Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I19
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 113 3e-26
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 113 3e-26
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 113 3e-26
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 40 5e-04
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 40 5e-04
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 40 5e-04
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 40 5e-04
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 38 0.001
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 38 0.001
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 34 0.025
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 34 0.025
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 0.73
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 0.73
Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 26 5.1
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 26 5.1
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 26 6.8
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 26 6.8
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 26 6.8
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 26 6.8
AC025715-2|AAK68447.2| 439|Caenorhabditis elegans Hypothetical ... 26 6.8
Z93396-3|CAB07712.1| 597|Caenorhabditis elegans Hypothetical pr... 25 8.9
X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium ... 25 8.9
AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical... 25 8.9
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 25 8.9
AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical... 25 8.9
AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical... 25 8.9
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 113 bits (272), Expect = 3e-26
Identities = 64/102 (62%), Positives = 73/102 (71%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
L+EALD+I+PP RPTD+ LRLPLQDVYKIGGIGTVPVGRVETGI+KPG VV F P
Sbjct: 194 LLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP-QNVT 252
Query: 190 LEVKSVGNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRG 315
EVKSV H L PG++ V KNVSVK++RRG
Sbjct: 253 TEVKSV-EMHHESL--PEAVPGDN--VGFNVKNVSVKDIRRG 289
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 113 bits (272), Expect = 3e-26
Identities = 64/102 (62%), Positives = 73/102 (71%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
L+EALD+I+PP RPTD+ LRLPLQDVYKIGGIGTVPVGRVETGI+KPG VV F P
Sbjct: 228 LLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP-QNVT 286
Query: 190 LEVKSVGNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRG 315
EVKSV H L PG++ V KNVSVK++RRG
Sbjct: 287 TEVKSV-EMHHESL--PEAVPGDN--VGFNVKNVSVKDIRRG 323
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 113 bits (272), Expect = 3e-26
Identities = 64/102 (62%), Positives = 73/102 (71%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
L+EALD+I+PP RPTD+ LRLPLQDVYKIGGIGTVPVGRVETGI+KPG VV F P
Sbjct: 228 LLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAP-QNVT 286
Query: 190 LEVKSVGNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRG 315
EVKSV H L PG++ V KNVSVK++RRG
Sbjct: 287 TEVKSV-EMHHESL--PEAVPGDN--VGFNVKNVSVKDIRRG 323
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
L+E +D+ + P P+D LR+ + DV K+ V G++E+G ++ V VT+
Sbjct: 375 LLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTAA 434
Query: 190 LEVKSVGNCTHRRLYRG 240
+ N R + G
Sbjct: 435 TVKECANNDGSRHCFAG 451
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
L+E +D+ + P P+D LR+ + DV K+ V G++E+G ++ V VT+
Sbjct: 393 LLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTAA 452
Query: 190 LEVKSVGNCTHRRLYRG 240
+ N R + G
Sbjct: 453 TVKECANNDGSRHCFAG 469
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 39.5 bits (88), Expect = 5e-04
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 10 LIEALD-AILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTS 186
L+E LD + P R ++ + VY I G GTV G++E GILK G +
Sbjct: 233 LLEVLDNKFVIPERKVNEEPMFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKD 292
Query: 187 LLEVKSV-GNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRG 315
VKSV R PG+ + V+ R + K++RRG
Sbjct: 293 GTTVKSVISGLESFRKTVDQAEPGDQLGVLLR--GLGPKDVRRG 334
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 39.5 bits (88), Expect = 5e-04
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 10 LIEALD-AILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTS 186
L+E LD + P R ++ + VY I G GTV G++E GILK G +
Sbjct: 234 LLEVLDNKFVIPERKVNEEPMFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKD 293
Query: 187 LLEVKSV-GNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRG 315
VKSV R PG+ + V+ R + K++RRG
Sbjct: 294 GTTVKSVISGLESFRKTVDQAEPGDQLGVLLR--GLGPKDVRRG 335
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 39.5 bits (88), Expect = 5e-04
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 10 LIEALD-AILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTS 186
L+E LD + P R ++ + VY I G GTV G++E GILK G +
Sbjct: 234 LLEVLDNKFVIPERKVNEEPMFAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKD 293
Query: 187 LLEVKSV-GNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRG 315
VKSV R PG+ + V+ R + K++RRG
Sbjct: 294 GTTVKSVISGLESFRKTVDQAEPGDQLGVLLR--GLGPKDVRRG 335
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVV 162
LI+ALD++ P R +P+ I G GTV VG +E G+LK G V
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 10 LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVV 162
LI+ALD++ P R +P+ I G GTV VG +E G+LK G V
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 33.9 bits (74), Expect = 0.025
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 151 GTVVRFCPCVTSLLEVKSVGNCTHR 225
GTV R+C C T+ E NCTHR
Sbjct: 513 GTVTRYCNCQTAKWETPDTTNCTHR 537
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 33.9 bits (74), Expect = 0.025
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 151 GTVVRFCPCVTSLLEVKSVGNCTHR 225
GTV R+C C T+ E NCTHR
Sbjct: 513 GTVTRYCNCQTAKWETPDTTNCTHR 537
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 0.73
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 31 ILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSLLEVKSV 207
I P R + + + + I G GTV G V G+L+ T + F P + VK++
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF-PALNEKRRVKTL 248
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 0.73
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 31 ILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSLLEVKSV 207
I P R + + + + I G GTV G V G+L+ T + F P + VK++
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF-PALNEKRRVKTL 207
>Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical
protein W08G11.4 protein.
Length = 633
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 154 TVVRFCPCVTSLLEVKSVGNCTH 222
++V C T L E+KS+ NCTH
Sbjct: 587 SLVFCCWIETILFEIKSIDNCTH 609
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 IEALDAILPP-ARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCP 174
IE +D +LP R + +R + + Y +GTV +G++E+G ++ G + P
Sbjct: 322 IEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMP 374
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 24 RRHPSACSPH*QGSPSSPARRIQNRR 101
+RHP+ QG P P +RIQN +
Sbjct: 542 QRHPNEGQQFQQGPPPPPPQRIQNHQ 567
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 24 RRHPSACSPH*QGSPSSPARRIQNRR 101
+RHP+ QG P P +RIQN +
Sbjct: 542 QRHPNEGQQFQQGPPPPPPQRIQNHQ 567
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 242 LPL*SLRWVQFPTDLTSSSDVTQGQKRTTVPGFRIPVSTLPTGTVPIP 99
LPL + V PT TSS+ + TTVP +T T T P P
Sbjct: 575 LPLRKVSTVP-PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKP 621
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 242 LPL*SLRWVQFPTDLTSSSDVTQGQKRTTVPGFRIPVSTLPTGTVPIP 99
LPL + V PT TSS+ + TTVP +T T T P P
Sbjct: 575 LPLRKVSTVP-PTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKP 621
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 158 TVPGFRIPVSTLPTGTVP--IPPILYT 84
T+P ++P+ TLP T P +PP+ T
Sbjct: 351 TLPPVQVPIQTLPPQTRPPQLPPVQIT 377
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 158 TVPGFRIPVSTLPTGTVP--IPPILYT 84
T+P ++P+ TLP T P +PP+ T
Sbjct: 448 TLPPVQVPIQTLPPQTRPPQLPPVQIT 474
>AC025715-2|AAK68447.2| 439|Caenorhabditis elegans Hypothetical
protein Y38F2AR.6 protein.
Length = 439
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -1
Query: 160 QQYQALGYQFQLYPRVLFQYRRFCIRLAGEDGEPCQWGEQAEGWRR 23
+Q A GY+FQ++P++ + F ++ + C Q +G+ R
Sbjct: 270 EQEMADGYKFQIFPKISTKNPNFPFQIDKKSVMKCLLALQTKGFVR 315
>Z93396-3|CAB07712.1| 597|Caenorhabditis elegans Hypothetical
protein ZC15.5 protein.
Length = 597
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 148 PGTVVRFCPCVTSLLEVKSVGNCTHRRLYRGSLYPGEH 261
P T++ CP LLE + + H+R + S Y H
Sbjct: 562 PTTIILRCPAAAQLLEAQEMTELQHQR--QSSRYSVRH 597
>X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 880
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 112 LFQYRRFCIRLAGEDGEPCQW 50
L QYRRF ++ GE G P W
Sbjct: 830 LLQYRRFNRKVNGELGGPMGW 850
>AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical
protein Y113G7A.4a protein.
Length = 880
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 112 LFQYRRFCIRLAGEDGEPCQW 50
L QYRRF ++ GE G P W
Sbjct: 830 LLQYRRFNRKVNGELGGPMGW 850
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/80 (18%), Positives = 36/80 (45%)
Frame = +1
Query: 76 LQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSLLEVKSVGNCTHRRLYRGSLYPG 255
+ D+Y + G+GT+ G + +G ++ ++ P + + +R+ G + G
Sbjct: 377 IDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCG 436
Query: 256 EHMLVVKRQKNVSVKELRRG 315
+ K + K++R+G
Sbjct: 437 QSASFA--LKKIPKKDVRKG 454
>AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical
protein Y47G6A.7b protein.
Length = 401
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 167 FAPA*HHYLKSSPLETAPTGGSTEEACTRVST 262
F+ + HH L+SSP++ P + TRV T
Sbjct: 7 FSSSTHHLLESSPIDDDPGPSESIALQTRVPT 38
>AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical
protein Y47G6A.7a protein.
Length = 410
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 167 FAPA*HHYLKSSPLETAPTGGSTEEACTRVST 262
F+ + HH L+SSP++ P + TRV T
Sbjct: 7 FSSSTHHLLESSPIDDDPGPSESIALQTRVPT 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,226,880
Number of Sequences: 27780
Number of extensions: 169077
Number of successful extensions: 594
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -