Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_J02
         (106 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   1.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   7.4  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    18   9.8  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    18   9.8  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    18   9.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    18   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    18   9.8  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    18   9.8  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = +3

Query: 9   QWVR-RPVRCYRYC 47
           QW   R ++CY YC
Sbjct: 62  QWPETRQLKCYMYC 75


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -2

Query: 78  KTEI*D-TVYSYNIDN 34
           K E+ D TV++YNI N
Sbjct: 104 KGELFDATVFTYNITN 119


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
          opsin protein.
          Length = 377

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -3

Query: 38 ITSHWSAHPLP 6
          +  HW A P P
Sbjct: 42 VRPHWRAFPAP 52


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6
          variant 2 precursor protein.
          Length = 94

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 30 RCYRYCKN 53
          RC R+C N
Sbjct: 49 RCQRFCPN 56


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6
          variant 1 precursor protein.
          Length = 92

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 30 RCYRYCKN 53
          RC R+C N
Sbjct: 49 RCQRFCPN 56


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 60  TVYSYNIDN 34
           TV++YNI N
Sbjct: 208 TVFTYNITN 216


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 60  TVYSYNIDN 34
           TV++YNI N
Sbjct: 223 TVFTYNITN 231


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 69  SRFCRGVPDPK 101
           +R C G PD K
Sbjct: 12  ARICHGNPDAK 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,099
Number of Sequences: 438
Number of extensions: 425
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 15
effective length of database: 139,773
effective search space used:  2655687
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)