Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_K05
(385 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 152 2e-38
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 141 3e-35
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 83 1e-17
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 79 3e-16
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 34 0.009
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.11
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.25
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 27 1.0
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 27 1.3
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 1.8
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 2.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.3
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 5.4
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 24 7.1
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 24 7.1
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 24 7.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 24 7.1
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 24 7.1
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 24 7.1
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 24 9.4
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 24 9.4
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 24 9.4
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 24 9.4
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 152 bits (368), Expect = 2e-38
Identities = 66/93 (70%), Positives = 76/93 (81%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPFDKTIGGGDDSFNTFFSETGAGK 286
MRE IS+HVGQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 385
+VPR+++VDLEP V+D+VRTG YR LFHPEQLI
Sbjct: 61 YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLI 93
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 141 bits (342), Expect = 3e-35
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 4/97 (4%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG----QMPFDKTIGGGDDSFNTFFSET 274
MRE ISVHVGQAGVQIGNACWELYCLEHGI PDG K +D F TFFSET
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSET 60
Query: 275 GAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 385
G GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++
Sbjct: 61 GQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMV 97
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 83.4 bits (197), Expect = 1e-17
Identities = 38/92 (41%), Positives = 58/92 (63%)
Frame = +2
Query: 110 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPFDKTIGGGDDSFNTFFSETGAGKH 289
RE I++ GQ G QIG+ W+ CLEHGI PDG + T G D + FF ++ ++
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQSDDTRY 60
Query: 290 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 385
+PRA+ +DLEP VV+ + + TY L++PE ++
Sbjct: 61 IPRAILIDLEPRVVNNILSDTYGSLYNPENIL 92
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 78.6 bits (185), Expect = 3e-16
Identities = 37/93 (39%), Positives = 52/93 (55%)
Frame = +2
Query: 107 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPFDKTIGGGDDSFNTFFSETGAGK 286
MRE + + GQ G Q+G A W EHG+ G + T + N +F+E GK
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGI--YHGTSEAQHERLNVYFNEAAGGK 58
Query: 287 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 385
+VPRAV VDLEP +D V++G + LF P+ +I
Sbjct: 59 YVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNII 91
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 33.9 bits (74), Expect = 0.009
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Frame = +3
Query: 117 ASLYTLAKPESRSEMPAGSCIALSTASNLMVR-CHLTRPSGVETT---PSTRSSARPEL- 281
A+ Y + E + ++ G I TA N + H+ R G + P+T+S A+ +
Sbjct: 57 AAYYVVRDAEKKGKLSRGGTIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTL 116
Query: 282 ----ASTFPVPSSSILNPL*LTRSALAHTDS 362
A PVP + NPL A H +S
Sbjct: 117 KFLGAEVHPVPVAPFSNPLNYNHQARRHAES 147
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.3 bits (65), Expect = 0.11
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 147 SRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 320
S S + + + ST S+L ++PS T+ ST SSA P S+ + SSS+++
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.1 bits (62), Expect = 0.25
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 147 SRSEMPAGSCIALSTASNLM--VRCHLTRPSGVET-TPSTRSSARPELASTFPVPSSSIL 317
SRS P + ++S A+ +T P+ V + TP T SS L S+ P+ SSSIL
Sbjct: 346 SRSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSV---LNSSTPITSSSIL 402
Query: 318 N 320
N
Sbjct: 403 N 403
Score = 27.5 bits (58), Expect = 0.76
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARP 275
+T S+S+ + P + S + S ++++S L +T + + T TP T SS
Sbjct: 1929 STPITSSSVLNSSTPITSSTV-VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSV-- 1985
Query: 276 ELASTFPVPSSSILN 320
L S+ P+ SSS+LN
Sbjct: 1986 -LNSSTPITSSSVLN 1999
Score = 26.6 bits (56), Expect = 1.3
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARP 275
+T S+S+ + P + S + S +++++ L +T + + T TP T SS
Sbjct: 405 STPITSSSVLNSSTPITSSSI-LNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV-- 461
Query: 276 ELASTFPVPSSSILN-PL*LTRSALAHTDS 362
L S+ P+ SSS+LN +T S + +T +
Sbjct: 462 -LNSSTPITSSSVLNSSTPITSSTVVNTST 490
Score = 26.6 bits (56), Expect = 1.3
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARP 275
+T S+S+ + P + S + S ++++S L +T + V T TP T S+A
Sbjct: 1077 STPITSSSVLNSSTPITSSTV-LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTA-- 1133
Query: 276 ELASTFPVPSSSILN-PL*LTRSALAHTDS 362
L ++ P+ SSS+LN +T S + +T +
Sbjct: 1134 -LNTSTPITSSSVLNSSTPITSSTVVNTST 1162
Score = 26.6 bits (56), Expect = 1.3
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSARPE 278
+T S+S+ + P + S + + ++++S L +T + V T+ S SS+
Sbjct: 2373 STSITSSSVLNSSTPITSSTV-VNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSS--V 2429
Query: 279 LASTFPVPSSSILN 320
L S+ P+ SSS+LN
Sbjct: 2430 LNSSTPITSSSVLN 2443
Score = 26.2 bits (55), Expect = 1.8
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSARPE 278
+T S+S+ + P + S + S +++++ L +T S + ++ + SS+
Sbjct: 3177 STAITSSSIVNSSTPITSSSV-LNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSS--V 3233
Query: 279 LASTFPVPSSSILN-PL*LTRSALAHTDS 362
L S+ P+ SSS+LN +T S + +T +
Sbjct: 3234 LNSSTPITSSSVLNSSTPITSSTVVNTST 3262
Score = 25.8 bits (54), Expect = 2.3
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARP 275
+T S+S+ + P + S + S ++++S L +T + V + TP T S+A
Sbjct: 1221 STPITSSSVLNSSTPITSSSI-LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTA-- 1277
Query: 276 ELASTFPVPSSSILN 320
L ++ P+ SSS+LN
Sbjct: 1278 -LNTSIPITSSSVLN 1291
Score = 25.8 bits (54), Expect = 2.3
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARP 275
+T S+S+ + P + S + + ++++S L +T + V T TP T S+A
Sbjct: 2721 STPITSSSVLNSSTPITSSTV-VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTA-- 2777
Query: 276 ELASTFPVPSSSILN-PL*LTRSALAHTDS 362
L ++ P+ SSS+LN +T S + +T +
Sbjct: 2778 -LNTSTPITSSSVLNSSTPITSSTVVNTST 2806
Score = 25.8 bits (54), Expect = 2.3
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +3
Query: 114 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSARPELASTF 293
S +L T S S + + + I STA N +T S + ++ + SS+ L S+
Sbjct: 3303 STTLNTSTPITSSSVLNSSTAITSSTALNTSTP--ITSSSVLNSSTAITSSSI--LNSST 3358
Query: 294 PVPSSSILN 320
PV SSS+LN
Sbjct: 3359 PVTSSSVLN 3367
Score = 25.4 bits (53), Expect = 3.1
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 114 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARPELAST 290
S +L T S S + + + I ST N +T + + T TP T SS L S+
Sbjct: 1875 STALNTSTPITSSSVLNSSTPITSSTVLNSSTP--ITSSTALNTSTPITSSSV---LNSS 1929
Query: 291 FPVPSSSILN 320
P+ SSS+LN
Sbjct: 1930 TPITSSSVLN 1939
Score = 25.4 bits (53), Expect = 3.1
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 114 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARPELAST 290
S +L T S S + + + I ST N +T + + T TP T SS L S+
Sbjct: 2067 STALNTSTPITSSSVLNSSTPITSSTVLNSSTP--ITSSTALNTSTPITSSSV---LNSS 2121
Query: 291 FPVPSSSILN 320
P+ SSS+LN
Sbjct: 2122 TPITSSSVLN 2131
Score = 25.0 bits (52), Expect = 4.1
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 114 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARPELAST 290
S L T S S + + + I ST N +T + + T TP T SS L S+
Sbjct: 939 STGLNTSTPITSSSVLNSSTPITSSTVLNSSTP--ITSSTALNTSTPITSSSV---LNSS 993
Query: 291 FPVPSSSILN 320
P+ SSS+LN
Sbjct: 994 TPITSSSVLN 1003
Score = 24.6 bits (51), Expect = 5.4
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 153 SEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARPELASTFPVPSSSILN 320
S S ++++S L +T S + T TP T SS L S+ P+ SSSILN
Sbjct: 374 SPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV---LNSSTPITSSSILN 427
Score = 24.2 bits (50), Expect = 7.1
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSAR 272
+T S+++ + P S S + + + I ST N +TR S + + TP T S+
Sbjct: 549 STPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTP--ITRYSVLNSSTPITSSTV- 605
Query: 273 PELASTFPVPSSSILN 320
L S+ P+ SSS+LN
Sbjct: 606 --LNSSTPITSSSVLN 619
Score = 24.2 bits (50), Expect = 7.1
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 171 SCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARPELASTFPVPSSSILN 320
S ++++S L +T + + T TP T SS L S+ P+ SSS+LN
Sbjct: 608 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSVLN 655
Score = 24.2 bits (50), Expect = 7.1
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 183 LSTASNLMVRCHLTRPSGVET-TPSTRSSARPELASTFPVPSSSILN 320
++++S L +T + + T TP T SS L S+ P+ SSSILN
Sbjct: 720 ITSSSVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSILN 763
Score = 24.2 bits (50), Expect = 7.1
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 99 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSAR 272
+T S+S+ + P S S + + + I ST N +T S + + TP T S+
Sbjct: 753 STPITSSSILNSSTPITSSSVLNSSTPITSSTVVNTSTP--ITSSSVLNSSTPITSSTV- 809
Query: 273 PELASTFPVPSSSILN-PL*LTRSALAHTDS 362
L S+ P+ SSS+LN +T S + +T +
Sbjct: 810 --LNSSTPITSSSVLNSSTPITSSTVVNTST 838
Score = 24.2 bits (50), Expect = 7.1
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSARP 275
+T S+++ + P + S + S +++++ L +T S + + TP T S+
Sbjct: 1041 STPITSSTVVNTSTPITSSTV-VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV-- 1097
Query: 276 ELASTFPVPSSSILN-PL*LTRSALAHTDS 362
L S+ P+ SSS+LN +T S + +T +
Sbjct: 1098 -LNSSTPITSSSVLNSSTPITSSTVVNTST 1126
Score = 24.2 bits (50), Expect = 7.1
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSAR 272
+T S+S+ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 1989 STPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTP--ITSSTVVNSSTPITSSTA- 2045
Query: 273 PELASTFPVPSSSILN 320
L ++ P+ SSS+LN
Sbjct: 2046 --LNTSTPITSSSVLN 2059
Score = 23.8 bits (49), Expect = 9.4
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +3
Query: 99 NTKCVSASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCHLTRPSGVET-TPSTRSSAR 272
+T S+S+ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 453 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP--ITSSTVVNSSTPITSSTA- 509
Query: 273 PELASTFPVPSSSILN 320
L ++ P+ SSS+LN
Sbjct: 510 --LNTSTPITSSSVLN 523
Score = 23.8 bits (49), Expect = 9.4
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +3
Query: 99 NTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSARPE 278
+T S++ + P + S + S A++++S + +T S + ++ + SS+
Sbjct: 3069 STPITSSTALNTSTPITSSSV-LNSSTAITSSSIVNSSTPITSSSVLNSSTAITSSSI-- 3125
Query: 279 LASTFPVPSSSILN 320
L S+ P+ SSSILN
Sbjct: 3126 LNSSTPITSSSILN 3139
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 27.1 bits (57), Expect = 1.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 265 EERVEGVVSTPDGLVKWHLTIRLDAVLKAIQLPAGISDLDSGL 137
EE EG TP K +T+R D+V++ + AG++D+ S L
Sbjct: 320 EEISEGEEYTPIEESKEPITVRRDSVIQIDESSAGLTDVISEL 362
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 1.3
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +3
Query: 90 KKLNTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSA 269
K LN V+ +A + S P+ +C + + + N + + TTP+T S
Sbjct: 82 KFLNKDFVTVDPLRIASVTTYSAQPSNNCSSATDSENDFQSFTIKSSTTYHTTPTTASEN 141
Query: 270 RPELASTFPVPSSSILNPL*LT 335
+ + T P +S+ N L L+
Sbjct: 142 KKIESITIP-DHASVYNDLPLS 162
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 228 PSGVETTPSTRSSARPELASTFPV 299
P+ VETTPST +SA + + F +
Sbjct: 350 PANVETTPSTATSAPKKSTAPFAI 373
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 2.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 225 RPSGVETTPSTRSSARPELASTFPVPSSS 311
+PSGVE T ++R++A+ + ST + S +
Sbjct: 45 KPSGVEPTNTSRANAQKKTESTGKITSEA 73
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 2.3
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 141 PESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 320
P S S + LST+S ++ T SG PST SS+ P +S P +S+L+
Sbjct: 483 PISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPST-SSSTPS-SSIISSPMTSVLS 540
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 24.6 bits (51), Expect = 5.4
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 174 CIALSTASNLMVRCHLTRPSGVETTPSTRSSARPELASTFPVPSSSIL 317
CI L SN VRC PS E +S L++ P SI+
Sbjct: 574 CILLIRESNCFVRCF---PSRAELGSQNSTSLSRNLSTVNPYDEGSII 618
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 24.2 bits (50), Expect = 7.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 236 PRWSCQMASDHQVGCRAQGNTAPSRHFRSGLR 141
P SC++ S+H+ C + N++ S + + R
Sbjct: 110 PHLSCELPSEHREKCLKRRNSSLSSNLHANKR 141
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 276 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNL 383
E+ F VP +S LNP S +TD +++ N+
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNI 253
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 24.2 bits (50), Expect = 7.1
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 96 LNTKCVSASLYTLAKPESRSEMPAGSCIALSTASNLMVRCHLTRPSGVETTPSTRSSA 269
LNT C+ + + + +E A S I+ TA NL+ C L+ P +P+ +++A
Sbjct: 132 LNTFCLGKTAPSDKNRYTTTECLACSKISNETAENLLFLC-LSSPWIFRASPTLQNTA 188
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.2 bits (50), Expect = 7.1
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Frame = +3
Query: 207 VRCHLTRPS------GVETTPSTRSSARPELASTFPVPSSSILNPL 326
VR H +RPS V S RP L PSSSI +PL
Sbjct: 794 VRGHQSRPSTGSQLRNVVPVSIVTSGGRPALPDEMASPSSSIGHPL 839
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 24.2 bits (50), Expect = 7.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -1
Query: 298 TGNVLASSGLAEERVEGVVSTPDGLVKWHLTIRLDAVLKAIQLPAGISDLDSGLAN 131
+GN + S E +E +S PD + K++ V+K + GI D D G N
Sbjct: 446 SGNDIEGSASYFEEIEDTISGPDSIPKFYQR----PVIKYSKF--GIEDFDFGFYN 495
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 24.2 bits (50), Expect = 7.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 265 EERVEGVVSTPDGLVKWHLTIRLDAVLKAIQLPAGISDLDSGLANVY 125
E+ V GVV + + W L++ LD + + G+ D+ L ++
Sbjct: 399 EDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIH 445
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 196 DAVLKAIQLPAGISDLDSGLANV 128
+AVLK I GI + D+GLA +
Sbjct: 55 EAVLKRINDTVGIKESDTGLAPI 77
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 23.8 bits (49), Expect = 9.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 167 WELYCLEHGIQPDGQMPFDKTI 232
WELYC E G +M KTI
Sbjct: 289 WELYCQEAGGIIGDEMGLGKTI 310
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 23.8 bits (49), Expect = 9.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 385 DKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVST 236
D+L + L + SA + G+ D+D NV+A G ++R E + T
Sbjct: 330 DQLTPITPLMLALSAGTPAFRGYLADQDCRWNVIA--GAVDDRTEEEMKT 377
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 23.8 bits (49), Expect = 9.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 206 GQMPFDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 310
G+ PFD+ + +DSF F+ HVPR V++
Sbjct: 37 GRQPFDEGLSINEDSF--FYRH---NIHVPRIVYL 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,695,644
Number of Sequences: 5004
Number of extensions: 34462
Number of successful extensions: 166
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 126307516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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