Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_J16
(379 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 32 0.026
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.026
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.32
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 0.74
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 0.74
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 1.3
SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|c... 26 1.7
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 25 3.0
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 25 3.0
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 25 3.9
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 25 3.9
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 3.9
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 25 5.2
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 25 5.2
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 25 5.2
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 25 5.2
SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces... 25 5.2
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 25 5.2
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 25 5.2
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 24 6.9
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 24 6.9
SPAC8C9.10c |||ribosome biogenesis protein Rrp14-N|Schizosacchar... 24 9.1
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 24 9.1
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 24 9.1
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 24 9.1
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 24 9.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 24 9.1
SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr ... 24 9.1
SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|... 24 9.1
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 32.3 bits (70), Expect = 0.026
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +2
Query: 80 QKYKQVIEKKVKQETHIGKMNHSLEDSPLTDTS-LTAQKMEKWVEAQRKGEKIDIDVYGK 256
+K ++ ++ K+ + + +N L + + LT QK A +K + +D K
Sbjct: 109 RKEQKPRRRRGKRSSTVDALNDELNELGENEEEVLTEQKQLDPTLAAKKELDLQMDAVLK 168
Query: 257 PTEKQLRELEHVRNLSKELQDNLHELENSVRLAEVENQEMN 379
PT + R E NL + D + L +RLA + + E+N
Sbjct: 169 PTRTKKRSNED--NLEQMADDEVLRLREQMRLAALRDAELN 207
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 32.3 bits (70), Expect = 0.026
Identities = 19/89 (21%), Positives = 42/89 (47%)
Frame = +2
Query: 113 KQETHIGKMNHSLEDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHV 292
+++ H+ + D L +T++ Q++ K +E R D++ E+ +
Sbjct: 477 EEKNHLRLLASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKI 536
Query: 293 RNLSKELQDNLHELENSVRLAEVENQEMN 379
+++KE ++ELE ++ EV E+N
Sbjct: 537 DSITKEKDRLINELEQRIKSYEVNVSELN 565
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 28.7 bits (61), Expect = 0.32
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 149 LEDSPLTDTSLTA-QKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNL 325
+ D PL D+ + + EK + A K EK D D+Y + ++ + +LE S +N
Sbjct: 231 IADKPLKDSMFNSNSEKEKIMHALEKAEK-DADIYSEFIQQYMEQLESSLEKSSTAIENA 289
Query: 326 HE--LENSVRLAE 358
E + LAE
Sbjct: 290 QNRLAEMTAHLAE 302
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 0.74
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -3
Query: 350 NAPSSPAHVNCPAAPCSSF*RARVLAIASQSVSRKRLCRSSPLSFGLRPTSPSSAP-SDW 174
++ SSP + + SS + ++S S+S SSP S +S SS+P S
Sbjct: 295 SSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSS 354
Query: 173 YPSTENPLANDSSF 132
+ ST + + SSF
Sbjct: 355 FSSTTSSSKSSSSF 368
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 0.74
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 116 QETHIGKMN-HSLEDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLRELEHV 292
QET + +S+ +DTS E ++ ID+ + +E + L+H
Sbjct: 110 QETSYSLLEGYSVTAHDHSDTSPLPITSSNQKEGKKNVSSIDVSMVSDSSEFKPDSLQHE 169
Query: 293 RNLSKELQDNLHELENSVRLAEVE 364
+ + K Q L +L NS LA+++
Sbjct: 170 KLVKKCNQLRLQKLINSSELAQID 193
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.6 bits (56), Expect = 1.3
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 365 SPLRPNAPSSPAHVNCPAAPCSSF*RARVLAIASQSVSR-KRLCRSSPLSFGLRPTSPSS 189
+PL +AP P HV PA P +S + + + S K SS + G T PSS
Sbjct: 260 TPLSFHAPIPPLHV--PAVPLTSASHSSSDGKSRKHPSPYKPYLNSSHDTLG-SSTRPSS 316
Query: 188 APSDWYPSTENPLANDS 138
A + P+T P DS
Sbjct: 317 ADTAGSPATSPPATADS 333
>SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 26.2 bits (55), Expect = 1.7
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 263 EKQLRELEHV-RNLSKELQDNLHELENSVRLAEVENQE 373
+++LR L+ + N + +NL E E+ + L ++ENQE
Sbjct: 31 DEKLRVLQLLLANCEQSRNENLQEKEHGLTLEDLENQE 68
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 3.0
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 133 KDESFARGFSVDGYQSDGAEDGEVGRSPKERGEDRHRRLRETD*EAIARTRARQKL 300
+DE++ V+ SD VGR + + ED RR + + ++ AR K+
Sbjct: 162 EDEAYDSDLYVEEEDSDVKGRSMVGRDGRYKSEDLKRRKLQPSSKPLSSLEARAKV 217
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +2
Query: 104 KKVKQETHIGKMNHSLEDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKPTEKQLREL 283
K + + T K + L D D + +K+E +EA RK VY +K E
Sbjct: 92 KILDELTRSSKTHQKLSDDYSLDIAEKLKKLESHIEALRK-------VYDDLYKKFSSEK 144
Query: 284 EHVRNLSKELQDNLHELENSVRLAEVENQE 373
E + N K + + HE + + A +N +
Sbjct: 145 ETLLNSVKRAKVSYHEACDDLESARQKNDK 174
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.0 bits (52), Expect = 3.9
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Frame = -3
Query: 239 CRSSPLSFGLRPTSPSSAPSDWYPSTENPLAN-------DSSFQYVFPVSL 108
CRS SF L +P DW+ + + + N D+ F+Y+F L
Sbjct: 638 CRSFATSFVLDIGAPPFPTLDWFTNDSSVIQNELLRRSVDTYFRYIFQTDL 688
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 25.0 bits (52), Expect = 3.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 230 KIDIDVYGKPTEKQLRELEHVRNLSKELQDNLHELENS 343
K+ IDV ++ REL + LS ++ +H +E S
Sbjct: 769 KLTIDVISGQQLRRARELSNSETLSPYVEIQVHSMEES 806
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 25.0 bits (52), Expect = 3.9
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +2
Query: 272 LRELEHVRNLSKELQDNLHELENSVRLAEVENQEM 376
LRELE +R+L+ +++ ++E ++ + EN+ +
Sbjct: 388 LRELEELRHLATSAKEDFVKVEKLNKIIKDENENL 422
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 24.6 bits (51), Expect = 5.2
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = -3
Query: 377 SSPDSPLRPNAPSSPAHVNCPAAPCSSF*RARVLAIASQSVSRKRLCRSSPLSFGLRPTS 198
SS SP P S+ + + + P + +R ++ ++S + S G+
Sbjct: 350 SSAQSP-HPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFSAYSSSHGIHQRI 408
Query: 197 PSSAPSDWYPSTENPLAN 144
P+S P++ P+ +NP N
Sbjct: 409 PASTPTNTNPADQNPPCN 426
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 24.6 bits (51), Expect = 5.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 236 DIDVYGKPTEKQLRELEHVRNLSKELQD 319
+ID++GKPT+K +L KE D
Sbjct: 713 NIDIFGKPTKKFHEQLLEFETDEKERAD 740
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 24.6 bits (51), Expect = 5.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 263 EKQLRELEHVRNLSKELQDNLHELENSVRLAEVEN 367
+K+L+E + + +KEL + + LE VR E+EN
Sbjct: 284 KKKLKE-QQLERTAKELTEKVAILETRVRELEMEN 317
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 24.6 bits (51), Expect = 5.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 221 KGEKIDIDVYGKPTEKQLRELEHVRNLSKELQDNLHELENSVRL 352
+ ++D + K E+ EL V + L+D E EN+V+L
Sbjct: 5 QSSEVDPNTKNKNAEEMFNELNKVPFFMQSLEDVGDESENNVQL 48
>SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 199
Score = 24.6 bits (51), Expect = 5.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 240 MSIFSPFLWASTHFSIFCAVRLVSVNGESSSE*FIFPICVSCFTF 106
MS+FS LW +T SI + ++ N S + F + S +T+
Sbjct: 1 MSLFSTSLWTTTVMSIIVGLYMLFHNSGESFDFGSFLLDTSPYTW 45
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 24.6 bits (51), Expect = 5.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 248 YGKPTEKQLRELEHVRNLSKELQDNLHEL 334
+ P E + +EH L K+++D H L
Sbjct: 589 FENPNEGEKEIVEHYETLHKKIEDKFHTL 617
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 24.6 bits (51), Expect = 5.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 242 DVYGKPTEKQLRELEHVRNLSKELQDNLHELE 337
D Y P+ R+ +++ L+K LQD+L ELE
Sbjct: 5 DAYHWPSRTPSRKGSNIK-LNKTLQDHLDELE 35
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 24.2 bits (50), Expect = 6.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 272 LRELEHVRNLSKELQDNLHELENSVRLAEVE 364
L++LE LS+ +LH L ++++++E+E
Sbjct: 370 LKDLETFLKLSRYESFSLHYLMSNIKISEIE 400
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 24.2 bits (50), Expect = 6.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 263 EKQL-RELEHVRNLSKELQDNLHELENSVRLAEVENQEM 376
E+QL +L+H+ L +EL+ LEN + E Q M
Sbjct: 95 EQQLYSDLDHINVLQQELKVETARLENEQKSYEEMKQNM 133
>SPAC8C9.10c |||ribosome biogenesis protein
Rrp14-N|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 23.8 bits (49), Expect = 9.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 80 QKYKQVIEKKVKQETHIGKMNHSLEDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKP 259
QK + EKK ++ KM SL D + D +QK KW ++ + D+
Sbjct: 38 QKKSTLEEKKERR-----KMKFSL-DGLVNDADDDSQKSSKWEQSSTMSDDTDVSDRHAE 91
Query: 260 TEKQLR 277
+ Q+R
Sbjct: 92 SMSQIR 97
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 23.8 bits (49), Expect = 9.1
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 155 DSPLTDTSLTAQKMEKWVEAQRKGE-KIDIDVYGKPTEKQLRELEHVRN 298
D P D+ ++K+EK E +RK E + + + E L E E N
Sbjct: 384 DEPQKDSKDDSEKVEKETEVERKEENEAEAEAVFDDWEAALEEPEVAEN 432
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 23.8 bits (49), Expect = 9.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 362 PLRPNAPSSPAHVNCP 315
P++PN P+ P H+ P
Sbjct: 1000 PIKPNKPTKPDHLVAP 1015
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 23.8 bits (49), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 260 SVSRKRLCRSSPLSFGLRPTSPSSAPSDWYP 168
++S LC + P S GL + AP W P
Sbjct: 110 ALSMAELCSAMPTSGGLYYAAAVLAPEGWGP 140
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 23.8 bits (49), Expect = 9.1
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 263 EKQLRELEHVRNLSKELQDNLHELENSVRLAEVE 364
E+ RE+ ++ + E+++ ++E E+++ EVE
Sbjct: 716 ERLFREINDLQIQNAEMKEQVYEKESTISQKEVE 749
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 23.8 bits (49), Expect = 9.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 284 EHVRNLSKELQDNLHELENSVR 349
E +RN+ K D L +LEN+V+
Sbjct: 1184 ERIRNIKKLKTDMLTKLENTVK 1205
>SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 284
Score = 23.8 bits (49), Expect = 9.1
Identities = 6/20 (30%), Positives = 16/20 (80%)
Frame = +2
Query: 278 ELEHVRNLSKELQDNLHELE 337
E++H+R+ ++++DN+ +E
Sbjct: 24 EIDHIRDAIRQIEDNVGRIE 43
>SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|chr
2|||Manual
Length = 403
Score = 23.8 bits (49), Expect = 9.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 269 QLRELEHVRNLSKELQDNLHELENSVRLAEVENQEM 376
++R E V L + N H+L+ S++LAE +N+ +
Sbjct: 241 RIRMREIVETLGR--LSNKHDLDFSIKLAEAKNRHV 274
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,322,420
Number of Sequences: 5004
Number of extensions: 24298
Number of successful extensions: 146
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 122233080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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