Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_J07
         (217 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   2.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   5.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   5.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          19   5.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   8.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   8.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   8.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   8.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   8.8  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 67   PIVYKESLLKYTL 105
            P+VYK ++  YTL
Sbjct: 1218 PLVYKRNINTYTL 1230


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 15  LLRIEKKTSLLITRV*IPN 71
           LL  + KTS L+ +V IP+
Sbjct: 160 LLTFDLKTSKLVKQVEIPH 178


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 76  YKESLLKYTLTLKKNF 123
           YKE+L KYT T + NF
Sbjct: 431 YKENLPKYT-TEELNF 445


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 76  YKESLLKYTLTLKKNF 123
           YKE+L KYT T + NF
Sbjct: 431 YKENLPKYT-TEELNF 445


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 76  YKESLLKYTLTLKKNF 123
           YKE+L KYT T + NF
Sbjct: 57  YKENLPKYT-TEELNF 71


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 94  LKEIPYTQLGIY 59
           +K IP T+ G+Y
Sbjct: 158 VKSIPVTKKGVY 169


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 129 IL*KDDASETLQVNK 173
           +L KD+A + + VNK
Sbjct: 680 LLFKDEAKDLVSVNK 694


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 129 IL*KDDASETLQVNK 173
           +L KD+A + + VNK
Sbjct: 680 LLFKDEAKDLVSVNK 694


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = -1

Query: 94  LKEIPYTQLGIYTLVISRLVFFSILNNTLV 5
           +++I  TQ     +  + ++FF ++NN+ +
Sbjct: 299 IQDIFNTQSSAKVMSKNGVLFFGLVNNSAI 328


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 129 IL*KDDASETLQVNK 173
           +L KD+A + + VNK
Sbjct: 680 LLFKDEAKDLVSVNK 694


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,934
Number of Sequences: 438
Number of extensions: 514
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)