASPGLALARRDGVAH 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,914,913
Number of Sequences: 37544
Number of extensions: 289530
Number of successful extensions: 1006
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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