Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_J02
         (106 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...    72   9e-14
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...    72   9e-14
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...    72   9e-14
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...    72   9e-14
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...    72   9e-14
EF587234-1|ABQ85891.1|  981|Drosophila melanogaster MCPH1 isofor...    26   6.1  
BT022275-1|AAY54691.1|  219|Drosophila melanogaster IP08164p pro...    26   6.1  
AE014134-2327|AAF53282.2|  281|Drosophila melanogaster CG16825-P...    26   6.1  
AE013599-1359|AAM68699.2|  219|Drosophila melanogaster CG30038-P...    26   6.1  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score = 72.1 bits (169), Expect = 9e-14
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 18  RRPVRCYRYCKNKPYPKSRFCRGVPDPKI 104
           RRP RCYRYCKNKPYPKSRFCRGVPDPKI
Sbjct: 3   RRPARCYRYCKNKPYPKSRFCRGVPDPKI 31


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score = 72.1 bits (169), Expect = 9e-14
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 18  RRPVRCYRYCKNKPYPKSRFCRGVPDPKI 104
           RRP RCYRYCKNKPYPKSRFCRGVPDPKI
Sbjct: 9   RRPARCYRYCKNKPYPKSRFCRGVPDPKI 37


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score = 72.1 bits (169), Expect = 9e-14
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 18  RRPVRCYRYCKNKPYPKSRFCRGVPDPKI 104
           RRP RCYRYCKNKPYPKSRFCRGVPDPKI
Sbjct: 3   RRPARCYRYCKNKPYPKSRFCRGVPDPKI 31


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score = 72.1 bits (169), Expect = 9e-14
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 18  RRPVRCYRYCKNKPYPKSRFCRGVPDPKI 104
           RRP RCYRYCKNKPYPKSRFCRGVPDPKI
Sbjct: 16  RRPARCYRYCKNKPYPKSRFCRGVPDPKI 44


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score = 72.1 bits (169), Expect = 9e-14
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 18  RRPVRCYRYCKNKPYPKSRFCRGVPDPKI 104
           RRP RCYRYCKNKPYPKSRFCRGVPDPKI
Sbjct: 22  RRPARCYRYCKNKPYPKSRFCRGVPDPKI 50


>EF587234-1|ABQ85891.1|  981|Drosophila melanogaster MCPH1 isoform A
           protein.
          Length = 981

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 9   QWVRRPVRCYRYCKNKPYPKSRFCRGV 89
           QWV   +R  ++   +PY  +RF R +
Sbjct: 819 QWVLASIRAGKWINEEPYELTRFSRAI 845


>BT022275-1|AAY54691.1|  219|Drosophila melanogaster IP08164p
           protein.
          Length = 219

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 9   QWVRRPVRCYRYCKNKPYPKSRFCRGV 89
           QWV   +R  ++   +PY  +RF R +
Sbjct: 57  QWVLASIRAGKWINEEPYELTRFSRAI 83


>AE014134-2327|AAF53282.2|  281|Drosophila melanogaster CG16825-PA
           protein.
          Length = 281

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 101 LWVRHTPTKPRFRIRFILTISITSHWSAH 15
           L V  + + P F +R ++T S TSH+ A+
Sbjct: 2   LSVTRSASAPNFSVRSVVTYSSTSHFEAN 30


>AE013599-1359|AAM68699.2|  219|Drosophila melanogaster CG30038-PA
           protein.
          Length = 219

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 9   QWVRRPVRCYRYCKNKPYPKSRFCRGV 89
           QWV   +R  ++   +PY  +RF R +
Sbjct: 57  QWVLASIRAGKWINEEPYELTRFSRAI 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,509,952
Number of Sequences: 53049
Number of extensions: 64504
Number of successful extensions: 89
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 24,988,368
effective HSP length: 16
effective length of database: 24,139,584
effective search space used: 434512512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)