Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_K02
         (107 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   0.43 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   1.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          22   2.3  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          22   2.3  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          22   2.3  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          22   2.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    20   9.2  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +2

Query: 8   GGTGTSGGDQP--TFQEEGGDDDLYS*T 85
           GG G   G+ P       GGDDDL+S T
Sbjct: 416 GGVGPCFGEPPLPALPLPGGDDDLFSPT 443


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 8    GGTGTSGGDQPTFQEEGGDDD 70
            GG G  GG++    +E  DDD
Sbjct: 1716 GGGGGGGGEEDGSDKEEDDDD 1736


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 8   GGTGTSGGDQPTFQ 49
           GGTGTS G   +FQ
Sbjct: 255 GGTGTSSGGGGSFQ 268


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 8   GGTGTSGGDQPTFQ 49
           GGTGTS G   +FQ
Sbjct: 255 GGTGTSSGGGGSFQ 268


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 8   GGTGTSGGDQPTFQ 49
           GGTGTS G   +FQ
Sbjct: 255 GGTGTSSGGGGSFQ 268


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 8   GGTGTSGGDQPTFQ 49
           GGTGTS G   +FQ
Sbjct: 255 GGTGTSSGGGGSFQ 268


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 8   GGTGTSGG 31
           GGTGT GG
Sbjct: 204 GGTGTGGG 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,733
Number of Sequences: 2352
Number of extensions: 706
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 16
effective length of database: 526,347
effective search space used: 10000593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)