Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_J05
(329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 58 1e-09
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 57 4e-09
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 57 4e-09
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 56 9e-09
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 54 3e-08
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 54 3e-08
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 53 5e-08
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 52 1e-07
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 51 3e-07
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 50 4e-07
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 46 5e-06
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 46 7e-06
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 46 1e-05
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 43 7e-05
09_04_0714 - 19685374-19685430,19685606-19685669,19686117-196862... 41 2e-04
01_06_0704 + 31336622-31336825,31336948-31337009,31337040-313371... 38 0.002
05_05_0167 - 22868506-22868580,22868693-22869103 32 0.095
02_02_0590 - 11894721-11895188,11895684-11895851 29 1.2
04_03_0121 + 11506644-11508107 28 1.5
12_02_0741 - 22690452-22690528,22690693-22690813,22690871-226909... 26 6.2
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 26 6.2
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 26 6.2
10_08_0943 + 21728294-21728675,21728767-21728840,21729469-217304... 26 8.3
09_06_0041 - 20440266-20441381 26 8.3
08_01_0972 - 9789453-9790364,9790383-9790861,9791071-9792238 26 8.3
01_03_0184 + 13560830-13562981,13563604-13564088 26 8.3
01_01_0555 + 4080316-4081680 26 8.3
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 58.4 bits (135), Expect = 1e-09
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 159 EVNEGNELTPTQVNDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWLVANV 329
EV G EL P+ V D P V+ + FYTL M DPDAPS +DP RE+ HWLV ++
Sbjct: 37 EVANGCELRPSAVADQPRVAVGGPDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDI 94
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 56.8 bits (131), Expect = 4e-09
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 159 EVNEGNELTPTQVNDIPSVSWEAASD--QFYTLAMTDPDAPSRADPKFREWHHWLVANV 329
E+ G+EL P+QV P+V D YTL M DPDAPS ++P RE+ HWLV +V
Sbjct: 35 EMTSGSELRPSQVAGEPAVQITGGRDGRALYTLVMVDPDAPSPSNPSKREYLHWLVTDV 93
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 56.8 bits (131), Expect = 4e-09
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +3
Query: 159 EVNEGNELTPTQVNDIPSVSWEAASDQFYTLAMTDPDAPSRADPKFREWHHWLVANV 329
++ G E+ P+ P+V ++ + L MTDPDAPS ++P REW HWLV N+
Sbjct: 35 DLTNGCEIKPSVAAAPPAVQIAGRVNELFALVMTDPDAPSPSEPTMREWLHWLVVNI 91
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 55.6 bits (128), Expect = 9e-09
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +3
Query: 162 VNEGNELTPTQVNDIPSVSWEAASDQ--FYTLAMTDPDAPSRADPKFREWHHWLVANV 329
V+ G EL P+ V P V +D FYTL M DPDAPS +DP RE+ HWLV ++
Sbjct: 39 VSNGCELKPSMVTHQPRVE-VGGNDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDI 95
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 54.0 bits (124), Expect = 3e-08
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 159 EVNEGNELTPTQVNDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWLVANV 329
E+ G+EL P+QV + P + E + YTL M DPDAPS ++P RE+ HW+V ++
Sbjct: 33 EMTNGSELKPSQVLNQPRIYIEGRDMRTLYTLVMVDPDAPSPSNPTKREYLHWMVTDI 90
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 54.0 bits (124), Expect = 3e-08
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 144 YPSGVEVNEGNELTPTQVNDIPSVSWEAAS-DQFYTLAMTDPDAPSRADPKFREWHHWLV 320
Y S +V G+EL P+ V P V + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YSSNKQVFNGHELFPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 321 ANV 329
++
Sbjct: 91 TDI 93
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 53.2 bits (122), Expect = 5e-08
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +3
Query: 162 VNEGNELTPTQVNDIPSVSWEAASDQ--FYTLAMTDPDAPSRADPKFREWHHWLVANV 329
V+ G EL P+ V P V +D FYTL M DPDAPS ++P RE+ HWLV ++
Sbjct: 38 VSNGCELKPSMVTQQPRVV-VGGNDMRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDI 94
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 144 YPSGVEVNEGNELTPTQVNDIPSVSWEAAS-DQFYTLAMTDPDAPSRADPKFREWHHWLV 320
Y S V G+EL P+ V P V + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YNSNKLVFNGHELYPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 321 ANV 329
++
Sbjct: 91 TDI 93
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 50.8 bits (116), Expect = 3e-07
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 144 YPSGVEVNEGNELTPTQVNDIPSVSWEAAS-DQFYTLAMTDPDAPSRADPKFREWHHWLV 320
Y + +V G+E P+ V P V + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YGANKQVFNGHEFFPSAVAGKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 321 ANV 329
++
Sbjct: 91 TDI 93
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 50.0 bits (114), Expect = 4e-07
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 144 YPSGVEVNEGNELTPTQVNDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWLV 320
Y S V G+E P+ V P V + + F+TL MTDPD P +DP RE HW+V
Sbjct: 31 YNSNKLVFNGHEFYPSAVVSKPRVEVQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIV 90
Query: 321 ANV 329
++
Sbjct: 91 TDI 93
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 46.4 bits (105), Expect = 5e-06
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 153 GVEVNEGNELTPTQVNDIPSVSWEAASDQF---YTLAMTDPDAPSRADPKFREWHHWLVA 323
G V G E + V+ P V E D F YTL M DPDAP+ ++P RE+ HW+V
Sbjct: 31 GRPVFNGKEFRSSAVSMKPRV--EIGGDDFRFAYTLVMVDPDAPNPSNPTLREYLHWMVT 88
Query: 324 NV 329
++
Sbjct: 89 DI 90
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 153 GVEVNEGNELTPTQVNDIPSVSWEAASDQF---YTLAMTDPDAPSRADPKFREWHHWLVA 323
G+ V G EL V + P V E D YTL M DPDAP+ ++P RE+ HW+V
Sbjct: 33 GMPVISGVELRAPAVAEKPVV--EVGGDDLRVAYTLVMVDPDAPNPSNPTLREYLHWMVT 90
Query: 324 NV 329
++
Sbjct: 91 DI 92
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 45.6 bits (103), Expect = 1e-05
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 171 GNELTPTQVNDIPSVSWEAASDQF-YTLAMTDPDAPSRADPKFREWHHWLVANV 329
G L P+ V P V + YTL + DPDAPS +DP RE+ HW+V ++
Sbjct: 35 GAALKPSAVVSKPQVDVGGNDMRVSYTLVLVDPDAPSPSDPSLREYLHWMVTDI 88
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 42.7 bits (96), Expect = 7e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 150 SGVEVNEGNELTPTQVNDIPSVSWEAASDQFYTLAMTDPDAPSRADPKFREWHHWLVANV 329
+GV V G +L P+ V+ PSV M DPDAP+ ++P RE+ HWLV ++
Sbjct: 31 NGVRVVNGEDLRPSAVSARPSVE-----------VMVDPDAPNPSNPTLREYLHWLVTDI 79
>09_04_0714 -
19685374-19685430,19685606-19685669,19686117-19686256,
19687916-19687969,19688407-19688451,19689480-19689517,
19689713-19689831,19689955-19690016,19691038-19691157
Length = 232
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 159 EVNEGNELTPTQVNDIPSVSWEAASD-QFYTLAMTDPDAPSRADPKFREWHH 311
E+ G + + V P V E + YTL M DPDAPS + P++RE+ H
Sbjct: 9 EITNGTGVRSSAVFTAPHVEIEGRDQTKLYTLVMVDPDAPSPSKPEYREYLH 60
>01_06_0704 +
31336622-31336825,31336948-31337009,31337040-31337171,
31337304-31337341,31337825-31337872,31338545-31338780
Length = 239
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 171 GNELTPTQVNDIPSVSWEAASDQ-FYTLAMTDPDAPSRADPKFREWHHWL 317
G EL P+ P V + FYTL + DPDAPS ++P E+ H+L
Sbjct: 41 GAELKPSATVHKPRVDIGGTDLRVFYTLVLVDPDAPSPSNPSLGEYLHYL 90
>05_05_0167 - 22868506-22868580,22868693-22869103
Length = 161
Score = 32.3 bits (70), Expect = 0.095
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 207 PSVSWEAASDQFYTLAMT--DPDAPSRADPKFREWHHWLVANV 329
P V W D +LA+ D DAP P W HW+VAN+
Sbjct: 37 PPVEWYGVPDGTRSLALVVHDVDAPDPDGP-IVPWTHWVVANI 78
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 147 PSGVEVNEGNELTPTQVNDIPSVSWEAASDQFYTL 251
P ++V GN+LTPT V++ P ++ D + +
Sbjct: 74 PINLQVEHGNDLTPTSVSEKPGNNYLPCLDTLFIM 108
>04_03_0121 + 11506644-11508107
Length = 487
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 174 NELTPTQVNDIPSVSWEAASDQFYTLAMTDPD 269
N + + + +P + W A DQ+Y M D +
Sbjct: 375 NSVLESMTHGVPIIGWPLAGDQYYNAKMLDEE 406
>12_02_0741 -
22690452-22690528,22690693-22690813,22690871-22690951,
22691048-22691096,22691324-22691409,22691494-22691571,
22691647-22691796,22691884-22691922,22692194-22692283,
22692568-22692630,22692722-22692791,22693109-22693155,
22693268-22693330,22693411-22693461,22693702-22693785,
22693932-22693996,22694322-22694378,22694452-22694569,
22694664-22694714,22694789-22694875,22694956-22695035,
22695962-22696127
Length = 590
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 207 PSVSWEAASDQFYTLAMTDPDAPSRA 284
PS+ W AASD A + PDA ++A
Sbjct: 347 PSIQWIAASDLEDATATSAPDAHAKA 372
>09_04_0076 + 14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 147 PSGVEVNEGN-EL-TPTQVNDIPSVSWEAASDQFYTLAMTDPDAPS 278
P G E GN E+ TPT + IP WE A + + TD PS
Sbjct: 923 PKGPEWAGGNWEIKTPTNMKSIP--QWELAGEVMPYMKTTDAGIPS 966
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = -2
Query: 232 DAASQDTDGISFT*VGVSSLPSFTSTPDGYFXXXXXXXXXXXXXXXTWFASKDFTMVDMA 53
D +S+D D +S+ VGV + + +WF + D ++ +++
Sbjct: 716 DPSSEDKDNLSYRLVGVVEHRGLGNDAGHFLAYVRASPRQETSGSSSWFRASDDSIREVS 775
Query: 52 LANTL-CIVFFLW 17
L L C + L+
Sbjct: 776 LEEVLKCEAYLLF 788
>10_08_0943 +
21728294-21728675,21728767-21728840,21729469-21730443,
21730617-21730683,21730765-21730827,21731001-21731064,
21731162-21731255,21731352-21731435,21731523-21731612,
21731708-21731735,21732117-21732596,21732679-21732740,
21732820-21732929,21733014-21733101,21733228-21733557,
21733782-21733904
Length = 1037
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 327 RWRRASDATRGTWDRRVMARPDQS*PTYRTGPTQLPRIQT 208
R R+ASDA R +R++A PD P + +Q +Q+
Sbjct: 105 RKRKASDAGRFVARKRLLAAPDADLPEHELRQSQQLIVQS 144
>09_06_0041 - 20440266-20441381
Length = 371
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 265 RTRHHAPIPSSASGITGSSPT 327
R RHH+P S A+G S+PT
Sbjct: 8 RRRHHSPPASIAAGGDSSTPT 28
>08_01_0972 - 9789453-9790364,9790383-9790861,9791071-9792238
Length = 852
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -1
Query: 218 GYRRDIVHLSRCQLITFVYFNPRRVFHSSQSCRRFSHDIRHHLVCLEGFHDGRHG 54
GY +++VH + QL+ F R F R + D+ + DG HG
Sbjct: 407 GYLKELVHRNMLQLVQKNSFGRIRRFKMHDIVRELAVDLCRRECFGITYEDGHHG 461
>01_03_0184 + 13560830-13562981,13563604-13564088
Length = 878
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 89 VCLEGFHDGRHGSRKHPV 36
+C+ G H RHG R+HPV
Sbjct: 827 LCVTG-HGPRHGPRRHPV 843
>01_01_0555 + 4080316-4081680
Length = 454
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 191 SSERYPVCILGSCVGPVLYVGYD*SGRAIT 280
++E+ PV ILG+ ++VGYD +T
Sbjct: 415 TTEQQPVSILGNLAQQNIHVGYDLDAGTVT 444
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,172,557
Number of Sequences: 37544
Number of extensions: 210872
Number of successful extensions: 615
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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