Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I18
(347 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p pro... 46 1e-05
AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB... 46 1e-05
AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA... 46 1e-05
BT022951-1|AAY55367.1| 316|Drosophila melanogaster IP11180p pro... 29 1.6
AE014297-90|AAN13316.1| 316|Drosophila melanogaster CG31525-PA ... 29 1.6
X56689-1|CAA40017.1| 716|Drosophila melanogaster Protein on Ecd... 28 2.8
BT001867-1|AAN71637.1| 502|Drosophila melanogaster SD02426p pro... 28 2.8
AY118552-1|AAM49921.1| 693|Drosophila melanogaster LD34072p pro... 28 2.8
AE014296-2942|AAF49317.3| 502|Drosophila melanogaster CG6143-PA... 28 2.8
AE014296-2941|AAS64975.1| 693|Drosophila melanogaster CG6143-PC... 28 2.8
AE014296-2940|AAF49319.3| 716|Drosophila melanogaster CG6143-PB... 28 2.8
X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormon... 28 3.7
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 28 3.7
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 28 3.7
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 28 3.7
AY069403-1|AAL39548.1| 268|Drosophila melanogaster LD10351p pro... 27 4.9
AF157066-1|AAD43129.1| 2262|Drosophila melanogaster klarsicht pr... 27 4.9
AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA... 27 4.9
AY075178-1|AAL68048.1| 326|Drosophila melanogaster AT12771p pro... 27 8.6
AY070710-1|AAL48181.1| 662|Drosophila melanogaster SD02943p pro... 27 8.6
AE014134-2093|AAF53119.1| 326|Drosophila melanogaster CG14936-P... 27 8.6
AE014134-1532|AAF52688.1| 662|Drosophila melanogaster CG13097-P... 27 8.6
>BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p
protein.
Length = 919
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEETDKEPDAG---SDALLPRPRSYVNLICVHCKDKSATFAGY 301
S K+ D D+ G++ KE + + R RS++ LICVHC+ K TF Y
Sbjct: 430 STKKERTSRKDKDKESSGDDRSKERRSSRHRDEDHNNRKRSFIKLICVHCRIKCVTFKEY 489
Query: 302 SKHLLSSKHRAAM 340
+ HL S H+ +M
Sbjct: 490 NYHLNSRSHKNSM 502
>AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB,
isoform B protein.
Length = 919
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEETDKEPDAG---SDALLPRPRSYVNLICVHCKDKSATFAGY 301
S K+ D D+ G++ KE + + R RS++ LICVHC+ K TF Y
Sbjct: 430 STKKERTSRKDKDKESSGDDRSKERRSSRHRDEDHNNRKRSFIKLICVHCRIKCVTFKEY 489
Query: 302 SKHLLSSKHRAAM 340
+ HL S H+ +M
Sbjct: 490 NYHLNSRSHKNSM 502
>AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA,
isoform A protein.
Length = 919
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEETDKEPDAG---SDALLPRPRSYVNLICVHCKDKSATFAGY 301
S K+ D D+ G++ KE + + R RS++ LICVHC+ K TF Y
Sbjct: 430 STKKERTSRKDKDKESSGDDRSKERRSSRHRDEDHNNRKRSFIKLICVHCRIKCVTFKEY 489
Query: 302 SKHLLSSKHRAAM 340
+ HL S H+ +M
Sbjct: 490 NYHLNSRSHKNSM 502
>BT022951-1|AAY55367.1| 316|Drosophila melanogaster IP11180p
protein.
Length = 316
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 194 DKEPDAGSDALLPRP 238
+KEPD G+D LLPRP
Sbjct: 189 EKEPDHGADLLLPRP 203
>AE014297-90|AAN13316.1| 316|Drosophila melanogaster CG31525-PA
protein.
Length = 316
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 194 DKEPDAGSDALLPRP 238
+KEPD G+D LLPRP
Sbjct: 189 EKEPDHGADLLLPRP 203
>X56689-1|CAA40017.1| 716|Drosophila melanogaster Protein on
Ecdysone Puffs protein.
Length = 716
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RSYVNLICVHCKDKSATFAGYSKHLLSSKH 328
+ +++ C+ C + AT Y HLLS++H
Sbjct: 314 KKFLHPKCIECNKEFATRIDYDTHLLSAEH 343
>BT001867-1|AAN71637.1| 502|Drosophila melanogaster SD02426p
protein.
Length = 502
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RSYVNLICVHCKDKSATFAGYSKHLLSSKH 328
+ +++ C+ C + AT Y HLLS++H
Sbjct: 100 KKFLHPKCIECNKEFATRIDYDTHLLSAEH 129
>AY118552-1|AAM49921.1| 693|Drosophila melanogaster LD34072p
protein.
Length = 693
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RSYVNLICVHCKDKSATFAGYSKHLLSSKH 328
+ +++ C+ C + AT Y HLLS++H
Sbjct: 291 KKFLHPKCIECNKEFATRIDYDTHLLSAEH 320
>AE014296-2942|AAF49317.3| 502|Drosophila melanogaster CG6143-PA,
isoform A protein.
Length = 502
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RSYVNLICVHCKDKSATFAGYSKHLLSSKH 328
+ +++ C+ C + AT Y HLLS++H
Sbjct: 100 KKFLHPKCIECNKEFATRIDYDTHLLSAEH 129
>AE014296-2941|AAS64975.1| 693|Drosophila melanogaster CG6143-PC,
isoform C protein.
Length = 693
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RSYVNLICVHCKDKSATFAGYSKHLLSSKH 328
+ +++ C+ C + AT Y HLLS++H
Sbjct: 291 KKFLHPKCIECNKEFATRIDYDTHLLSAEH 320
>AE014296-2940|AAF49319.3| 716|Drosophila melanogaster CG6143-PB,
isoform B protein.
Length = 716
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 239 RSYVNLICVHCKDKSATFAGYSKHLLSSKH 328
+ +++ C+ C + AT Y HLLS++H
Sbjct: 314 KKFLHPKCIECNKEFATRIDYDTHLLSAEH 343
>X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormone
receptor protein.
Length = 865
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEET--DKEPDAGSDALLP----RPRSYVNLICVHCKDKSATF 292
S ++ E ++ DE EGEE D+E D +ALLP S NL + S+T
Sbjct: 54 SEEEAEEEDNEEDEEEEGEEEEEDEEEDEDEEALLPVVNFNANSDFNLHFFDTPEDSSTQ 113
Query: 293 AGYSK 307
YS+
Sbjct: 114 GAYSE 118
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1
Query: 1 VDPPGCINSARGSNQRKN 54
VDPPGC NSAR QR N
Sbjct: 13 VDPPGCRNSAR-DRQRAN 29
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEET--DKEPDAGSDALLP----RPRSYVNLICVHCKDKSATF 292
S ++ E ++ DE EGEE D+E D +ALLP S NL + S+T
Sbjct: 54 SEEEAEEEDNEEDEEEEGEEEEEDEEEDEDEEALLPVVNFNANSDFNLHFFDTPEDSSTQ 113
Query: 293 AGYSK 307
YS+
Sbjct: 114 GAYSE 118
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEET--DKEPDAGSDALLP----RPRSYVNLICVHCKDKSATF 292
S ++ E ++ DE EGEE D+E D +ALLP S NL + S+T
Sbjct: 54 SEEEAEEEDNEEDEEEEGEEEEEDEEEDEDEEALLPVVNFNANSDFNLHFFDTPEDSSTQ 113
Query: 293 AGYSK 307
YS+
Sbjct: 114 GAYSE 118
>AY069403-1|AAL39548.1| 268|Drosophila melanogaster LD10351p
protein.
Length = 268
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 298 PGEGGAFILAMYTDEINVRTRTWQKCI*TSVRFLVSFFSFYSFI 167
PG ++A Y+ +RT+ CI V L + FSFY+F+
Sbjct: 125 PGFDDELLVAWYSLSDYIRTQASFACITLFVMSLGAVFSFYTFM 168
>AF157066-1|AAD43129.1| 2262|Drosophila melanogaster klarsicht
protein protein.
Length = 2262
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 134 PKQPVVEASDGDEAVEG-EETDKEPDAGSDAL 226
P+ + GDEA E EE D++PD G+D +
Sbjct: 534 PRDCLAPQKPGDEADEELEEEDEDPDIGTDVV 565
>AE014296-105|AAF47389.1| 2262|Drosophila melanogaster CG17046-PA,
isoform A protein.
Length = 2262
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 134 PKQPVVEASDGDEAVEG-EETDKEPDAGSDAL 226
P+ + GDEA E EE D++PD G+D +
Sbjct: 534 PRDCLAPQKPGDEADEELEEEDEDPDIGTDVV 565
>AY075178-1|AAL68048.1| 326|Drosophila melanogaster AT12771p
protein.
Length = 326
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -2
Query: 286 GAFILAMYTDEINVRTRTWQKCI*TSVRFLVSFFSFYSFITV 161
GA ++ + I + R W++ ++R L+S ++FYS + +
Sbjct: 60 GAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVII 101
>AY070710-1|AAL48181.1| 662|Drosophila melanogaster SD02943p
protein.
Length = 662
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEETDKEPDAGSDAL 226
+PK+ + S+GDE + E D++PD + +
Sbjct: 270 NPKEGDSDQSEGDEGDDEPENDQDPDEAASEI 301
>AE014134-2093|AAF53119.1| 326|Drosophila melanogaster CG14936-PA
protein.
Length = 326
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -2
Query: 286 GAFILAMYTDEINVRTRTWQKCI*TSVRFLVSFFSFYSFITV 161
GA ++ + I + R W++ ++R L+S ++FYS + +
Sbjct: 60 GAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVII 101
>AE014134-1532|AAF52688.1| 662|Drosophila melanogaster CG13097-PA
protein.
Length = 662
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 131 SPKQPVVEASDGDEAVEGEETDKEPDAGSDAL 226
+PK+ + S+GDE + E D++PD + +
Sbjct: 270 NPKEGDSDQSEGDEGDDEPENDQDPDEAASEI 301
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,542,678
Number of Sequences: 53049
Number of extensions: 174831
Number of successful extensions: 977
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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