SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_J13
         (336 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1308 - 26024491-26025405                                         34   0.033
10_08_0102 + 14810293-14811345,14811989-14812108,14812745-148127...    31   0.18 
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254...    31   0.31 
04_04_1221 + 31845938-31847038                                         31   0.31 
10_08_0068 + 14624376-14624975,14625113-14625601                       30   0.53 
10_08_0065 + 14596257-14597417                                         29   0.71 
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130...    29   0.71 
11_04_0095 + 13429895-13431019                                         29   1.2  
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409...    28   1.6  
07_01_0117 + 894314-896677                                             28   2.2  
04_03_0991 - 21500143-21500799,21500834-21501172                       28   2.2  
02_02_0618 - 12190727-12191698                                         28   2.2  
12_01_0252 + 1868670-1869200,1870167-1871120                           27   2.9  
11_01_0252 + 1934505-1935032,1936001-1936957                           27   2.9  
10_08_0055 - 14505747-14506934                                         27   2.9  
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202     27   2.9  
11_04_0224 + 15059904-15059910,15059955-15060185,15060345-150604...    27   3.8  
08_02_1251 - 25592537-25593380,25593589-25593893                       27   3.8  
08_02_0580 - 18953208-18953513,18953668-18953868,18953929-189540...    27   3.8  
08_01_0177 + 1504472-1505033,1505035-1506647                           27   3.8  
03_06_0266 + 32746379-32746836,32747898-32748273,32748367-327486...    27   3.8  
02_03_0120 + 15463163-15465250                                         27   3.8  
12_02_0098 + 13592581-13593120,13595729-13596668,13596879-135975...    27   5.0  
11_06_0415 + 23306555-23306794,23306842-23307684                       27   5.0  
10_08_0066 + 14610220-14610798,14610928-14611287                       27   5.0  
07_01_1036 + 9021395-9021658,9024214-9024690                           27   5.0  
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756...    27   5.0  
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263...    27   5.0  
11_01_0069 - 557951-558412,558508-558684,559359-559523                 26   6.6  
10_01_0233 + 2471628-2471898,2474289-2475101,2475468-2475655           26   6.6  
08_02_1310 - 26037025-26038074                                         26   6.6  
08_01_1061 - 10804269-10804352,10804464-10804593,10804696-108047...    26   8.7  
04_04_1219 + 31835854-31836105,31836481-31837152                       26   8.7  
02_05_1032 + 33637108-33638421                                         26   8.7  

>08_02_1308 - 26024491-26025405
          Length = 304

 Score = 33.9 bits (74), Expect = 0.033
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLLQ 336
           AAA  Y L  L+  C  +  ++V +  + +  IHA+++G  +L   C  F +Q
Sbjct: 216 AAADRYDLSRLKLMCAQKLWEAVSVDTVATTLIHAEMHGCPELKSSCLDFFVQ 268


>10_08_0102 +
           14810293-14811345,14811989-14812108,14812745-14812792,
           14812886-14813006,14814073-14814129,14815109-14815217,
           14815298-14815523,14815608-14815724,14816041-14816119,
           14816303-14816325,14816698-14816742,14816872-14817030
          Length = 718

 Score = 31.5 bits (68), Expect = 0.18
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AAA  Y +  L+  CEA+  K +++ ++ S+ I A  +G + L   C  FL
Sbjct: 270 AAADRYGMERLRLLCEAQLCKHIEVASVASILILADQHGCSGLKNACFEFL 320


>05_04_0228 -
           19224901-19224991,19225095-19225219,19225293-19225410,
           19225554-19225618,19225760-19225839,19225942-19226005,
           19227341-19227480,19227571-19227694,19227781-19227840,
           19227922-19227990,19228139-19228288,19229182-19229289,
           19229573-19229648,19229960-19230054,19231729-19231803,
           19231923-19232043,19232136-19232308,19232647-19232813,
           19232944-19233301
          Length = 752

 Score = 30.7 bits (66), Expect = 0.31
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLLQ 336
           AA  Y L  L+R CE   A+ V++ N+  +Y  ++ + A  L   C  F+L+
Sbjct: 662 AADQYLLEGLKRLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILE 713



 Score = 29.1 bits (62), Expect = 0.93
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 65  VQINDIRYHIFEQVMKYLYSGGCASLDIPETDVLEVRRQRL 187
           ++I +IR+++FE +M+++Y+G          D+L    Q L
Sbjct: 627 IEIPNIRWNVFELMMRFIYTGSVEVTSDISQDLLRAADQYL 667


>04_04_1221 + 31845938-31847038
          Length = 366

 Score = 30.7 bits (66), Expect = 0.31
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA  Y +  L+  CE R ++++D+  + +  + A+ +  +QL + C GF+
Sbjct: 275 AADRYGVDRLRLICERRLSETIDVETVATTLVLAEQHHCSQLRQACIGFV 324


>10_08_0068 + 14624376-14624975,14625113-14625601
          Length = 362

 Score = 29.9 bits (64), Expect = 0.53
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA  Y L  ++  CE   +K +D  ++V++ + A+ +    L E C  FL
Sbjct: 277 AADRYNLERMKLICEHNLSKHIDTDSVVNILVLAEQHSCHMLKEACLKFL 326


>10_08_0065 + 14596257-14597417
          Length = 386

 Score = 29.5 bits (63), Expect = 0.71
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA  Y L  L+  CE + +K++D  ++ ++ + A+ +    L E C  FL
Sbjct: 273 AADRYNLERLKLICEDKLSKNIDTGSIANILLLAEKHSCHALKEACFEFL 322


>05_01_0184 -
           1298640-1298751,1298936-1299027,1299695-1299910,
           1300045-1300614
          Length = 329

 Score = 29.5 bits (63), Expect = 0.71
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   MLAPPRTSNESMPPASTAPPLVQINDIRYHIFEQVMKYLYSGGCASLDIPETDVL--EVR 175
           ++ P    +E +P  +       ++D     +E+  KYL   G   LD+ E   L  E+ 
Sbjct: 207 LMRPWCNEDEQVPQLTPFKISHGVSDTMMKQYEEDYKYLVEEG---LDLEEMKKLYHELM 263

Query: 176 RQRLPSTSCYHFKDTVKRERPNLSTYITLSL 268
           R+      C H K+TV+ ER     Y + ++
Sbjct: 264 RKYQQIIHCSHSKETVRLERVTYKQYSSCNI 294


>11_04_0095 + 13429895-13431019
          Length = 374

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AAA+ Y +  LQ  CE    +S+ +  + S  + A+ +G   L   C  FL
Sbjct: 288 AAAARYGMERLQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFL 338


>03_06_0642 +
           35239658-35240083,35240167-35240238,35240305-35240919,
           35241253-35241435,35241604-35241663,35241733-35241936,
           35242497-35242745,35243609-35243707,35243760-35243858,
           35244463-35244480,35244668-35244862,35244981-35245073,
           35245265-35245531,35245884-35246102
          Length = 932

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 5   LAPPRTSNESMPPASTAPPLVQINDIRY 88
           L PP    +  PP +T PP  +  D RY
Sbjct: 66  LPPPEQQKQQQPPPTTPPPAPRRRDPRY 93


>07_01_0117 + 894314-896677
          Length = 787

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
 Frame = +2

Query: 14  PRTSNESMPPASTAPPLVQINDIRYHIFEQVMKYLYSGGCASLDIPET--DVLEVRRQRL 187
           PR +++S+  +S +  L + N ++     Q     Y GG AS  IPE+  +   +     
Sbjct: 572 PRPNHDSVVLSSGSTSLAK-NGLQDKFIRQYASTSYHGGSASTIIPESKGNQASIILTWH 630

Query: 188 PSTSCYHFKDTVKRERPNLSTYITLSLFIFMLRFTVLHNY 307
            +T CY  KD  +R++   +T   L    + +  T L  Y
Sbjct: 631 AATGCYD-KDYEQRKKMKATTESPLQHRQYRVVATALSKY 669


>04_03_0991 - 21500143-21500799,21500834-21501172
          Length = 331

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AAAS Y++  L+  CE +  + V+   +VS+   A+ +    L E C  FL
Sbjct: 268 AAASRYKMERLRLVCEHKLCEYVNGRTVVSMLAFAREHHCDGLKEKCLRFL 318


>02_02_0618 - 12190727-12191698
          Length = 323

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA +Y +  L+  CE + AK +D + + +    A+ +    L E C  FL
Sbjct: 268 AADWYNVGRLKLICEEKLAKHIDCNMVATTLALAEQHSCQGLKEACLEFL 317


>12_01_0252 + 1868670-1869200,1870167-1871120
          Length = 494

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 44  ASTAPPLV-QINDIRYHIFEQVMKYLYSGGCASLDIPETDVL 166
           A   P LV  ++ IRY +   V+++LYSG  AS+  P++  L
Sbjct: 97  APATPELVIPVSSIRYEVLVLVLQFLYSGQ-ASVAAPKSGPL 137


>11_01_0252 + 1934505-1935032,1936001-1936957
          Length = 494

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 44  ASTAPPLV-QINDIRYHIFEQVMKYLYSGGCASLDIPETDVL 166
           A   P LV  ++ IRY +   V+++LYSG  AS+  P++  L
Sbjct: 96  APATPELVIPVSSIRYEVLVLVLQFLYSGQ-ASVAAPKSGPL 136


>10_08_0055 - 14505747-14506934
          Length = 395

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA  Y L  L+  CE R  K +D  ++ ++   A+ +    L E C  FL
Sbjct: 299 AADRYNLERLKLICEDRLCKHIDGESVATILALAEQHSCDGLKEACFQFL 348


>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
          Length = 580

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 187 SFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVY 291
           +F  L  L+ H + R  KS+ +H+LV  Y HA+ Y
Sbjct: 273 TFRNLKHLKDHIK-RPLKSLHIHSLVDAYEHARNY 306


>11_04_0224 +
           15059904-15059910,15059955-15060185,15060345-15060424,
           15060497-15060547,15060548-15060670,15062151-15062184,
           15062363-15062441,15062779-15062848,15075787-15075889,
           15076247-15076284,15076449-15076550,15077027-15077107,
           15077506-15077657,15077731-15077857,15078193-15078311,
           15078636-15078749,15079001-15079214
          Length = 574

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 166 QYICLRYI*TGAPSRVKVFHYLLKN 92
           QY C RY+     + V++F+Y +K+
Sbjct: 26  QYYCCRYVEVNESTSVRLFYYFVKS 50


>08_02_1251 - 25592537-25593380,25593589-25593893
          Length = 382

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLL 333
           AAA  Y+L  L+  C  +  +S+ +  +     +AK+ G ++L   C   LL
Sbjct: 312 AAAHEYKLDRLKLMCARKLEESLSVETVARTLGYAKMCGCSELKSKCLDLLL 363


>08_02_0580 -
           18953208-18953513,18953668-18953868,18953929-18954009,
           18954096-18954410,18954493-18954636,18954733-18954822,
           18954907-18954983,18955122-18955182,18955264-18955490,
           18955581-18955740,18955825-18956025,18956114-18956209,
           18956380-18956565,18956641-18956810,18957044-18957275,
           18958652-18959029
          Length = 974

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 38  PPASTAPPLVQINDIRYHIFEQVMKYLYSGGCASLDIPETDVLEVRRQRLP 190
           P A  APP+    D +Y + E    +L+SGG  +       ++E  R+  P
Sbjct: 69  PAALVAPPIPPCED-KYFVREPCYDFLWSGGGGAGSARVAGIVEAIRRNNP 118


>08_01_0177 + 1504472-1505033,1505035-1506647
          Length = 724

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 166 GGSSAAASFYQLLPLQRHCEARA-AKSVDLHNLVSVYIHAK 285
           GG  AAA+  +L+ ++ HCE  A A+S    N  +V +H K
Sbjct: 236 GGGEAAANDGELVVIKTHCEFPAIARSTPRDNF-AVLLHVK 275


>03_06_0266 +
           32746379-32746836,32747898-32748273,32748367-32748640,
           32750605-32750789
          Length = 430

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 154 DRCTGGSSAAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGF 327
           D   G   AAA  Y+L  L+  CE+   K + ++++ +    A  + A +L   C  F
Sbjct: 306 DTLAGKLLAAADRYELPRLRLLCESYLCKHISVNSVATTLALADRHHAMELKSVCLKF 363


>02_03_0120 + 15463163-15465250
          Length = 695

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 5   LAPPRTSNESMPPASTAPPLVQINDIRYHIFEQVMKYLYSG 127
           L PP + + S PP S  PP    N  R H+F +V+  +  G
Sbjct: 300 LPPPPSPSPSPPPPSPPPP-PHPNHRRRHLFYKVLGGVLGG 339


>12_02_0098 +
           13592581-13593120,13595729-13596668,13596879-13597502,
           13604810-13604946,13604994-13605035
          Length = 760

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -3

Query: 160 ICLRYI*TGAPSRVKVFHYLLKNMISYVVNLYKRGSCARRW 38
           I LR +   +P  + VF    KN++++V+  Y      R+W
Sbjct: 145 IQLRRVLAFSPRNIAVFLEQQKNVVAFVIRTYTCSKMDRQW 185


>11_06_0415 + 23306555-23306794,23306842-23307684
          Length = 360

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AAA  Y +  L+  CE + +  VD     +    A+ +G  +L E C  F+
Sbjct: 280 AAADRYDIERLKLICEDKLSGGVDATTAATTLALAEQHGCCRLKEACLRFM 330


>10_08_0066 + 14610220-14610798,14610928-14611287
          Length = 312

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA  Y L  ++  CE + +K +D  ++ ++   A+ +    L E C  FL
Sbjct: 227 AADRYNLERMKLICEDKLSKHIDAGSVANILALAEQHSCHTLKEACLEFL 276


>07_01_1036 + 9021395-9021658,9024214-9024690
          Length = 246

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 184 ASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLE 312
           A  Y++  L+ +CE      V   N ++ Y  A  + A QLLE
Sbjct: 147 AEKYEVKNLKAYCEKFLTSKVSNDNAITHYAFAHRHSAKQLLE 189


>06_03_1344 -
           29472139-29473292,29474478-29475386,29475504-29475618,
           29476017-29476218,29477177-29477296,29477431-29477582,
           29478177-29478461
          Length = 978

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = -3

Query: 187 KPLPTNLQYICLRY---I*TGAPSRVKVFHYLLKNM 89
           +PLPT  ++  L+    + TGAP+RVK F   ++N+
Sbjct: 170 RPLPTEQEFEVLKNAPRLETGAPARVKPFGVEVRNV 205


>01_01_0325 +
           2631637-2631882,2632715-2632788,2632874-2633006,
           2633091-2633172,2633471-2633580,2633659-2633751,
           2633854-2633904,2634013-2634105,2635257-2636129,
           2636204-2636316,2636436-2636448
          Length = 626

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -3

Query: 103 LLKNMISYVVNLYKRGSCARRWH*LVR 23
           ++++M+S++VNL+  G C R    L+R
Sbjct: 383 IIRSMLSHLVNLFSLGKCLRMGTDLLR 409


>11_01_0069 - 557951-558412,558508-558684,559359-559523
          Length = 267

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFLLQ 336
           A   Y +  L+R CEAR A  V+  N++     A++  +  L E   G +++
Sbjct: 176 AGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALKERAMGTVVE 227


>10_01_0233 + 2471628-2471898,2474289-2475101,2475468-2475655
          Length = 423

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +2

Query: 56  PPLVQINDIRYHIFEQVMKYLYSGGCASLDIPETDVLEVRRQRLPSTSCYH 208
           P +++I    Y +F + ++     GCA  D P T + ++    + S  C H
Sbjct: 107 PNVIKIERKCYKVFHRYLQLAIVEGCAPEDTPRT-MCQINSIHVNSIICMH 156


>08_02_1310 - 26037025-26038074
          Length = 349

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 178 AAASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AAA  Y+L  L+     +   +V   N+  + + A+ YG  +L + C  +L
Sbjct: 263 AAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYL 313


>08_01_1061 -
           10804269-10804352,10804464-10804593,10804696-10804745,
           10805154-10805216,10806235-10806375,10806541-10806925,
           10807735-10808339
          Length = 485

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 14  PRTSNESMPPASTAPPL 64
           P +S E+ PP S APPL
Sbjct: 179 PSSSREAPPPTSQAPPL 195


>04_04_1219 + 31835854-31836105,31836481-31837152
          Length = 307

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 181 AASFYQLLPLQRHCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQGFL 330
           AA  Y +  L+  C  +  KSV +  +V     A+ +   QL + C GF+
Sbjct: 222 AADRYGVDRLRAMCGVKLYKSVSVGTVVDSLEFAEKHHCAQLKDACLGFM 271


>02_05_1032 + 33637108-33638421
          Length = 437

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 184 ASFYQLLPLQR--HCEARAAKSVDLHNLVSVYIHAKVYGATQLLEYCQ 321
           A  + ++P     H  A+A     + N  S Y+H+ + G   LLE C+
Sbjct: 164 AKLFDVVPFTHVLHLAAQAGVRYAMENPAS-YVHSNIAGLVTLLEACK 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,944,375
Number of Sequences: 37544
Number of extensions: 217107
Number of successful extensions: 725
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -