Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I19
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   126   5e-32
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...   126   5e-32
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   126   5e-32
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    38   2e-05
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    28   0.031
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   3.6  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   6.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   6.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    20   8.3  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  126 bits (305), Expect = 5e-32
 Identities = 71/103 (68%), Positives = 77/103 (74%)
 Frame = +1

Query: 10  LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
           LIEALDAILPP+RPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPG +V F P   + 
Sbjct: 228 LIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALT- 286

Query: 190 LEVKSVGNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRGY 318
            EVKSV    H  L      PG++  V    KN+SVKELRRGY
Sbjct: 287 TEVKSV-EMHHEALTEA--LPGDN--VGFNVKNISVKELRRGY 324


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score =  126 bits (305), Expect = 5e-32
 Identities = 72/103 (69%), Positives = 76/103 (73%)
 Frame = +1

Query: 10  LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
           LIEALDAILPP RPTDKALRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV F P   + 
Sbjct: 171 LIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLT- 229

Query: 190 LEVKSVGNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRGY 318
            EVKSV    H  L      PG++  V    KNVSVKELRRGY
Sbjct: 230 TEVKSV-EMHHEALQEA--VPGDN--VGFNVKNVSVKELRRGY 267


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  126 bits (305), Expect = 5e-32
 Identities = 72/103 (69%), Positives = 76/103 (73%)
 Frame = +1

Query: 10  LIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVRFCPCVTSL 189
           LIEALDAILPP RPTDKALRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV F P   + 
Sbjct: 228 LIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLT- 286

Query: 190 LEVKSVGNCTHRRLYRGSLYPGEHMLVVKRQKNVSVKELRRGY 318
            EVKSV    H  L      PG++  V    KNVSVKELRRGY
Sbjct: 287 TEVKSV-EMHHEALQEA--VPGDN--VGFNVKNVSVKELRRGY 324


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 38.3 bits (85), Expect = 2e-05
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 10  LIEALDAILPPARPTDKA 63
           LIEALDAILPP RPTDKA
Sbjct: 155 LIEALDAILPPTRPTDKA 172


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 0.031
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 283 KNVSVKELRRGY 318
           KN+SVKELRRGY
Sbjct: 24  KNISVKELRRGY 35


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 20  PSTPSFRLLAPLTRLSVFPCKTYTKSAVLEQYPWVEL 130
           P +  +R L  +   + F  +TY K    ++YPWV+L
Sbjct: 214 PKSSGWRKLRNIVHWTPF-FQTYKK----QRYPWVQL 245


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 88  YKIGGIGTVPVGRVETGI 141
           ++IG    VP+ R+ET I
Sbjct: 22  FQIGLRAVVPICRIETSI 39


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 82  LAGEDGEPCQWG 47
           + G  G PC WG
Sbjct: 541 VCGVKGIPCSWG 552


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 17  RPSTPSFRLLAPLTRLSVFPCKTYTKSAVLEQYPWVEL 130
           R  +  +R L  +   + F  +TY K    ++YPWV+L
Sbjct: 128 RKKSSGWRKLRNIVHWTPF-FQTYKK----QRYPWVQL 160


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,015
Number of Sequences: 438
Number of extensions: 1932
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)