Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K07
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064483-1|AAH64483.1|  525|Homo sapiens chromosome 17 open read...    28   6.0  
AK056090-1|BAB71091.1|  525|Homo sapiens protein ( Homo sapiens ...    28   6.0  

>BC064483-1|AAH64483.1|  525|Homo sapiens chromosome 17 open reading
           frame 56 protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 205 LFKKFKKISHE-PGGDNIYLHFQVDNVHGSS 294
           LF++  KISHE PG     L + +  +H SS
Sbjct: 35  LFEEIAKISHESPGSSQCLLEYLLSRLHSSS 65


>AK056090-1|BAB71091.1|  525|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31528 fis, clone NT2RI2000412. ).
          Length = 525

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 205 LFKKFKKISHE-PGGDNIYLHFQVDNVHGSS 294
           LF++  KISHE PG     L + +  +H SS
Sbjct: 35  LFEEIAKISHESPGSSQCLLEYLLSRLHSSS 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,419,107
Number of Sequences: 237096
Number of extensions: 686431
Number of successful extensions: 1019
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)