Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_J06
(309 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191 73 5e-14
03_05_0610 - 26108546-26108671,26108739-26108789,26109410-261095... 71 1e-13
11_01_0223 + 1746203-1746228,1746344-1746463,1746942-1747062,174... 29 0.56
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 29 0.98
05_01_0040 - 273384-273437,273920-274102,274465-274677,275479-27... 28 1.3
03_02_0640 - 10058828-10058971,10059066-10059201,10059512-100595... 28 1.3
01_06_1035 + 33964570-33964758,33965664-33965759,33965855-339659... 28 1.3
11_02_0062 - 7909343-7909413,7909509-7910974,7911064-7912088,791... 28 1.7
05_07_0144 - 28007477-28008412 28 1.7
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 27 2.3
03_06_0580 - 34877496-34877723 27 2.3
10_01_0236 + 2486371-2486952 27 3.0
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 27 3.0
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 27 3.0
01_06_1554 + 38217297-38217539,38217783-38218352,38218439-38219008 27 4.0
01_06_0608 + 30575897-30576142,30576252-30576755 27 4.0
01_06_0022 + 25675400-25676146 27 4.0
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 26 5.2
06_03_0880 + 25620487-25620852,25620950-25621041,25621316-256217... 26 5.2
04_03_0052 + 10257109-10257337,10257580-10257668,10257708-102582... 26 5.2
11_06_0129 - 20397179-20397537,20397749-20400497 26 6.9
09_06_0196 - 21481662-21481720,21481898-21483245 26 6.9
09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148 26 6.9
02_01_0396 + 2874932-2875240,2875401-2875532,2875678-2875941 26 6.9
10_05_0097 + 9145478-9145777,9146590-9146785,9146949-9147193 25 9.2
08_02_0934 + 22747742-22748644 25 9.2
06_02_0322 + 14369221-14369540,14370240-14370918,14371347-143715... 25 9.2
06_01_0575 + 4062084-4063135,4063518-4063620 25 9.2
05_02_0022 + 5682045-5682301,5682477-5682720 25 9.2
02_02_0728 + 13416481-13416889,13416979-13417065,13417220-134173... 25 9.2
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 25 9.2
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 25 9.2
>03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191
Length = 82
Score = 72.9 bits (171), Expect = 5e-14
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = +2
Query: 23 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGAIR 202
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 203 LMGESDDCIVRLTKK 247
G++D + RL +K
Sbjct: 60 AQGDADSALDRLWQK 74
>03_05_0610 -
26108546-26108671,26108739-26108789,26109410-26109542,
26109633-26109682
Length = 119
Score = 71.3 bits (167), Expect = 1e-13
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2
Query: 23 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGAIR 202
MQN+ G+ VDLY PRKCS +NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSTTNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 203 LMGESDDCIVRLTKK 247
G++D + RL +K
Sbjct: 60 AQGDADSALDRLWQK 74
>11_01_0223 +
1746203-1746228,1746344-1746463,1746942-1747062,
1747441-1747572,1748266-1748375,1748465-1748648,
1749153-1749305,1749672-1749818
Length = 330
Score = 29.5 bits (63), Expect = 0.56
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 113 MRGPSHGSDDYSPSISLGSTSQRIHQRRSAFCV 15
MR P+ G D P + LG HQ+ SA C+
Sbjct: 262 MREPAGGDDVSRPMLFLGEVMSHEHQKGSASCI 294
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 28.7 bits (61), Expect = 0.98
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 185 PRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPS 72
PR QH L PRP+S++APM S + SPS
Sbjct: 69 PRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSPS 106
>05_01_0040 -
273384-273437,273920-274102,274465-274677,275479-276294,
276431-276823,277233-277238
Length = 554
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -2
Query: 206 SSEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRRS 27
S W +R + S Q RPLS +G S+G+ +IS G +++++ S
Sbjct: 211 SHHWHYRDKIPLHSGQWCHDAEARPLSNY--QQGASYGNGRLRDNISRGGRNEQVNIISS 268
Query: 26 AFCVSKPR 3
++KPR
Sbjct: 269 RRTMTKPR 276
>03_02_0640 -
10058828-10058971,10059066-10059201,10059512-10059590,
10060861-10060927,10061014-10061100,10061474-10061567,
10061663-10061749,10062267-10062328,10062485-10062584,
10062729-10062827,10062969-10063033,10063617-10063694,
10063787-10063873,10064383-10064466,10064860-10064955,
10065045-10065122,10066049-10066139,10066224-10066315,
10066433-10066560,10067421-10067495,10067670-10067850
Length = 669
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 41 EFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADSSKMYVVCGAIRLMGES 217
EF D Y R ++ + S++ + A+ + A G SK+Y V G IRL+ S
Sbjct: 30 EFRDRYVIRSVDGGGAFAVSRSNGSLRPLSAE-EAAAGSDCRVSKIYGVAGVIRLLAGS 87
>01_06_1035 +
33964570-33964758,33965664-33965759,33965855-33965923,
33966644-33966748,33966852-33966908,33967065-33967265,
33967915-33968007,33968070-33968169,33968322-33968421,
33968869-33968954,33969294-33969403
Length = 401
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 158 HVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQR 45
H+ Q PL+RA P H SPS+ LGS + R
Sbjct: 6 HLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSR 43
>11_02_0062 -
7909343-7909413,7909509-7910974,7911064-7912088,
7912300-7912809,7913418-7913441,7913617-7913673
Length = 1050
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -2
Query: 218 RTLPSSEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSP 75
R+LP+S L P +S + +RL G + S +AP GP+ G++ +P
Sbjct: 132 RSLPASALLP-PYSSASTPLLIRLPGGQADSTSAPSLGPAVGNEPTTP 178
>05_07_0144 - 28007477-28008412
Length = 311
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 252 PSFL-VSLTMQSSDSPIKRMAPQTTYILEESAARPVAGSTSA 130
P FL +S + S ++APQTT I ++A V STSA
Sbjct: 35 PGFLSLSPSSVSPGDAAAQLAPQTTTITTSNSAAAVGNSTSA 76
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 212 LPSSEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGP 102
L + E L++ SW Q+ RL+ P PL+ P + P
Sbjct: 228 LATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPP 264
>03_06_0580 - 34877496-34877723
Length = 75
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 206 SSEWLHRPRTSWRSQQHVRLQGPRPLSR---AAPMRGPSHGSDD 84
S W H + + R + R G +R +A RGPSHG DD
Sbjct: 11 SGSWAHEVKQALRDKLR-RAYGTAGAARPAASAVSRGPSHGGDD 53
>10_01_0236 + 2486371-2486952
Length = 193
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -2
Query: 194 LHRPRTSWRSQQHVRL-QGPRPLSRAAPMRGP---SHGSDDYSPSISLGSTSQRIH 39
+ +PRT + R Q RPL RAAP+ P + DD ++ G +H
Sbjct: 108 IKKPRTPRSGEGQARAPQRRRPLERAAPLPPPAAVAEALDDLEREVTRGFVEDLLH 163
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 172 GGVSSTSGCRVHVRYH-ELHRCVVLRMDQTIT---RRAFPWAVQVNEFTSVVL 26
GG SS+S V +H +H R ++ RRA PWA +E T VVL
Sbjct: 103 GGSSSSSTATARVPFHLPIHPPPPEREEEEEKKGIRRAVPWAAARDEETKVVL 155
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 189 QTTYILEESAARPVAGSTSAIT 124
Q T ILEE+ +P+ STSAIT
Sbjct: 510 QITNILEENVVQPLLVSTSAIT 531
>01_06_1554 + 38217297-38217539,38217783-38218352,38218439-38219008
Length = 460
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -2
Query: 209 PSSEWLHRPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDYSPSISLGSTSQRIHQRR 30
P E H P+T WR H + G +S + PS S ++ + + +RR
Sbjct: 62 PKMETSHEPQTPWRLAVHPAVVGTVRVSGCGAVVAPSRRQCRVSAAVLTAAETATATRRR 121
>01_06_0608 + 30575897-30576142,30576252-30576755
Length = 249
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 43 IR*LVLPKEML---GE*SSDPCEGPRIGAARDSGRG 141
+R ++ KE L G SDPC+ RIGA D+GRG
Sbjct: 186 LRAMLAKKEELAAAGNNGSDPCKRRRIGA--DTGRG 219
>01_06_0022 + 25675400-25676146
Length = 248
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 250 VFLSEPDYAVVGLSHQANGSTDHVHLGGVSSTSGC 146
+FL E + VG + ++ STD L GVS S C
Sbjct: 82 LFLEEGRTSSVGSTSSSSSSTDIAELDGVSPDSYC 116
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 76 GE*SSDPCEGPRIGAARDSGRGP-CNRT 156
G+ SS C G +RD+ GP CNRT
Sbjct: 89 GDLSSSDCAGCGTNVSRDAVAGPTCNRT 116
>06_03_0880 +
25620487-25620852,25620950-25621041,25621316-25621789,
25622079-25623039
Length = 630
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -1
Query: 255 IPSFLVSLTMQSSDSPIKRMAPQTTYILEESAARPVAGSTSAITSCTDAWSFAW 94
IPS L L++ + D I+R+ Y+ E + G I+ TD+W FAW
Sbjct: 195 IPSLLFGLSLPNPDL-IQRLGTPN-YMAPEQWQPSIRGP---ISYETDSWGFAW 243
>04_03_0052 +
10257109-10257337,10257580-10257668,10257708-10258289,
10258477-10258668,10259392-10259563,10260190-10260461,
10260682-10260801,10260912-10260968,10261631-10261831,
10262451-10262511,10262712-10263013
Length = 758
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 230 LCSRRTLPSSEWLHRPRTSWRSQQHVRLQGPRPLSRA 120
L SRR+LPS E ++ TS + HV+ GP +RA
Sbjct: 598 LASRRSLPSDEDINTIDTS--TSPHVQHDGPITRARA 632
>11_06_0129 - 20397179-20397537,20397749-20400497
Length = 1035
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 147 AGSTSAITSCTDAWSFAWIRRLLAEHFLGQYKSTNSPASFC 25
AGS+S+ + D + + +L+ LG S NS + FC
Sbjct: 20 AGSSSSSNATADELALLSFKSMLSSPSLGLMASWNSSSHFC 60
>09_06_0196 - 21481662-21481720,21481898-21483245
Length = 468
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 128 SRAAPMRGPSHGSDDYSPSISLGSTS 51
+R P++ HGS +PS++L ++S
Sbjct: 80 NRGTPVKDGGHGSSSSAPSLTLSNSS 105
>09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148
Length = 416
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 173 WRSQQHVRLQGPRPLSRAAPMRGPSHG 93
W+ H+RL RP S AAP+ P G
Sbjct: 20 WQLFNHIRLFALRPSSYAAPVWFPVRG 46
>02_01_0396 + 2874932-2875240,2875401-2875532,2875678-2875941
Length = 234
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -1
Query: 249 SFLVSLTMQSSDSPIKRMAPQTTYILEESAARPVAGSTSAITSCTDAWSFAWIRRLLAEH 70
SF+ + S + P K + Q + AR A S T C W+ RR A
Sbjct: 58 SFVAGAVVASPEQPAKLVRDQRRVVPGSCRARRGAASNGFRTYCMQTWNPFTNRRYEAMS 117
Query: 69 FL 64
+L
Sbjct: 118 YL 119
>10_05_0097 + 9145478-9145777,9146590-9146785,9146949-9147193
Length = 246
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -2
Query: 188 RPRTSWRSQQHVRLQGPRPLSRAAPMRGPSHGSDDY 81
R TS R Q R P P R+ R S G DDY
Sbjct: 7 RRSTSSRPSQRRRQCSPGPSRRSVDARQLSPGMDDY 42
>08_02_0934 + 22747742-22748644
Length = 300
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 95 GSDDYSPSISLGSTSQRIHQRRS 27
GS +SPS S S+S H+RR+
Sbjct: 264 GSTSFSPSTSSSSSSASPHERRA 286
>06_02_0322 +
14369221-14369540,14370240-14370918,14371347-14371573,
14372121-14372312,14372394-14372550,14373860-14374093
Length = 602
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 53 LYCPRKCSASNRLIHAKDHASVQLVIADVDPA 148
+ C R +ASN K HAS ++DVD A
Sbjct: 158 ILCVRSGTASNPADSGKVHASHGFYVSDVDAA 189
>06_01_0575 + 4062084-4063135,4063518-4063620
Length = 384
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 110 RGPSHGSDDYSPSISLGSTS 51
RGP D SP++S+ STS
Sbjct: 291 RGPFRSGSDSSPAVSVASTS 310
>05_02_0022 + 5682045-5682301,5682477-5682720
Length = 166
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 280 RTSVVLSQYPVFLSEPDYA 224
RTS V + P+FLS PD A
Sbjct: 107 RTSTVAPRLPIFLSLPDLA 125
>02_02_0728 +
13416481-13416889,13416979-13417065,13417220-13417351,
13417474-13417539,13417754-13418919
Length = 619
Score = 25.4 bits (53), Expect = 9.2
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -3
Query: 265 LSQYPVFLSEPDYAVVGLSHQANGSTDHVHLGGVSSTSGCRVHVRYHELHRCVVLRMDQT 86
L++ E Y VV +AN S+D H G V ++ + V L CV L + T
Sbjct: 466 LNEIVAMAEEIGYEVV--VEEANVSSDLSHFGKVVNSVDVMMGVHGAGLTNCVFLPQNAT 523
Query: 85 ITRRAFPW 62
+ + PW
Sbjct: 524 LI-QIVPW 530
>02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 243 LVSLTMQSSDSPIKRMAPQTTYILEESAARPVAGSTSAITSCTDAWSFAWIRRLLAEHFL 64
++ L QS D P K Q+ + A G++ ++ +CT A F + RL+AEH +
Sbjct: 878 ILRLFEQSQDGPRKESIRQSWF------AGLGLGTSMSLMTCTWALDFWYGGRLMAEHHI 931
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 188 RPRTSWRSQQHVRLQGPRPLSRAAPMRGPSH 96
R T W+ Q++ + +P + A RGP H
Sbjct: 419 RKNTPWQKAQNLNPKKEQPTTTALQKRGPLH 449
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,094,456
Number of Sequences: 37544
Number of extensions: 185419
Number of successful extensions: 725
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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