Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_J23
(323 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC129941-1|AAI29942.1| 232|Homo sapiens LHFPL3 protein protein. 73 2e-13
BC129938-1|AAI29939.1| 232|Homo sapiens LHFPL3 protein protein. 73 2e-13
BC129937-1|AAI29938.1| 236|Homo sapiens lipoma HMGIC fusion par... 73 2e-13
AY260763-1|AAP14954.1| 236|Homo sapiens lipoma HMGIC fusion-par... 73 2e-13
AY278320-1|AAP37013.1| 247|Homo sapiens lipoma HMGIC fusion par... 71 1e-12
BC113964-1|AAI13965.1| 232|Homo sapiens LOC375323 protein protein. 62 5e-10
BC028630-1|AAH28630.1| 219|Homo sapiens lipoma HMGIC fusion par... 59 3e-09
AL157823-8|CAI21643.1| 219|Homo sapiens protein ( nding protein... 59 3e-09
BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1 (Dros... 30 1.4
BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1 (Dros... 30 1.4
AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens ... 30 1.4
AK056189-1|BAB71116.1| 417|Homo sapiens se I.2 (MGAT1.2) mRNA. ... 30 1.4
AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting l... 30 1.4
BC070125-1|AAH70125.1| 185|Homo sapiens ABCA6 protein protein. 28 7.4
>BC129941-1|AAI29942.1| 232|Homo sapiens LHFPL3 protein protein.
Length = 232
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD 287
+++ LY TNYVRN +AIGVLWAIFTIC+AI+ +V F+ P WIGD
Sbjct: 20 EAAKLYHTNYVRNSRAIGVLWAIFTICFAIVNVVCFIQPYWIGD 63
>BC129938-1|AAI29939.1| 232|Homo sapiens LHFPL3 protein protein.
Length = 232
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD 287
+++ LY TNYVRN +AIGVLWAIFTIC+AI+ +V F+ P WIGD
Sbjct: 20 EAAKLYHTNYVRNSRAIGVLWAIFTICFAIVNVVCFIQPYWIGD 63
>BC129937-1|AAI29938.1| 236|Homo sapiens lipoma HMGIC fusion
partner-like 3 protein.
Length = 236
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD 287
+++ LY TNYVRN +AIGVLWAIFTIC+AI+ +V F+ P WIGD
Sbjct: 20 EAAKLYHTNYVRNSRAIGVLWAIFTICFAIVNVVCFIQPYWIGD 63
>AY260763-1|AAP14954.1| 236|Homo sapiens lipoma HMGIC
fusion-partner-like protein protein.
Length = 236
Score = 73.3 bits (172), Expect = 2e-13
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD 287
+++ LY TNYVRN +AIGVLWAIFTIC+AI+ +V F+ P WIGD
Sbjct: 20 EAAKLYHTNYVRNSRAIGVLWAIFTICFAIVNVVCFIQPYWIGD 63
>AY278320-1|AAP37013.1| 247|Homo sapiens lipoma HMGIC fusion
partner-like protein 4 protein.
Length = 247
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD-LETEYPRKSGLW 323
++S LY +Y+RN +AIGVLWAIFTIC+AII +V F+ P W+GD + T P GL+
Sbjct: 6 EASKLYHEHYMRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLF 62
>BC113964-1|AAI13965.1| 232|Homo sapiens LOC375323 protein protein.
Length = 232
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +3
Query: 186 VRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD-LETEYPRKSGLW 323
+RN +AIGVLWAIFTIC+AII +V F+ P W+GD + T P GL+
Sbjct: 1 MRNSRAIGVLWAIFTICFAIINVVVFIQPYWVGDSVSTPKPGYFGLF 47
>BC028630-1|AAH28630.1| 219|Homo sapiens lipoma HMGIC fusion
partner-like 5 protein.
Length = 219
Score = 59.3 bits (137), Expect = 3e-09
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD 287
+++ +Y TNYVRN +A+GV+W TIC++++ + F+ P WIGD
Sbjct: 9 EAAKIYHTNYVRNSRAVGVMWGTLTICFSVLVMALFIQPYWIGD 52
>AL157823-8|CAI21643.1| 219|Homo sapiens protein ( nding protein 5
(FKBP51), four ).).
Length = 219
Score = 59.3 bits (137), Expect = 3e-09
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +3
Query: 156 DSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGD 287
+++ +Y TNYVRN +A+GV+W TIC++++ + F+ P WIGD
Sbjct: 9 EAAKIYHTNYVRNSRAVGVMWGTLTICFSVLVMALFIQPYWIGD 52
>BC114940-1|AAI14941.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RSDESDNAYNRVTDREYSPEN 210
R SDNA N VT+R+YSP++
Sbjct: 679 RKSRSDNALNLVTERKYSPKD 699
>BC114939-1|AAI14940.1| 831|Homo sapiens prickle homolog 1
(Drosophila) protein.
Length = 831
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RSDESDNAYNRVTDREYSPEN 210
R SDNA N VT+R+YSP++
Sbjct: 679 RKSRSDNALNLVTERKYSPKD 699
>AK056499-1|BAB71198.1| 831|Homo sapiens protein ( Homo sapiens
cDNA FLJ31937 fis, clone NT2RP7006527, moderately
similar to LIM-ONLY PROTEIN 6. ).
Length = 831
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RSDESDNAYNRVTDREYSPEN 210
R SDNA N VT+R+YSP++
Sbjct: 679 RKSRSDNALNLVTERKYSPKD 699
>AK056189-1|BAB71116.1| 417|Homo sapiens se I.2 (MGAT1.2) mRNA.
protein.
Length = 417
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RSDESDNAYNRVTDREYSPEN 210
R SDNA N VT+R+YSP++
Sbjct: 265 RKSRSDNALNLVTERKYSPKD 285
>AF399844-1|AAQ03035.1| 831|Homo sapiens REST/NRSF-interacting lim
domain protein protein.
Length = 831
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 272 RSDESDNAYNRVTDREYSPEN 210
R SDNA N VT+R+YSP++
Sbjct: 679 RKSRSDNALNLVTERKYSPKD 699
>BC070125-1|AAH70125.1| 185|Homo sapiens ABCA6 protein protein.
Length = 185
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 195 PKAIGVLWAIFTICYAIIGIVAFVTPEWIGDLETEYPRKSGLW 323
P A+G+++ T Y +I + +P W D ++P + LW
Sbjct: 122 PYAMGIIFNE-TFSYKLIFFQGYNSPRWKEDFSGDFPYQISLW 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,771,502
Number of Sequences: 237096
Number of extensions: 896918
Number of successful extensions: 5237
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5237
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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