Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_J23
         (323 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-4|CAB02318.1|  229|Caenorhabditis elegans Hypothetical pr...    39   7e-04
Z71177-1|CAA94865.3|  355|Caenorhabditis elegans Hypothetical pr...    29   1.0  
AC024843-10|AAF60845.2|  526|Caenorhabditis elegans Hypothetical...    28   1.8  
U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical pr...    26   5.4  
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ...    26   5.4  
Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical pr...    26   7.2  
Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical pr...    26   7.2  
Z78546-7|CAB01772.1|  375|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z47358-9|CAA87434.3|  436|Caenorhabditis elegans Hypothetical pr...    25   9.5  
U41540-1|AAM54184.1|   92|Caenorhabditis elegans Hypothetical pr...    25   9.5  
AL023830-4|CAA19474.1|  375|Caenorhabditis elegans Hypothetical ...    25   9.5  

>Z80223-4|CAB02318.1|  229|Caenorhabditis elegans Hypothetical
           protein F26D10.11 protein.
          Length = 229

 Score = 39.1 bits (87), Expect = 7e-04
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 171 YATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWIGDLETEY 302
           Y + Y RN + +G +W +  +C  ++  +A + P WIG  E  Y
Sbjct: 8   YHSIYTRNWRVVGAIWVLCGLCTTVLQTLALIHPTWIGSDEGGY 51


>Z71177-1|CAA94865.3|  355|Caenorhabditis elegans Hypothetical
           protein AC3.1 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 165 HLYATNYVRNPKAIGVLWAIFTICYAIIG 251
           H+ A+NY ++   +  L A FT C+ I+G
Sbjct: 239 HISASNYAKHRATLRSLLAQFTTCFLIVG 267


>AC024843-10|AAF60845.2|  526|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.1 protein.
          Length = 526

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 123 INKMGSKIE-YVDSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVTPEWI 281
           +N+  ++IE +++SS +  T +  +   + +LW++  +C+ I  I       W+
Sbjct: 60  LNQPYAQIEQFINSSWIERTGHPISDSTLHLLWSLLNVCFPIATIFGQFLAGWM 113


>U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical
           protein T10E9.1 protein.
          Length = 389

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 126 NKMGSKIEYVDSSHLYATNYVRNPKAIGVLWAIFTIC 236
           NK    ++ ++SS    + + RNP+   +LW +F  C
Sbjct: 139 NKFMETLDNMESSLKVQSIFWRNPRKCDLLWKMFDKC 175


>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
           protein Y39A1B.2 protein.
          Length = 1003

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 138 SKIEYVDSSHLYATNYVRNPKAIGVLWAIFTICYAIIGIVAFVT 269
           S I Y   + + A + +  P+ +  LW  F+I    IGI+ F+T
Sbjct: 710 SSIAYAGVA-VVAVSLILIPEPVASLWVSFSIVSINIGILGFMT 752


>Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical
           protein F57B7.1b protein.
          Length = 441

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 192 NPKAIGVLWAIFTICYAIIGIVAFVTPEWI 281
           +PK     WA+F I +A + +VA  +  W+
Sbjct: 99  HPKHWSYSWALFLIAHAHLSLVAHSSSVWL 128


>Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical
           protein F57B7.1a protein.
          Length = 510

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 192 NPKAIGVLWAIFTICYAIIGIVAFVTPEWI 281
           +PK     WA+F I +A + +VA  +  W+
Sbjct: 99  HPKHWSYSWALFLIAHAHLSLVAHSSSVWL 128


>Z78546-7|CAB01772.1|  375|Caenorhabditis elegans Hypothetical
           protein T21H8.4 protein.
          Length = 375

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 180 NYVRNPKAIGVLWAIFTICYAIIGIVAFVTPE 275
           NY R  +A+G + AI  +  A   I   + PE
Sbjct: 130 NYERQGRALGTILAIVAVAVAATAIFILLLPE 161


>Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical
           protein B0024.10 protein.
          Length = 552

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 10  IDTQKTFMYLY*KKK*TCVDNSVVCCVRCNKKY 108
           +D  K+F   + +   T +D SV C V  NK+Y
Sbjct: 85  LDALKSFTSEFKEDLATTIDGSVPCIVYMNKRY 117


>Z47358-9|CAA87434.3|  436|Caenorhabditis elegans Hypothetical
           protein ZK1307.7 protein.
          Length = 436

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -2

Query: 133 ILFISGCYNTFCY--XGHNKQHYYQHMFTSFF 44
           I FIS C+NTF +     N +H + H+    F
Sbjct: 52  IAFISVCFNTFLFVVLCRNPRHRHSHLVYLMF 83


>U41540-1|AAM54184.1|   92|Caenorhabditis elegans Hypothetical
           protein F35H12.6 protein.
          Length = 92

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 162 SHLYATNYVRNPKAIGVLWAI--FTICYAII 248
           SH Y+ N V+N  A   +WAI  F IC  +I
Sbjct: 16  SHEYSLNTVQNGLAGVPMWAIWSFVICAVLI 46


>AL023830-4|CAA19474.1|  375|Caenorhabditis elegans Hypothetical
           protein T21H8.4 protein.
          Length = 375

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 180 NYVRNPKAIGVLWAIFTICYAIIGIVAFVTPE 275
           NY R  +A+G + AI  +  A   I   + PE
Sbjct: 130 NYERQGRALGTILAIVAVAVAATAIFILLLPE 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,497,013
Number of Sequences: 27780
Number of extensions: 149616
Number of successful extensions: 348
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)