Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K11
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   3.3  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   7.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 61  KVYKNSMKCFFLVKEIK 111
           K+ +NS+ CFF + +++
Sbjct: 556 KITRNSLDCFFTMNDLE 572


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 61  KVYKNSMKCFFLVKEIK 111
           K+ +NS+ CFF + +++
Sbjct: 556 KITRNSLDCFFTMNDLE 572


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 413  KDTNGSQFSITTVKTPWLDGRHV 345
            +D+   Q+     + PWL+G HV
Sbjct: 983  EDSMKQQYGKRRKEPPWLEGVHV 1005


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 4/21 (19%)
 Frame = +2

Query: 11 FFFL----ITNYFISYTVKIR 61
          FFFL    IT+YF++ T+ I+
Sbjct: 9  FFFLSVILITSYFVTPTMSIK 29


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 362 LDGRHVVFGKIIEGMDVVRKIEKTVTG 282
           L G   VFG+ ++GM+V   +++  +G
Sbjct: 878 LQGVQQVFGQGVQGMNVPYGMQRGQSG 904


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,201
Number of Sequences: 438
Number of extensions: 1441
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)