Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_J04
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 92 9e-20
03_01_0034 + 318432-318825,318902-319851 92 9e-20
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 92 9e-20
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 92 9e-20
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 91 2e-19
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 91 2e-19
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 91 2e-19
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 89 1e-18
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 50 6e-07
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 48 1e-06
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 48 1e-06
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 48 1e-06
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 1.6
03_02_0134 + 5820068-5820178,5822439-5822508,5822893-5822939,582... 27 2.8
11_06_0516 + 24502645-24504507 27 3.7
09_01_0092 - 1311892-1312055,1312490-1312574,1312628-1312936,131... 27 4.9
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 27 4.9
01_06_1088 - 34439311-34439987,34440080-34440136,34442790-344429... 27 4.9
06_03_0869 + 25548853-25549074,25549191-25549251,25549912-255500... 26 6.4
05_01_0602 + 5394341-5394520,5395083-5395586 26 6.4
04_04_1564 + 34449233-34449412,34449967-34450470 26 6.4
02_01_0653 - 4856197-4856268,4857464-4857506,4857607-4857661,485... 26 6.4
05_07_0322 + 29249761-29250015,29250776-29250873,29251483-292515... 26 8.5
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLVSEYQQY
Sbjct: 565 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 605
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLVSEYQQY
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLVSEYQQY
Sbjct: 406 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLVSEYQQY
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 91.1 bits (216), Expect = 2e-19
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLV+EYQQY
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 91.1 bits (216), Expect = 2e-19
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLV+EYQQY
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 91.1 bits (216), Expect = 2e-19
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYTGEGMDEMEFT+AESNMNDLV+EYQQY
Sbjct: 385 FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 88.6 bits (210), Expect = 1e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQY 161
FTAMFRRKAFLHWYT EGMDEMEFT+AESNMNDLV+EYQQY
Sbjct: 401 FTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQY 441
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 49.6 bits (113), Expect = 6e-07
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 33 RGFTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQ 158
R F M+ ++AF+HWY GEGM+E EF++A ++ L +Y++
Sbjct: 474 RKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 48.4 bits (110), Expect = 1e-06
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQ 158
F M+ ++AF+HWY GEGM+E EF++A ++ L +Y++
Sbjct: 395 FDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQ 158
F M+ ++AF+HWY GEGM+E EF++A ++ L +Y++
Sbjct: 395 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 48.4 bits (110), Expect = 1e-06
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +3
Query: 39 FTAMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSEYQQ 158
F M+ ++AF+HWY GEGM+E EF++A ++ L +Y++
Sbjct: 395 FDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 124 LSASVNSISSMPSPVYQCKKALRLNIAVN 38
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>03_02_0134 +
5820068-5820178,5822439-5822508,5822893-5822939,
5823067-5823175,5823355-5823440,5823768-5823858,
5824204-5824289,5824649-5824762
Length = 237
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 124 LSASVNSISSMPSPVYQCKKALRLNIAVNPRIAFVQPGG 8
LS S NS+S +P V + L LN++ N IA + G
Sbjct: 122 LSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIG 160
>11_06_0516 + 24502645-24504507
Length = 620
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 15 GCTNAIRGFT--AMFRRKAFLHWYTGEGMDEMEFTDAESNMNDLVSE 149
GC + F A+ +++ +HW+ GEG + +S ++L+++
Sbjct: 193 GCVLTLAAFPECAVIKKRLLIHWWLGEGF-VRSAAEGKSRFDELIAK 238
>09_01_0092 -
1311892-1312055,1312490-1312574,1312628-1312936,
1314155-1314229,1314363-1314438,1315594-1315679,
1315958-1316203,1316399-1316614
Length = 418
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 124 LSASVNSISSMPSPVYQCKKALRLNIAV 41
L+ S N+IS +P + C K RLN+ V
Sbjct: 207 LNESNNTISVLPDELAGCSKLFRLNLEV 234
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -2
Query: 136 SFMLLSASVNSISSMPSPVYQCKKALRLNIAVN 38
S +L S N + S+P + +C+ + L+++ N
Sbjct: 261 SLKILDVSGNKLRSLPDSISKCRSLVELDVSYN 293
>01_06_1088 -
34439311-34439987,34440080-34440136,34442790-34442919,
34443499-34443740,34443857-34444008,34444381-34444461,
34444547-34444612,34444692-34444763,34444843-34444984,
34445146-34445645,34446625-34447192,34447248-34447257
Length = 898
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 25 MRFEGSPLCSDARLSCTGTPARAWTR 102
+R EG+P+CS R S G TR
Sbjct: 479 LRLEGNPICSKVRASYCGNKKNTRTR 504
>06_03_0869 +
25548853-25549074,25549191-25549251,25549912-25550006,
25550094-25550127,25550551-25550605,25550687-25550729,
25551064-25551135
Length = 193
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 241 PQNSPCHYKSLLFRVTLRIPVT 306
P + P H KS +F L IP+T
Sbjct: 139 PDDMPAHIKSSMFGCALTIPIT 160
>05_01_0602 + 5394341-5394520,5395083-5395586
Length = 227
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 143 DEIVHVALRIRELH-LVHALAGVP 75
DE+ +VA R RE+H H L G+P
Sbjct: 112 DELAYVATRAREVHDFWHVLFGLP 135
>04_04_1564 + 34449233-34449412,34449967-34450470
Length = 227
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 143 DEIVHVALRIRELH-LVHALAGVP 75
DE+ +VA R RE+H H L G+P
Sbjct: 112 DELAYVATRAREVHDFWHVLFGLP 135
>02_01_0653 -
4856197-4856268,4857464-4857506,4857607-4857661,
4857867-4857900,4857989-4858083,4858720-4858780,
4858858-4858932
Length = 144
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 241 PQNSPCHYKSLLFRVTLRIPVT 306
P + P H KS +F L IP+T
Sbjct: 90 PDDMPAHIKSSMFGCALTIPIT 111
>05_07_0322 +
29249761-29250015,29250776-29250873,29251483-29251513,
29252225-29252324,29252449-29252519,29252852-29252917,
29253258-29253401,29253573-29253674
Length = 288
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -1
Query: 104 HLVHA----LAGVPVQESLASEHSGEPSNRIRAARGIH 3
H VHA + G+ + + E +GEP +RA G+H
Sbjct: 107 HAVHAGGRHVIGIIPKSLMPREVTGEPVGEVRAVSGMH 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,806,296
Number of Sequences: 37544
Number of extensions: 89762
Number of successful extensions: 283
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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