BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_J13
(336 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1308 - 26024491-26025405 34 0.033
10_08_0102 + 14810293-14811345,14811989-14812108,14812745-148127... 31 0.18
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 31 0.31
04_04_1221 + 31845938-31847038 31 0.31
10_08_0068 + 14624376-14624975,14625113-14625601 30 0.53
10_08_0065 + 14596257-14597417 29 0.71
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 29 0.71
11_04_0095 + 13429895-13431019 29 1.2
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 28 1.6
07_01_0117 + 894314-896677 28 2.2
04_03_0991 - 21500143-21500799,21500834-21501172 28 2.2
02_02_0618 - 12190727-12191698 28 2.2
12_01_0252 + 1868670-1869200,1870167-1871120 27 2.9
11_01_0252 + 1934505-1935032,1936001-1936957 27 2.9
10_08_0055 - 14505747-14506934 27 2.9
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202 27 2.9
11_04_0224 + 15059904-15059910,15059955-15060185,15060345-150604... 27 3.8
08_02_1251 - 25592537-25593380,25593589-25593893 27 3.8
08_02_0580 - 18953208-18953513,18953668-18953868,18953929-189540... 27 3.8
08_01_0177 + 1504472-1505033,1505035-1506647 27 3.8
03_06_0266 + 32746379-32746836,32747898-32748273,32748367-327486... 27 3.8
02_03_0120 + 15463163-15465250 27 3.8
12_02_0098 + 13592581-13593120,13595729-13596668,13596879-135975... 27 5.0
11_06_0415 + 23306555-23306794,23306842-23307684 27 5.0
10_08_0066 + 14610220-14610798,14610928-14611287 27 5.0
07_01_1036 + 9021395-9021658,9024214-9024690 27 5.0
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 27 5.0
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263... 27 5.0
11_01_0069 - 557951-558412,558508-558684,559359-559523 26 6.6
10_01_0233 + 2471628-2471898,2474289-2475101,2475468-2475655 26 6.6
08_02_1310 - 26037025-26038074 26 6.6
08_01_1061 - 10804269-10804352,10804464-10804593,10804696-108047... 26 8.7
04_04_1219 + 31835854-31836105,31836481-31837152 26 8.7
02_05_1032 + 33637108-33638421 26 8.7
>08_02_1308 - 26024491-26025405
Length = 304
Score = 33.9 bits (74), Expect = 0.033
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLLQ 336
AAA Y L L+ C + ++V + + + IHA+++G +L C F +Q
Sbjct: 216 AAADRYDLSRLKLMCAQKLWEAVSVDTVATTLIHAEMHGCPELKSSCLDFFVQ 268
>10_08_0102 +
14810293-14811345,14811989-14812108,14812745-14812792,
14812886-14813006,14814073-14814129,14815109-14815217,
14815298-14815523,14815608-14815724,14816041-14816119,
14816303-14816325,14816698-14816742,14816872-14817030
Length = 718
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AAA Y + L+ CEA+ K +++ ++ S+ I A +G + L C FL
Sbjct: 270 AAADRYGMERLRLLCEAQLCKHIEVASVASILILADQHGCSGLKNACFEFL 320
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLLQ 336
AA Y L L+R CE A+ V++ N+ +Y ++ + A L C F+L+
Sbjct: 662 AADQYLLEGLKRLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILE 713
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 65 VQINDIRYHIFEQVMKYLYSGGCASLDIPETDVLEVRRQRL 187
++I +IR+++FE +M+++Y+G D+L Q L
Sbjct: 627 IEIPNIRWNVFELMMRFIYTGSVEVTSDISQDLLRAADQYL 667
>04_04_1221 + 31845938-31847038
Length = 366
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA Y + L+ CE R ++++D+ + + + A+ + +QL + C GF+
Sbjct: 275 AADRYGVDRLRLICERRLSETIDVETVATTLVLAEQHHCSQLRQACIGFV 324
>10_08_0068 + 14624376-14624975,14625113-14625601
Length = 362
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA Y L ++ CE +K +D ++V++ + A+ + L E C FL
Sbjct: 277 AADRYNLERMKLICEHNLSKHIDTDSVVNILVLAEQHSCHMLKEACLKFL 326
>10_08_0065 + 14596257-14597417
Length = 386
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA Y L L+ CE + +K++D ++ ++ + A+ + L E C FL
Sbjct: 273 AADRYNLERLKLICEDKLSKNIDTGSIANILLLAEKHSCHALKEACFEFL 322
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 29.5 bits (63), Expect = 0.71
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 MLAPPRTSNESMPPASTAPPLVQINDIRYHIFEQVMKYLYSGGCASLDIPETDVL--EVR 175
++ P +E +P + ++D +E+ KYL G LD+ E L E+
Sbjct: 207 LMRPWCNEDEQVPQLTPFKISHGVSDTMMKQYEEDYKYLVEEG---LDLEEMKKLYHELM 263
Query: 176 RQRLPSTSCYHFKDTVKRERPNLSTYITLSL 268
R+ C H K+TV+ ER Y + ++
Sbjct: 264 RKYQQIIHCSHSKETVRLERVTYKQYSSCNI 294
>11_04_0095 + 13429895-13431019
Length = 374
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AAA+ Y + LQ CE +S+ + + S + A+ +G L C FL
Sbjct: 288 AAAARYGMERLQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFL 338
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 5 LAPPRTSNESMPPASTAPPLVQINDIRY 88
L PP + PP +T PP + D RY
Sbjct: 66 LPPPEQQKQQQPPPTTPPPAPRRRDPRY 93
>07_01_0117 + 894314-896677
Length = 787
Score = 27.9 bits (59), Expect = 2.2
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 14 PRTSNESMPPASTAPPLVQINDIRYHIFEQVMKYLYSGGCASLDIPET--DVLEVRRQRL 187
PR +++S+ +S + L + N ++ Q Y GG AS IPE+ + +
Sbjct: 572 PRPNHDSVVLSSGSTSLAK-NGLQDKFIRQYASTSYHGGSASTIIPESKGNQASIILTWH 630
Query: 188 PSTSCYHFKDTVKRERPNLSTYITLSLFIFMLRFTVLHNY 307
+T CY KD +R++ +T L + + T L Y
Sbjct: 631 AATGCYD-KDYEQRKKMKATTESPLQHRQYRVVATALSKY 669
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AAAS Y++ L+ CE + + V+ +VS+ A+ + L E C FL
Sbjct: 268 AAASRYKMERLRLVCEHKLCEYVNGRTVVSMLAFAREHHCDGLKEKCLRFL 318
>02_02_0618 - 12190727-12191698
Length = 323
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA +Y + L+ CE + AK +D + + + A+ + L E C FL
Sbjct: 268 AADWYNVGRLKLICEEKLAKHIDCNMVATTLALAEQHSCQGLKEACLEFL 317
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 44 ASTAPPLV-QINDIRYHIFEQVMKYLYSGGCASLDIPETDVL 166
A P LV ++ IRY + V+++LYSG AS+ P++ L
Sbjct: 97 APATPELVIPVSSIRYEVLVLVLQFLYSGQ-ASVAAPKSGPL 137
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 44 ASTAPPLV-QINDIRYHIFEQVMKYLYSGGCASLDIPETDVL 166
A P LV ++ IRY + V+++LYSG AS+ P++ L
Sbjct: 96 APATPELVIPVSSIRYEVLVLVLQFLYSGQ-ASVAAPKSGPL 136
>10_08_0055 - 14505747-14506934
Length = 395
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA Y L L+ CE R K +D ++ ++ A+ + L E C FL
Sbjct: 299 AADRYNLERLKLICEDRLCKHIDGESVATILALAEQHSCDGLKEACFQFL 348
>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
Length = 580
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 187 SFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVY 291
+F L L+ H + R KS+ +H+LV Y HA+ Y
Sbjct: 273 TFRNLKHLKDHIK-RPLKSLHIHSLVDAYEHARNY 306
>11_04_0224 +
15059904-15059910,15059955-15060185,15060345-15060424,
15060497-15060547,15060548-15060670,15062151-15062184,
15062363-15062441,15062779-15062848,15075787-15075889,
15076247-15076284,15076449-15076550,15077027-15077107,
15077506-15077657,15077731-15077857,15078193-15078311,
15078636-15078749,15079001-15079214
Length = 574
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 166 QYICLRYI*TGAPSRVKVFHYLLKN 92
QY C RY+ + V++F+Y +K+
Sbjct: 26 QYYCCRYVEVNESTSVRLFYYFVKS 50
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLL 333
AAA Y+L L+ C + +S+ + + +AK+ G ++L C LL
Sbjct: 312 AAAHEYKLDRLKLMCARKLEESLSVETVARTLGYAKMCGCSELKSKCLDLLL 363
>08_02_0580 -
18953208-18953513,18953668-18953868,18953929-18954009,
18954096-18954410,18954493-18954636,18954733-18954822,
18954907-18954983,18955122-18955182,18955264-18955490,
18955581-18955740,18955825-18956025,18956114-18956209,
18956380-18956565,18956641-18956810,18957044-18957275,
18958652-18959029
Length = 974
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 38 PPASTAPPLVQINDIRYHIFEQVMKYLYSGGCASLDIPETDVLEVRRQRLP 190
P A APP+ D +Y + E +L+SGG + ++E R+ P
Sbjct: 69 PAALVAPPIPPCED-KYFVREPCYDFLWSGGGGAGSARVAGIVEAIRRNNP 118
>08_01_0177 + 1504472-1505033,1505035-1506647
Length = 724
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 166 GGSSAAASFYQLLPLQRHCEARA-AKSVDLHNLVSVYIHAK 285
GG AAA+ +L+ ++ HCE A A+S N +V +H K
Sbjct: 236 GGGEAAANDGELVVIKTHCEFPAIARSTPRDNF-AVLLHVK 275
>03_06_0266 +
32746379-32746836,32747898-32748273,32748367-32748640,
32750605-32750789
Length = 430
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 154 DRCTGGSSAAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGF 327
D G AAA Y+L L+ CE+ K + ++++ + A + A +L C F
Sbjct: 306 DTLAGKLLAAADRYELPRLRLLCESYLCKHISVNSVATTLALADRHHAMELKSVCLKF 363
>02_03_0120 + 15463163-15465250
Length = 695
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 5 LAPPRTSNESMPPASTAPPLVQINDIRYHIFEQVMKYLYSG 127
L PP + + S PP S PP N R H+F +V+ + G
Sbjct: 300 LPPPPSPSPSPPPPSPPPP-PHPNHRRRHLFYKVLGGVLGG 339
>12_02_0098 +
13592581-13593120,13595729-13596668,13596879-13597502,
13604810-13604946,13604994-13605035
Length = 760
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 160 ICLRYI*TGAPSRVKVFHYLLKNMISYVVNLYKRGSCARRW 38
I LR + +P + VF KN++++V+ Y R+W
Sbjct: 145 IQLRRVLAFSPRNIAVFLEQQKNVVAFVIRTYTCSKMDRQW 185
>11_06_0415 + 23306555-23306794,23306842-23307684
Length = 360
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AAA Y + L+ CE + + VD + A+ +G +L E C F+
Sbjct: 280 AAADRYDIERLKLICEDKLSGGVDATTAATTLALAEQHGCCRLKEACLRFM 330
>10_08_0066 + 14610220-14610798,14610928-14611287
Length = 312
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA Y L ++ CE + +K +D ++ ++ A+ + L E C FL
Sbjct: 227 AADRYNLERMKLICEDKLSKHIDAGSVANILALAEQHSCHTLKEACLEFL 276
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 184 ASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLE 312
A Y++ L+ +CE V N ++ Y A + A QLLE
Sbjct: 147 AEKYEVKNLKAYCEKFLTSKVSNDNAITHYAFAHRHSAKQLLE 189
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = -3
Query: 187 KPLPTNLQYICLRY---I*TGAPSRVKVFHYLLKNM 89
+PLPT ++ L+ + TGAP+RVK F ++N+
Sbjct: 170 RPLPTEQEFEVLKNAPRLETGAPARVKPFGVEVRNV 205
>01_01_0325 +
2631637-2631882,2632715-2632788,2632874-2633006,
2633091-2633172,2633471-2633580,2633659-2633751,
2633854-2633904,2634013-2634105,2635257-2636129,
2636204-2636316,2636436-2636448
Length = 626
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 103 LLKNMISYVVNLYKRGSCARRWH*LVR 23
++++M+S++VNL+ G C R L+R
Sbjct: 383 IIRSMLSHLVNLFSLGKCLRMGTDLLR 409
>11_01_0069 - 557951-558412,558508-558684,559359-559523
Length = 267
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLLQ 336
A Y + L+R CEAR A V+ N++ A++ + L E G +++
Sbjct: 176 AGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALKERAMGTVVE 227
>10_01_0233 + 2471628-2471898,2474289-2475101,2475468-2475655
Length = 423
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 56 PPLVQINDIRYHIFEQVMKYLYSGGCASLDIPETDVLEVRRQRLPSTSCYH 208
P +++I Y +F + ++ GCA D P T + ++ + S C H
Sbjct: 107 PNVIKIERKCYKVFHRYLQLAIVEGCAPEDTPRT-MCQINSIHVNSIICMH 156
>08_02_1310 - 26037025-26038074
Length = 349
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AAA Y+L L+ + +V N+ + + A+ YG +L + C +L
Sbjct: 263 AAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYL 313
>08_01_1061 -
10804269-10804352,10804464-10804593,10804696-10804745,
10805154-10805216,10806235-10806375,10806541-10806925,
10807735-10808339
Length = 485
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 14 PRTSNESMPPASTAPPL 64
P +S E+ PP S APPL
Sbjct: 179 PSSSREAPPPTSQAPPL 195
>04_04_1219 + 31835854-31836105,31836481-31837152
Length = 307
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
AA Y + L+ C + KSV + +V A+ + QL + C GF+
Sbjct: 222 AADRYGVDRLRAMCGVKLYKSVSVGTVVDSLEFAEKHHCAQLKDACLGFM 271
>02_05_1032 + 33637108-33638421
Length = 437
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 184 ASFYQLLPLQR--HCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQ 321
A + ++P H A+A + N S Y+H+ + G LLE C+
Sbjct: 164 AKLFDVVPFTHVLHLAAQAGVRYAMENPAS-YVHSNIAGLVTLLEACK 210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,944,375
Number of Sequences: 37544
Number of extensions: 217107
Number of successful extensions: 725
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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