Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K04
         (284 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   0.18 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   2.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   3.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    21   8.9  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 128 IEADSEKLEKVISELNGKNVE 190
           + A  +KLE V+ EL GKN E
Sbjct: 926 VSATQDKLEDVVEELEGKNRE 946


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 89  AAADVEKILSSVGIEADSEKLEKVISELNGKNVEELIEAGR 211
           A ADVE+ +  V      +KLE++++  N K     +E  R
Sbjct: 394 ACADVEQTIHLVEKFKKRKKLEEILNGGNPKGTLVFVETKR 434


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -3

Query: 126 PTELRIFSTSAAAGDALPPNTASNTRPRNAFFKSLRH 16
           P E + F  S  A   + P  AS  R    F +  RH
Sbjct: 433 PAECKEFGLSDLAAGVVAPLLASRLREWKPFSEPTRH 469


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 104 EKILSSVGIEADSEKLEKVISELNGKNVEELIEA 205
           E   S + +E    KLE +++    +  +EL++A
Sbjct: 813 EAFTSRMSLEVTKNKLENLLTNNLFRRKDELVQA 846


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,890
Number of Sequences: 2352
Number of extensions: 3173
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16950141
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)