Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I20
         (362 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   1.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   4.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   4.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   4.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   4.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   4.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   7.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   7.8  

>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 284 MGAKFEDVHEECGSKNGE 337
           +  KF D+ E+C  +NG+
Sbjct: 368 IACKFADIKEKCDRRNGK 385


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
          precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 15 GQNINWRTLPWPSHFD 62
          G N NW TL  P+  D
Sbjct: 23 GSNWNWNTLLRPNFLD 38


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 15  GQNINWRTLPWPSHFD 62
           G N NW TL  P+  D
Sbjct: 67  GSNWNWNTLLRPNFLD 82


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 15  GQNINWRTLPWPSHFD 62
           G N NW TL  P+  D
Sbjct: 67  GSNWNWNTLLRPNFLD 82


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 15  GQNINWRTLPWPSHFD 62
           G N NW TL  P+  D
Sbjct: 67  GSNWNWNTLLRPNFLD 82


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 143 ASATLTHPWLIQ 178
           AS  L HPW+ Q
Sbjct: 161 ASEALKHPWICQ 172


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 286 HSFESYHSGDCF 251
           H F  Y SG+C+
Sbjct: 298 HYFTKYGSGECY 309


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 72  TNI*RPRTSLGNCS*KIRMIRFSKHQRHSPTLG 170
           T I +  T   N S   ++ +F+K ++ + TLG
Sbjct: 306 TRINKQHTRGNNFSLSRKLAKFAKEKKAAKTLG 338


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,821
Number of Sequences: 438
Number of extensions: 2087
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)