Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I21
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    22   1.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   1.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   1.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   1.9  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   1.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   1.9  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    21   3.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   5.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    20   7.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    20   7.7  

>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 98  RRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAILRSQ 226
           +RP  A +   L + KR    N Y T+  +  L R   +  +Q
Sbjct: 21  KRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQ 63


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 164 DLPLAISWL 138
           DLPL+ISWL
Sbjct: 638 DLPLSISWL 646


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  KEHYPSSIQSWSEEV 129
           K +YPS I  W +++
Sbjct: 62  KNNYPSDIDQWHDKI 76


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  KEHYPSSIQSWSEEV 129
           K +YPS I  W +++
Sbjct: 62  KNNYPSDIDQWHDKI 76


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 238 LDRPLRPKNS*GATQSSFSQVCTVMI 161
           LD  ++PK+  G+   S   +CTV++
Sbjct: 25  LDCSIKPKDHNGSIYWSMYHLCTVVL 50


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 85  KEHYPSSIQSWSEEV 129
           K +YPS I  W +++
Sbjct: 62  KNNYPSDIDQWHDKI 76


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 98  RRPFKAGARRSLFKAKRLLKANHYRTDLTKATLRRASAILRSQ 226
           +RP  A +   L + KR    N Y T+  +  L R   +  +Q
Sbjct: 21  KRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQ 63


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 301 NLFLQAYKLFRLSCC 257
           N F +A+KL   +CC
Sbjct: 353 NKFREAFKLMLPNCC 367


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 118 SSFEWTTDNVLY 83
           +S+ WTTD++++
Sbjct: 179 ASYGWTTDDLVF 190


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 118 SSFEWTTDNVLY 83
           +S+ WTTD++++
Sbjct: 179 ASYGWTTDDLVF 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,728
Number of Sequences: 438
Number of extensions: 1031
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)