Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K06
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   183   2e-48
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    22   8.9  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  183 bits (446), Expect = 2e-48
 Identities = 83/116 (71%), Positives = 101/116 (87%)
 Frame = -1

Query: 383 KK*AQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTSVALTNVE 204
           +K AQLV+IAHDVDPIELV++LPALCRKMGVPYCI+KGK+RLG LV+RKTCT VALT  E
Sbjct: 155 QKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYRKTCTCVALTQFE 214

Query: 203 *GDRAAFSKVVEAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQK 36
             D+   +K+VE IKTNFN+R++++RRHWGGG+LG KS AR+AKLEKAK RE+ QK
Sbjct: 215 NADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKKREMLQK 270


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 185  FSKVVEAIKTNFNERYEELRRHWG 114
            FS+ +     NF+  + EL+R WG
Sbjct: 1856 FSRTIPFFGGNFSPEHTELQRTWG 1879


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 185  FSKVVEAIKTNFNERYEELRRHWG 114
            FS+ +     NF+  + EL+R WG
Sbjct: 1857 FSRTIPFFGGNFSPEHTELQRTWG 1880


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 207 GVRRPCRLLEGSGSYQDQL 151
           GV RP  L  G+G Y+  L
Sbjct: 743 GVERPTNLDLGTGKYESNL 761


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,953
Number of Sequences: 2352
Number of extensions: 8363
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)