Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I17
(415 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 119 2e-28
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 68 5e-13
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 56 3e-09
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 48 8e-07
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 46 3e-06
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 2e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 38 6e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 6e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 37 0.001
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.001
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 36 0.003
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 35 0.006
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 31 0.094
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 0.87
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 27 0.87
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 1.5
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 3.5
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 25 4.7
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 25 6.1
SPBC16D10.06 |||ZIP zinc transporter 2|Schizosaccharomyces pombe... 25 6.1
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 24 8.1
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 24 8.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 119 bits (287), Expect = 2e-28
Identities = 58/93 (62%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = +3
Query: 51 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAE-DQRYKGIVDAFVRIPKEQG 227
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 228 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 326
++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 38.3 bits (85), Expect = 5e-04
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = +3
Query: 51 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGL 230
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 231 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 335
+RG +V+ + L F D K V L G
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 68.1 bits (159), Expect = 5e-13
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +3
Query: 66 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 245
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 246 GNFANVIRYFPTQALNFAFKDKYKQ 320
GN N +R FP A+ FA + KQ
Sbjct: 78 GNGTNCLRAFPYGAVQFATFNMLKQ 102
Score = 42.7 bits (96), Expect = 2e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 21 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDA 200
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 201 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 296
I K +G+ F+RG +N+++ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 55.6 bits (128), Expect = 3e-09
Identities = 31/103 (30%), Positives = 53/103 (51%)
Frame = +3
Query: 57 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLS 236
K +AGG + V+K+ VAP++RVK+L Q H S + R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 237 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRY 365
++G+ A + R FP + F ++ ++V + + T R+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRF 120
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 47.6 bits (108), Expect = 8e-07
Identities = 25/95 (26%), Positives = 49/95 (51%)
Frame = +3
Query: 39 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPK 218
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 219 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 323
G+ SF+ GN NV++ P ++ F + K+V
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRV 216
Score = 42.3 bits (95), Expect = 3e-05
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +3
Query: 72 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGN 251
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTS---AHPATYDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 252 FANVIRYFPTQALNFAFKDKYKQ 320
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
Score = 38.3 bits (85), Expect = 5e-04
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 63 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVR-IPKEQGLLSF 239
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 240 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 332
+RG ++ FP A + + K+ ++G
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIG 318
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 45.6 bits (103), Expect = 3e-06
Identities = 28/96 (29%), Positives = 53/96 (55%)
Frame = +3
Query: 66 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 245
++GG+S A++ + P++ VK LLQ + S I E ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 246 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQ 353
G ++ P A+++A + K++ + V K +Q
Sbjct: 268 GIRPRMVVAMPATAVSWAAYEAGKEILI-RVSKTSQ 302
Score = 39.1 bits (87), Expect = 3e-04
Identities = 22/94 (23%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 66 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 242
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 243 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 344
RG + ++ P+ A+ F+ + +K D+
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFKSKINASPDR 112
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.9 bits (89), Expect = 2e-04
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +3
Query: 39 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPK 218
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 219 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 326
+G +RG ++ P +AL FA D Y +++
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 34.3 bits (75), Expect = 0.008
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = +3
Query: 54 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLL 233
A L G + V P E +K+ LQ + +Y G VD F +I K++ +L
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQ------DVKNASKYNGTVDCFTKIVKQERIL 158
Query: 234 SFWRGNFANVIRYFPTQALNFAFKDKYK 317
+ + G A + R+ A F K +
Sbjct: 159 ALYNGFEATMWRHVVWNAGYFGVIQKIR 186
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 37.9 bits (84), Expect = 6e-04
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 57 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQR---YKGIVDAFVRIPKEQG 227
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 228 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 344
+ +RG ++ Y P+ ++ F +K K +F GV+K
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNK 103
Score = 27.9 bits (59), Expect = 0.66
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 180 YKGIVDAFVRIPKEQGLLSFWRGNFANV 263
Y DAF +I K +GL +F+RG F ++
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 6e-04
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQ 224
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 225 GLLSFWRG 248
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 34.7 bits (76), Expect = 0.006
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +3
Query: 42 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKE 221
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 222 QGLLSFWRG 248
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.1 bits (82), Expect = 0.001
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +3
Query: 63 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFW 242
FL G ++ ++ PI+ VK +Q SK+ YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQSLSASKE------YKNSIHCAYKILTQDGLLRFW 260
Query: 243 RGNFANVIRYFPTQALNFAFKDKYKQV 323
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.001
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 63 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQR-YKGIVDAFVRIPKEQGLLSF 239
FL+GG++A + T P E +K Q+Q ++ +R YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 240 WRG 248
RG
Sbjct: 87 QRG 89
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 35.5 bits (78), Expect = 0.003
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +3
Query: 66 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 245
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 246 GNFANVIRYFPTQALNFAFKDKYKQV 323
GN + Y A F K K +
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL 95
Score = 28.3 bits (60), Expect = 0.50
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 66 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWR 245
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQTF--------PSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 246 GNFANVIRYFP 278
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.7 bits (76), Expect = 0.006
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Frame = +3
Query: 9 T*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIAEDQ 176
T +N SN P + F+AGG++ + A AP++ VK LQ KQ A+ +
Sbjct: 35 TKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSK 93
Query: 177 -----RYKGIVDAFV---RIPKEQGLLSFWRGNFANVIRYFPTQALNF 296
Y+ +D + + +G + +RG N+I P +++NF
Sbjct: 94 SPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINF 141
Score = 29.5 bits (63), Expect = 0.22
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +3
Query: 75 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNF 254
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 255 ANVIRYFPTQALNF 296
A+++R P + F
Sbjct: 337 AHLLRVVPNACILF 350
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 30.7 bits (66), Expect = 0.094
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Frame = +3
Query: 57 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAEDQRYKGIVDAFVRIPKEQG 227
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 228 LLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKNT 350
+ FW G F + + F AL VF G+D+ T
Sbjct: 227 AVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 0.87
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +3
Query: 66 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSF 239
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 240 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 332
W G + R P A + ++ + LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 27.5 bits (58), Expect = 0.87
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 166 PRTNATRVSSTPSSAFPRSRVCSHSGVVTSP 258
P T A V S P+S+FP + SG ++SP
Sbjct: 310 PPTTAPAVVSPPASSFPLMSSAATSGNISSP 340
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 1.5
Identities = 21/102 (20%), Positives = 39/102 (38%)
Frame = +3
Query: 21 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDA 200
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 201 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 326
F I ++GL + G +I Y + F + +K +
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKY 106
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 3.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 189 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 281
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.0 bits (52), Expect = 4.7
Identities = 21/91 (23%), Positives = 38/91 (41%)
Frame = +3
Query: 54 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLL 233
A F A +S+A+S P++ +K+ Q + + I F K +GL
Sbjct: 18 ASTFSAALVSSAISNVIGYPLDSIKVRQQTYN----------FPTIRSCFQNAVKNEGLK 67
Query: 234 SFWRGNFANVIRYFPTQALNFAFKDKYKQVF 326
+RG +I +++++F D K F
Sbjct: 68 GLYRGLTLPLISATLSRSVSFTVYDSLKLTF 98
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 160 RSPRTNATRVSSTPSSAFPRSRV 228
RSP + R+SS SS P SRV
Sbjct: 168 RSPPASCKRLSSCESSGSPSSRV 190
>SPBC16D10.06 |||ZIP zinc transporter 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 408
Score = 24.6 bits (51), Expect = 6.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 175 WSSAICLLTCW 143
W+ ICL++CW
Sbjct: 141 WAPGICLISCW 151
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 24.2 bits (50), Expect = 8.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 266 QVLPDSGAQLRFQGQVQAG 322
+ LPD +LRF+G+ + G
Sbjct: 211 RTLPDGSCKLRFEGEEEVG 229
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 24.2 bits (50), Expect = 8.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 60 LWRTRLDRRDSTFCSI 13
LW+ R D RD CSI
Sbjct: 492 LWKNRKDFRDKLICSI 507
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.121 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,366,061
Number of Sequences: 5004
Number of extensions: 22122
Number of successful extensions: 108
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 144287194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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