Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K14
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 112 1e-25
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 108 2e-24
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 108 2e-24
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 108 2e-24
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 107 4e-24
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 41 3e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 40 7e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 40 7e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 38 0.002
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 38 0.002
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.002
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 38 0.002
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.002
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 38 0.004
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 37 0.005
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 37 0.007
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 37 0.007
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 37 0.007
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 37 0.007
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 37 0.007
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 37 0.007
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 37 0.007
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.049
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.049
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.049
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.049
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 33 0.086
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 33 0.11
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 32 0.15
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 32 0.15
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 32 0.15
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 32 0.15
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.20
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.20
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 32 0.20
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.20
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.20
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.20
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 31 0.26
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 0.26
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 0.26
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 0.35
U53333-3|AAA96156.1| 108|Caenorhabditis elegans Hypothetical pr... 30 0.60
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 0.60
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 30 0.60
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 30 0.60
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 30 0.80
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 30 0.80
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 30 0.80
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 30 0.80
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 30 0.80
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 29 1.1
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 29 1.1
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 29 1.1
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 29 1.4
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical p... 29 1.8
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 29 1.8
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 29 1.8
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 28 2.4
U64835-4|AAG24197.2| 343|Caenorhabditis elegans Serpentine rece... 28 2.4
AF125964-5|AAP13765.1| 722|Caenorhabditis elegans Hypothetical ... 28 2.4
AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical ... 28 2.4
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 3.2
AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical... 28 3.2
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 28 3.2
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 3.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81557-6|CAB04529.1| 357|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 4.3
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 4.3
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 4.3
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 4.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 27 5.6
U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical pr... 27 5.6
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 27 5.6
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 27 5.6
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 27 5.6
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 27 5.6
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 27 5.6
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 5.6
AF125448-8|AAD12813.2| 334|Caenorhabditis elegans Hypothetical ... 27 5.6
AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical ... 27 7.4
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 27 7.4
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 26 9.8
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 26 9.8
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 26 9.8
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 26 9.8
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 26 9.8
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 26 9.8
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 26 9.8
U21323-13|AAA62547.2| 284|Caenorhabditis elegans Hypothetical p... 26 9.8
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 26 9.8
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 26 9.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 26 9.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 26 9.8
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 26 9.8
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 26 9.8
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 26 9.8
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 26 9.8
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 26 9.8
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 26 9.8
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 26 9.8
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 26 9.8
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 112 bits (269), Expect = 1e-25
Identities = 57/93 (61%), Positives = 70/93 (75%), Gaps = 8/93 (8%)
Frame = +3
Query: 6 RVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQY 182
+VM+ E+GRSKGFGFVCF PEEAT AVT+MN +++G KPLYVAL QRKEDR+A L SQY
Sbjct: 373 KVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQY 432
Query: 183 MQRMASITMQQ-------MGQIFQPSSAGGYFV 260
MQR+A++ M Q M Q++QP GYFV
Sbjct: 433 MQRLATLRMGQQASGVPAMTQLYQPGQQ-GYFV 464
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHL 170
++G SKG+GFV F + A A+ ++NG ++ K +YV Q + R L
Sbjct: 180 DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALTQRKEDRKAHLTSQY 182
G+ KGFGFV F+ + A +AV ++N I+ GT L V Q+K +R A L +Y
Sbjct: 275 GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKY 329
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 112 bits (269), Expect = 1e-25
Identities = 57/93 (61%), Positives = 70/93 (75%), Gaps = 8/93 (8%)
Frame = +3
Query: 6 RVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQY 182
+VM+ E+GRSKGFGFVCF PEEAT AVT+MN +++G KPLYVAL QRKEDR+A L SQY
Sbjct: 373 KVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQY 432
Query: 183 MQRMASITMQQ-------MGQIFQPSSAGGYFV 260
MQR+A++ M Q M Q++QP GYFV
Sbjct: 433 MQRLATLRMGQQASGVPAMTQLYQPGQQ-GYFV 464
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHL 170
++G SKG+GFV F + A A+ ++NG ++ K +YV Q + R L
Sbjct: 180 DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKEL 230
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALTQRKEDRKAHLTSQY 182
G+ KGFGFV F+ + A +AV ++N I+ GT L V Q+K +R A L +Y
Sbjct: 275 GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKY 329
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 108 bits (259), Expect = 2e-24
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+ QRKEDR+A L SQYMQR+A
Sbjct: 292 ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRLA 351
Query: 198 SITMQ---QMGQIFQPSSAG-GYFVSHHNXLAQRYLWVQRQMR 314
S+ M ++ P+ G GY+V++ + + Q+ +R
Sbjct: 352 SMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQMVR 394
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALTQRKEDRKAHLTSQY 182
VM +G+SKGFGFV F++PEEA AV + + I GT L+V Q+K +R A L ++
Sbjct: 184 VMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKH 243
Query: 183 MQRMASITMQQMG 221
Q A + G
Sbjct: 244 EQHKAERMQKYQG 256
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 108 bits (259), Expect = 2e-24
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+ QRKEDR+A L SQYMQR+A
Sbjct: 289 ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRLA 348
Query: 198 SITMQ---QMGQIFQPSSAG-GYFVSHHNXLAQRYLWVQRQMR 314
S+ M ++ P+ G GY+V++ + + Q+ +R
Sbjct: 349 SMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQMVR 391
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALTQRKEDRKAHLTSQY 182
VM +G+SKGFGFV F++PEEA AV + + I GT L+V Q+K +R A L ++
Sbjct: 181 VMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKH 240
Query: 183 MQRMASITMQQMG 221
Q A + G
Sbjct: 241 EQHKAERMQKYQG 253
Score = 46.4 bits (105), Expect = 9e-06
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
EDG SKG+GFV F + E A A+ ++NG ++ K ++V Q + R L + ++
Sbjct: 92 EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL-GETAKQFT 150
Query: 198 SITMQQMGQIFQPSSAGGYFVSHHNXLAQRYLWVQRQMRA---NTTYTPMDCPTTCKTKH 368
++ ++ G + + F N + + V+ + + P + T + H
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 210
Query: 369 SNTCIG 386
+T G
Sbjct: 211 DSTIEG 216
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 108 bits (259), Expect = 2e-24
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+ QRKEDR+A L SQYMQR+A
Sbjct: 352 ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQYMQRLA 411
Query: 198 SITMQ---QMGQIFQPSSAG-GYFVSHHNXLAQRYLWVQRQMR 314
S+ M ++ P+ G GY+V++ + + Q+ +R
Sbjct: 412 SMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQMVR 454
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALTQRKEDRKAHLTSQY 182
VM +G+SKGFGFV F++PEEA AV + + I GT L+V Q+K +R A L ++
Sbjct: 244 VMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKH 303
Query: 183 MQRMASITMQQMG 221
Q A + G
Sbjct: 304 EQHKAERMQKYQG 316
Score = 46.4 bits (105), Expect = 9e-06
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
EDG SKG+GFV F + E A A+ ++NG ++ K ++V Q + R L + ++
Sbjct: 155 EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL-GETAKQFT 213
Query: 198 SITMQQMGQIFQPSSAGGYFVSHHNXLAQRYLWVQRQMRA---NTTYTPMDCPTTCKTKH 368
++ ++ G + + F N + + V+ + + P + T + H
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Query: 369 SNTCIG 386
+T G
Sbjct: 274 DSTIEG 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 107 bits (256), Expect = 4e-24
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 4/103 (3%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
E+GRSKGFGFVCF PEEAT AVTEMN ++V +KPLYVA+ QRKEDR+A L SQYMQR+A
Sbjct: 352 ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKEDRRAQLASQYMQRVA 411
Query: 198 SITMQ---QMGQIFQPSSAG-GYFVSHHNXLAQRYLWVQRQMR 314
S+ M ++ P+ G GY+V++ + + Q+ +R
Sbjct: 412 SMRMHGNVPGAAMYNPTQPGPGYYVANPMQQQRNFAGGQQMVR 454
Score = 52.8 bits (121), Expect = 1e-07
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEM-NGRIVGTK-PLYVALTQRKEDRKAHLTSQY 182
VM +G+SKGFGFV F++PEEA AV + + I GT L+V Q+K +R A L ++
Sbjct: 244 VMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKH 303
Query: 183 MQRMASITMQQMG 221
Q A + G
Sbjct: 304 EQHKAERMQKYQG 316
Score = 46.4 bits (105), Expect = 9e-06
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMA 197
EDG SKG+GFV F + E A A+ ++NG ++ K ++V Q + R L + ++
Sbjct: 155 EDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNREL-GETAKQFT 213
Query: 198 SITMQQMGQIFQPSSAGGYFVSHHNXLAQRYLWVQRQMRA---NTTYTPMDCPTTCKTKH 368
++ ++ G + + F N + + V+ + + P + T + H
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Query: 369 SNTCIG 386
+T G
Sbjct: 274 DSTIEG 279
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKE 152
+SKG+GFV F E+ +A+ EM+G+ VG +P+ + + KE
Sbjct: 242 KSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWKE 283
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL-TQRKEDRKA 164
++ + SKGFGFV +P++A +A E NG + + + V L TQR ++KA
Sbjct: 13 IIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 65
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL-TQRKEDRKA 164
++ + SKGFGFV +P++A +A E NG + + + V L TQR ++KA
Sbjct: 131 IIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 183
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL-TQRKEDRKA 164
++ + SKGFGFV +P++A +A E NG + + + V L TQR ++KA
Sbjct: 131 IIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKA 183
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 38.3 bits (85), Expect = 0.002
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRK--EDRKAHLTSQ--YMQRM 194
+SKG+GFV F + + A A+ MNG+ +G + + RK E+ + LT + +
Sbjct: 174 KSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTK 233
Query: 195 ASITMQQMGQIFQPSSAGGY--FVSHHNXLAQRYLWVQRQMRANTTYTPMDCPT 350
A T +G I Q ++ S + +A+ ++ + Q A Y +C T
Sbjct: 234 ADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF-KTQRYAFVRYEKKECAT 286
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGR 104
+++ + FV + E ATKA+ EMNG+
Sbjct: 270 KTQRYAFVRYEKKECATKAIMEMNGK 295
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRK 149
+SKG+GFV + EEA +A+ +MNG+ +G + + RK
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVG 113
+ +G+ FV F + + A KA+ +MN + VG
Sbjct: 160 KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 188
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRK 149
+SKG+GFV + EEA +A+ +MNG+ +G + + RK
Sbjct: 71 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVG 113
+ +G+ FV F + + A KA+ +MN + VG
Sbjct: 170 KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 198
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRK 149
+SKG+GFV + EEA +A+ +MNG+ +G + + RK
Sbjct: 174 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVG 113
+ +G+ FV F + + A KA+ +MN + VG
Sbjct: 273 KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 301
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRK 149
+SKG+GFV + EEA +A+ +MNG+ +G + + RK
Sbjct: 142 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVG 113
+ +G+ FV F + + A KA+ +MN + VG
Sbjct: 241 KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 269
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKED 155
+ KG+GFV + E+A +A+ EMNG +G + + RK D
Sbjct: 171 KGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMASI 203
G+S G+GFV + E+A +AV+ NG + K + V+ + D+ S+
Sbjct: 80 GQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSM 139
Query: 204 TMQQMGQIFQP 236
T+ ++ IF+P
Sbjct: 140 TLHELESIFRP 150
Score = 32.3 bits (70), Expect = 0.15
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 15/142 (10%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVG--TKPLYV--ALTQRKEDRKAHLTSQYMQR 191
G SKG GFV F +EA A+ +NG I ++ + V A + K L+ +
Sbjct: 166 GLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFANNPASNNPKGLLSDLEAVQ 225
Query: 192 MASITMQQMGQIFQP----SSAGGYFVSHHNXLAQRY----LWVQRQMRANTTYTPMDCP 347
A+ T+ + I ++AGG HH + +Y + + T P D
Sbjct: 226 QAATTLVPLSTILGAPTLRATAGGIGPMHHAPITSKYRYSPMGAITAVSQPTATLPADYL 285
Query: 348 TT---CKTKHSNTCIGLRKYAT 404
TT + N GL +AT
Sbjct: 286 TTSALLQMSQLNALAGLNPFAT 307
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 33 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 131
KG+ FV S+ EA A+ +NG + K L V
Sbjct: 414 KGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 30 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 137
SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 375 SKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 410
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 30 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 137
SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 539 SKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 30 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 137
SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 539 SKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV-ALTQRKEDRKAHLTSQYM 185
++ + SKGFGFV P++A +A E++G ++ + + V T R +K T +
Sbjct: 184 IIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKKVKPTGGIL 243
Query: 186 QRMASITMQ 212
+M + Q
Sbjct: 244 DQMNPLMAQ 252
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV-ALTQRKEDRKAHLTSQYM 185
++ + SKGFGFV P++A +A E++G ++ + + V T R +K T +
Sbjct: 184 IIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKKVKPTGGIL 243
Query: 186 QRMASITMQ 212
+M + Q
Sbjct: 244 DQMNPLMAQ 252
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 30 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 137
SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 468 SKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 503
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 30 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 137
SK FGFV + + + AT A++ MNG +G+K L V L
Sbjct: 539 SKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQL 574
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQR 146
E GR +GF F+ F+ A +AV +MNG +PL V L +
Sbjct: 41 ETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVNLANK 83
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.049
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQ-RKEDR 158
+SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 468 QSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.049
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 15 LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDR 158
++ G SKGF F+ F+S E + A+ MNG+ + + + V+ +++ +
Sbjct: 136 VDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSK 183
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTP-----TPASAYANMQPPYRPPP 423
P P T PP P TP P + M PP PPP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.049
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 15 LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDR 158
++ G SKGF F+ F+S E + A+ MNG+ + + + V+ +++ +
Sbjct: 146 VDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSK 193
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTP-----TPASAYANMQPPYRPPP 423
P P T PP P TP P + M PP PPP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.049
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQ-RKEDR 158
+SK FGFV + + + A+T MNG +G K L V L + R E R
Sbjct: 468 QSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 33.1 bits (72), Expect = 0.086
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKED 155
E GR +GF FV F+ A +AV + NG + L V L Q + +
Sbjct: 40 ETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVNLAQNRNN 85
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 32.7 bits (71), Expect = 0.11
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 33 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRK----AHLTSQYMQRMAS 200
KG+GFV F SP+ A AV +N G + L Q+++D A+L + ++M
Sbjct: 148 KGYGFVDFESPQAAAAAVDGLNTE--GVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLE 205
Query: 201 ITMQQMGQI 227
+ + G +
Sbjct: 206 TELNKFGMV 214
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.11
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 33 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRK----AHLTSQYMQRMAS 200
KG+GFV F SP+ A AV +N G + L Q+++D A+L + ++M
Sbjct: 122 KGYGFVDFESPQAAAAAVDGLNTE--GVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLE 179
Query: 201 ITMQQMGQI 227
+ + G +
Sbjct: 180 TELNKFGMV 188
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 331 PRWTAQPPVRPSTPTPASAY--ANMQPPYRPPP 423
P+ A P V+P TPAS+Y QPPY PP
Sbjct: 2096 PQQQALPQVQPQFQTPASSYGGGQAQPPYYWPP 2128
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 262 PTITXWHNAIYGSSDKCAQIRPT-PRWTAQPPVRPSTPTPASAYANMQPPYRP 417
PT H+ S IRP+ P+ TA PP P P PA A A+ PP P
Sbjct: 142 PTSHHHHHRSNSISHSSDVIRPSQPKATAPPP--PLVPAPARATASTPPPAPP 192
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 262 PTITXWHNAIYGSSDKCAQIRPT-PRWTAQPPVRPSTPTPASAYANMQPPYRP 417
PT H+ S IRP+ P+ TA PP P P PA A A+ PP P
Sbjct: 502 PTSHHHHHRSNSISHSSDVIRPSQPKATAPPP--PLVPAPARATASTPPPAPP 552
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 331 PRWTAQPPVRPSTPTPASAY--ANMQPPYRPPP 423
P+ A P V+P TPAS+Y QPPY PP
Sbjct: 721 PQQQALPQVQPQFQTPASSYGGGQAQPPYYWPP 753
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKE 152
+ G KGF +V F + ++ A++ +NG G + L V Q+++
Sbjct: 48 DSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMASI 203
G SKG+ F + P +A+ +NG +G K L V L + R +A I
Sbjct: 328 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGI 387
Query: 204 TMQQ 215
+ Q
Sbjct: 388 DLSQ 391
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMN 98
E G+ +GFGFV F E+A A+ MN
Sbjct: 47 ESGKHRGFGFVEFDMAEDAAMAIDNMN 73
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMASI 203
G SKG+ F + P +A+ +NG +G K L V L + R +A I
Sbjct: 328 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGI 387
Query: 204 TMQQ 215
+ Q
Sbjct: 388 DLSQ 391
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMASI 203
G SKG+ F + P +A+ +NG +G K L V L + R +A I
Sbjct: 303 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGI 362
Query: 204 TMQQ 215
+ Q
Sbjct: 363 DLSQ 366
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAHLTSQYMQRMASI 203
G SKG+ F + P +A+ +NG +G K L V L + R +A I
Sbjct: 306 GNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGI 365
Query: 204 TMQQ 215
+ Q
Sbjct: 366 DLSQ 369
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 31.5 bits (68), Expect = 0.26
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNG 101
E GR +GF FV FS A +AV ++NG
Sbjct: 42 ETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 31.5 bits (68), Expect = 0.26
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQ 143
+SKGFGFV F +A A+ +G++V + L V L +
Sbjct: 58 QSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 31.5 bits (68), Expect = 0.26
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQ 143
+SKGFGFV F +A A+ +G++V + L V L +
Sbjct: 58 QSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMN 98
G KGF FV F S ++A +A+ E+N
Sbjct: 214 GLPKGFAFVTFESRDDAARAIAELN 238
>U53333-3|AAA96156.1| 108|Caenorhabditis elegans Hypothetical
protein F36A4.11 protein.
Length = 108
Score = 30.3 bits (65), Expect = 0.60
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 262 PTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPSTP 372
P T W N ++ +I P P +++ P P+TP
Sbjct: 59 PGATSWQNLVHNDLQNHKEIEPRPLASSEAPGEPATP 95
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 0.60
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
P P W P+RP P P PP+ PPP
Sbjct: 25 PPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPP 57
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 30.3 bits (65), Expect = 0.60
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAH---LTSQYMQR 191
+GRS+GF FV F++ E A+ I G K + V + +E++K L S Y ++
Sbjct: 66 NGRSRGFAFVEFTTGEGCKLALAAREQTIKG-KSVEVKPAKSRENKKVFVGGLPSDYSEQ 124
Query: 192 MASITMQQMGQI 227
+Q G++
Sbjct: 125 DLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 30.3 bits (65), Expect = 0.60
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDRKAH---LTSQYMQR 191
+GRS+GF FV F++ E A+ I G K + V + +E++K L S Y ++
Sbjct: 66 NGRSRGFAFVEFTTGEGCKLALAAREQTIKG-KSVEVKPAKSRENKKVFVGGLPSDYSEQ 124
Query: 192 MASITMQQMGQI 227
+Q G++
Sbjct: 125 DLRSHFEQFGKV 136
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 29.9 bits (64), Expect = 0.80
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNG 101
+ G+SKGF F+C+ AV NG
Sbjct: 74 DTGKSKGFAFLCYKDQRSTILAVDNFNG 101
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 29.9 bits (64), Expect = 0.80
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
P PR A PP P P +++ A PP +PPP
Sbjct: 22 PKPREGAPPPAPPLAPGASTSQA--PPPLQPPP 52
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 131
G K F FV + PE A A MNG+++G + L V
Sbjct: 140 GHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 131
G K F FV + PE A A MNG+++G + L V
Sbjct: 140 GHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 131
G K F FV + PE A A MNG+++G + L V
Sbjct: 140 GHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKV 175
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 352 PVRPSTPTPASAYANMQPPYRPPP 423
P+R S+P P++ +PP PPP
Sbjct: 1487 PIRTSSPVPSTQTTPSRPPQMPPP 1510
>Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical
protein T07G12.3 protein.
Length = 638
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 317 KYDLHPDGLPNHL*DQALQHLHR 385
K+++H + L NHL ++ L H+HR
Sbjct: 511 KFEIHNETLKNHLGEKLLNHVHR 533
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 352 PVRPSTPTPASAYANMQPPYRPPP 423
P+R S+P P++ +PP PPP
Sbjct: 1487 PIRTSSPVPSTQTTPSRPPQMPPP 1510
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRKEDR 158
DG SKG GFV F + + A+ EM+ VG + + L + +R
Sbjct: 192 DGSSKGSGFVRFGNQTDQQMALVEMHRTKVGGCRIILKLAGSRGER 237
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 6 RVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALT 140
RV +DG+ KG FV F + A K V + ++ + L VAL+
Sbjct: 714 RVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALS 758
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 414 TVGWLHICVSRCRCWSAWSY 355
TVGW+ C + + W WSY
Sbjct: 324 TVGWIFFCSALFKLWEDWSY 343
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 414 TVGWLHICVSRCRCWSAWSY 355
TVGW+ C + + W WSY
Sbjct: 324 TVGWIFFCSALFKLWEDWSY 343
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 173 SQMGFA-VFLALS*SNIKRFCSNNTSIHFS 87
SQ+GF V+ N++ F +NNTSIH S
Sbjct: 151 SQLGFCCVYFVFMADNLEDFFNNNTSIHLS 180
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 137
++G+SKG + ++ P EA +AV+ +NG+ + + L V +
Sbjct: 223 KEGKSKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNLVVKM 262
>Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical protein
K07G5.1 protein.
Length = 998
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 343 AQPPVRPSTPTPASAYANMQPPYRPPP 423
A PP+ P P P S M P PPP
Sbjct: 949 APPPLLPPKPEPRSRLIGMTSPTTPPP 975
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 36 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 134
G+GFV F + A K + EM+G+ + K + V+
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVS 163
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 36 GFGFVCFSSPEEATKAVTEMNGRIVG 113
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 36 GFGFVCFSSPEEATKAVTEMNGRIVG 113
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 36 GFGFVCFSSPEEATKAVTEMNGRIVG 113
GFGFV F +A AV ++NG+ +G
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELG 62
>Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical
protein C16C10.11 protein.
Length = 154
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 298 SSDKCAQIRPTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
S A +R PR AQ P PA+A PP P P
Sbjct: 8 SPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTP 49
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVT----EMNGRIVGTKPLYVALTQRK 149
R++GFGF+ F P K + E++G+ + K + TQ K
Sbjct: 84 RARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAK 128
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVT----EMNGRIVGTK 119
R +GFGFV F S E A K E+NG++V K
Sbjct: 173 RHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECK 207
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVT----EMNGRIVGTKPLYVALTQRK 149
R++GFGF+ F P K + E++G+ + K + TQ K
Sbjct: 84 RARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAK 128
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVT----EMNGRIVGTK 119
R +GFGFV F S E A K E+NG++V K
Sbjct: 173 RHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECK 207
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNG 101
E G+ KG+GF+ F + A A+ +NG
Sbjct: 54 ETGKPKGYGFIEFPDIQTAEVAIRNLNG 81
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 343 AQPPVRPSTPTPASAYANMQPPYR 414
A PP+RPSTP P ++ + PY+
Sbjct: 291 AIPPLRPSTPPPTASTTSHFHPYK 314
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 319 IRPTPRWTAQPPVRPSTPT-PASAYANMQPP 408
++ PR T +PP RP+T T P + A PP
Sbjct: 1113 LKSPPRNTKKPPSRPTTATRPTAVAARTAPP 1143
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 319 IRPTPRWTAQPPVRPSTPT-PASAYANMQPP 408
++ PR T +PP RP+T T P + A PP
Sbjct: 1113 LKSPPRNTKKPPSRPTTATRPTAVAARTAPP 1143
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 295 GSSDKCAQIRPTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
G D CA R QP +P PA QP Y+P P
Sbjct: 33 GGCDPCAAARAPYYPPQQPAYQPQYQQPAYQPHYQQPAYQPQP 75
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 36 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALTQRK 149
GFGFV F +A AV ++NG+ + + + + +RK
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRK 73
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEATKAV 86
DG SKGFGFV SS E K +
Sbjct: 209 DGNSKGFGFVRMSSVGEQNKVL 230
>U64835-4|AAG24197.2| 343|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 25 protein.
Length = 343
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 181 TCNAWQVLLCNKWVRYSNQVVQEDTLCPTITXWHNAI 291
TC A+ + W +++N V+ +CP + W AI
Sbjct: 134 TCVAYPIWHKVFWKKHTNNVIIVSLICPALFTWQLAI 170
>AF125964-5|AAP13765.1| 722|Caenorhabditis elegans Hypothetical
protein W03G1.6b protein.
Length = 722
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Frame = -1
Query: 359 LTGGWAVHRGVG-------RICAHLSLDP*IAL--CQXVMVGHKVSSCTTWLEYLTHLLH 207
L G +AVH +G R+ HL + +A+ +GH + T ++ L +L H
Sbjct: 7 LQGFYAVHDELGSGGFGKVRLATHLLTNQKVAIKIIDKKQLGHDLPRVQTEMDALRNLSH 66
Query: 206 SNTCHALHVL*SQMGFAVFL 147
N C H + ++ F + +
Sbjct: 67 QNICRLYHYIETEDKFFIVM 86
>AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical
protein W03G1.6a protein.
Length = 726
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Frame = -1
Query: 359 LTGGWAVHRGVG-------RICAHLSLDP*IAL--CQXVMVGHKVSSCTTWLEYLTHLLH 207
L G +AVH +G R+ HL + +A+ +GH + T ++ L +L H
Sbjct: 7 LQGFYAVHDELGSGGFGKVRLATHLLTNQKVAIKIIDKKQLGHDLPRVQTEMDALRNLSH 66
Query: 206 SNTCHALHVL*SQMGFAVFL 147
N C H + ++ F + +
Sbjct: 67 QNICRLYHYIETEDKFFIVM 86
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 27.9 bits (59), Expect = 3.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEA 74
DG+SKG+GF+ F + ++A
Sbjct: 102 DGQSKGYGFITFETEDQA 119
>AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32b protein.
Length = 216
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 349 PPVRPSTPTPASAYAN--MQPPYRPP 420
PP STP P Y+ M PPY PP
Sbjct: 189 PPPLMSTPMPPPGYSMCYMMPPYYPP 214
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 349 PPVRPSTPTPASAYAN--MQPPYRPP 420
PP STP P Y+ M PPY PP
Sbjct: 357 PPPLMSTPMPPPGYSMCYMMPPYYPP 382
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 3.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEA 74
DG+SKG+GF+ F + ++A
Sbjct: 103 DGQSKGYGFITFETEDQA 120
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 24 GRSKGFGFVCFSSPEEATKA 83
G S+GFGF+ F+ E+AT A
Sbjct: 114 GNSRGFGFIYFNLIEDATAA 133
>Z81557-6|CAB04529.1| 357|Caenorhabditis elegans Hypothetical
protein F59A1.12 protein.
Length = 357
Score = 27.5 bits (58), Expect = 4.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 254 VSSCTTWLEYLTHLLHSNTCHALHV 180
++ C W++YL ++ TC LH+
Sbjct: 23 LADCGEWIQYLNRVVSLTTCIILHI 47
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPTPASAYANMQPP--YRPPP 423
P PR PP P P P Y QPP RP P
Sbjct: 95 PPPRNNCLPP--PGPPPPCQQYQQPQPPPCQRPQP 127
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPTPASAYANMQPP--YRPPP 423
P PR PP P P P Y QPP RP P
Sbjct: 95 PPPRNNCLPP--PGPPPPCQQYQQPQPPPCQRPQP 127
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPTPASAYANMQPP--YRPPP 423
P PR PP P P P Y QPP RP P
Sbjct: 95 PPPRNNCLPP--PGPPPPCQQYQQPQPPPCQRPQP 127
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 247 EDTLCPTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPST 369
+D++C + + ++ +D C RP W PP +T
Sbjct: 168 QDSICACVGSFPTCLFSENDTCISNRPF--WNYDPPTASTT 206
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 358 RPSTPTPASAYANMQPPYRPP 420
+PSTP P +M PP +PP
Sbjct: 1153 KPSTPRPPRFRISMSPPRKPP 1173
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 247 EDTLCPTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPST 369
+D++C + + ++ +D C RP W PP +T
Sbjct: 150 QDSICACVGSFPTCLFSENDTCISNRPF--WNYDPPTASTT 188
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 18 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 110
+ G SKG FV FS+P EA+ + + ++
Sbjct: 299 DSGHSKGTAFVHFSTPIEASNCIEGVEDGVI 329
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPT-PASAYANMQPPYRPPP 423
PTP + + PP PST + P+ A A PP P P
Sbjct: 415 PTP-FDSPPPSMPSTSSGPSGALAPPPPPSHPIP 447
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPT-PASAYANMQPPYRPPP 423
PTP + + PP PST + P+ A A PP P P
Sbjct: 443 PTP-FDSPPPSMPSTSSGPSGALAPPPPPSHPIP 475
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 313 AQIRPTPRWTAQPPVRPSTPTPASAYANMQPPYRP 417
A RP P AQPP P TPTP+ P P
Sbjct: 157 ASARPAPFPAAQPPPAP-TPTPSYQQQMAPRPQAP 190
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical
protein C38D4.4 protein.
Length = 556
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 349 PPVRPSTPTPASAYAN 396
PPVRPST T S++AN
Sbjct: 161 PPVRPSTATGHSSFAN 176
>U61949-7|AAB03155.1| 510|Caenorhabditis elegans Hypothetical
protein F49E8.7a protein.
Length = 510
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 84 PLLWLLQEMKNIRIQNLC-CDHPPT*P 7
PLLW+ ++ + IQN C CD PP P
Sbjct: 175 PLLWMKAGIEKL-IQNNCQCDQPPIVP 200
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 229 SNQVVQE-DTLCPTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPSTP 372
S+QV++ + PT HN + D A RP P PP RP P
Sbjct: 117 SSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 229 SNQVVQE-DTLCPTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPSTP 372
S+QV++ + PT HN + D A RP P PP RP P
Sbjct: 758 SSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 229 SNQVVQE-DTLCPTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPSTP 372
S+QV++ + PT HN + D A RP P PP RP P
Sbjct: 758 SSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPP 806
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 33 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALT 140
+G+G+V + + E+A K++ M+G + ++V +T
Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMT 210
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 229 SNQVVQE-DTLCPTITXWHNAIYGSSDKCAQIRPTPRWTAQPPVRPSTP 372
S+QV++ + PT HN + D A RP P PP RP P
Sbjct: 758 SSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSPPPRPPPP 806
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 PTPRWTAQPPVRPSTPT-PASAYANMQPPYRPPP 423
PTP + + PP PST + P+ A A PP P P
Sbjct: 415 PTP-FDSPPPSMPSTSSGPSGALAPPPPPSHPIP 447
>AF125448-8|AAD12813.2| 334|Caenorhabditis elegans Hypothetical
protein H14E04.1 protein.
Length = 334
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 339 PSGCRSYLRAFVAGPINSVVPGSYGGTQS 253
P+G + + R F+ G +NS+V G G S
Sbjct: 294 PAGFKQFNRTFLCGTVNSIVGGGRMGILS 322
>AC024876-8|AAF60889.1| 187|Caenorhabditis elegans Hypothetical
protein Y94H6A.8 protein.
Length = 187
Score = 26.6 bits (56), Expect = 7.4
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = +1
Query: 211 NKWVRYSNQVVQEDTLCPTITXWHNAIYGSSDKCAQIRPTP 333
N+WV + ++V + WH+ ++ +D ++P P
Sbjct: 105 NRWVEFPDKVWLDYDATQVPPEWHSWLHHITDDAPSVKPPP 145
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 316 QIRPTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
Q + P A PPV P PA + + PY PP
Sbjct: 167 QQQQQPNGQAPPPVYPPFGQPAPQMSGQRMPYPYPP 202
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 328 TPRWTAQPP-VRPSTPTPASAYANMQPPYRPPP 423
TP W +PP P+ P+ A + P + PP
Sbjct: 849 TPSWDHKPPPTMPANMPPSKPVAPVTPGWNDPP 881
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 328 TPRWTAQPP-VRPSTPTPASAYANMQPPYRPPP 423
TP W +PP P+ P+ A + P + PP
Sbjct: 849 TPSWDHKPPPTMPANMPPSKPVAPVTPGWNDPP 881
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 349 PPVRPSTPTPASAYANMQPPYRPPP 423
PP RP P + P RPPP
Sbjct: 690 PPARPEAPKKDETAVDAAAPPRPPP 714
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 313 AQIRPTPRWTAQPPVRPSTP---TPASAYANMQPPYRPPP 423
A + P +Q P P P PA+ + PP PPP
Sbjct: 445 ANLHQAPPMQSQAPNEPENPFITAPAAPQMHNAPPVPPPP 484
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 280 HNAIYGSSDKCAQIRPTPRWTAQPPVRPS 366
HNA + PRWTAQP V P+
Sbjct: 387 HNAKEFFTSAQRYFAEVPRWTAQPGVNPN 415
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 280 HNAIYGSSDKCAQIRPTPRWTAQPPVRPS 366
HNA + PRWTAQP V P+
Sbjct: 387 HNAKEFFTSAQRYFAEVPRWTAQPGVNPN 415
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 280 HNAIYGSSDKCAQIRPTPRWTAQPPVRPS 366
HNA + PRWTAQP V P+
Sbjct: 387 HNAKEFFTSAQRYFAEVPRWTAQPGVNPN 415
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKA 83
++ D SKGFGFV S E KA
Sbjct: 82 IVTNDRGSKGFGFVTLDSIESCEKA 106
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 322 RPTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
+P P+ ++ P +P+ P +A +PP+ P
Sbjct: 1206 KPKPKEVSKEPPKPTEPPKPAAPKKWKPPWEDDP 1239
>U21323-13|AAA62547.2| 284|Caenorhabditis elegans Hypothetical
protein C45G9.2 protein.
Length = 284
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 21 DGRSKGFGFVCFSSPEEATKAVTEMNGRI 107
D RSKGFG S PE V + RI
Sbjct: 87 DVRSKGFGSALLSKPELLADMVRQTRARI 115
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTE 92
RS+GFGFV FS E A+ +
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQ 83
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +1
Query: 325 PTPRWTAQPPVRP-STPTPASAYANMQPPYR 414
P P A P+ P + PTP S N P YR
Sbjct: 138 PPPAAAAAAPISPKAAPTPQSPAPNRVPHYR 168
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 295 GSSDKCAQIRPTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
G + + P P + PP +P+ P P +P RPPP
Sbjct: 67 GRPTESPPLPPPPLPLSNPPAKPTPPPPPP-----KPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 295 GSSDKCAQIRPTPRWTAQPPVRPSTPTPASAYANMQPPYRPPP 423
G + + P P + PP +P+ P P +P RPPP
Sbjct: 289 GRPTESPPLPPPPLPLSNPPAKPTPPPPPP-----KPTIRPPP 326
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73B protein.
Length = 1638
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 280 HNAIYGSSDKCAQIRPTPRWTAQPPVRPS 366
HNA + PRWTAQP V P+
Sbjct: 387 HNAKEFFTSAQRYFAEVPRWTAQPGVNPN 415
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73A protein.
Length = 2488
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 280 HNAIYGSSDKCAQIRPTPRWTAQPPVRPS 366
HNA + PRWTAQP V P+
Sbjct: 387 HNAKEFFTSAQRYFAEVPRWTAQPGVNPN 415
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTE 92
RS+GFGFV FS E A+ +
Sbjct: 24 RSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTE 92
RS+GFGFV FS E A+ +
Sbjct: 24 RSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTE 92
RS+GFGFV FS E A+ +
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQ 83
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 27 RSKGFGFVCFSSPEEATKAVTE 92
RS+GFGFV FS E A+ +
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQ 83
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 343 AQPPVRPSTPTPASAYANMQPPYRPPP 423
++PP +PSTP A A +Q P P
Sbjct: 761 SRPPSQPSTPATAPATPMLQASQAPQP 787
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 VMLEDGRSKGFGFVCFSSPEEATKA 83
++ D SKGFGFV S E KA
Sbjct: 82 IVTNDRGSKGFGFVTLDSIESCEKA 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,834,846
Number of Sequences: 27780
Number of extensions: 278096
Number of successful extensions: 1456
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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