Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I16
(359 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1026 + 30214437-30214937 124 2e-29
02_05_0416 + 28791512-28792012 124 2e-29
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 29 0.83
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 29 1.1
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 29 1.1
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 29 1.5
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873... 29 1.5
08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,443... 28 1.9
07_01_0415 - 3160059-3160445,3160584-3160727,3160903-3160971,316... 28 1.9
05_04_0305 + 20052813-20053996,20055774-20055861,20056470-200565... 28 2.5
04_04_0453 - 25346114-25346214,25346600-25346699,25346901-253469... 27 3.4
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 27 3.4
11_01_0669 - 5454116-5454153,5454569-5454770,5454865-5455029,545... 27 4.4
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424... 27 4.4
04_01_0528 - 6917414-6919849 27 4.4
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 27 5.9
10_01_0190 + 2107854-2108135,2108215-2109272,2110561-2110681 27 5.9
08_02_1556 - 27852247-27852738,27853005-27853197,27854006-278540... 27 5.9
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435... 27 5.9
07_03_0462 + 18444928-18444999,18446948-18447985,18448015-184488... 27 5.9
06_03_0632 - 22949942-22951351 27 5.9
04_04_1551 - 34348110-34348225,34348468-34348606,34348658-343488... 27 5.9
04_01_0530 - 6928528-6929500,6929514-6930964 27 5.9
03_06_0145 - 31973924-31975837 27 5.9
02_02_0310 - 8842286-8843314 26 7.7
>04_04_1026 + 30214437-30214937
Length = 166
Score = 124 bits (300), Expect = 2e-29
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKIT 298
MPPK DP ++ V +R GGEVGAASSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++T
Sbjct: 1 MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 299 VQLIVQNRQAQISVVPSAAA 358
V+L VQNRQA++SVVPSAAA
Sbjct: 61 VKLTVQNRQAKVSVVPSAAA 80
>02_05_0416 + 28791512-28792012
Length = 166
Score = 124 bits (300), Expect = 2e-29
Identities = 59/80 (73%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKIT 298
MPPK DP ++ V +R GGEVGAASSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++T
Sbjct: 1 MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVT 60
Query: 299 VQLIVQNRQAQISVVPSAAA 358
V+L VQNRQA++SVVPSAAA
Sbjct: 61 VKLTVQNRQAKVSVVPSAAA 80
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 29.5 bits (63), Expect = 0.83
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -3
Query: 225 RGPILGAKEDAAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNLDIKGV 46
R P K +P+ P + + S + L +V + NN + ++SKP+ +GV
Sbjct: 80 RAPAPSPKPSPSPSPSP---RRSTSASPSATLSSLVSRTFSNNAASSSSSKPLPSLFRGV 136
Query: 45 QPSKRTKTSAA 13
+PS + + A
Sbjct: 137 RPSPKPGAALA 147
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 258 MSSPTFFGERPR-GPILGAKEDAAPTSPPT 172
MS+P FFG+ P+ P +GA T PPT
Sbjct: 444 MSAPPFFGQLPQVQPQIGATAALGGTQPPT 473
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 222 GPILGAKEDAAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 61
G + + P PP + I+LGS G L ++C+ K ++ + K N+
Sbjct: 386 GSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANI 439
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 222 GPILGAKEDAAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 61
G + + P+ PP + I+LGS G L ++C+ K ++ + K N+
Sbjct: 356 GSVASRLRERPPSEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANI 409
>01_06_1513 -
37884198-37884485,37884966-37886951,37886976-37887305,
37887397-37887471,37887543-37887734,37887922-37888173,
37888248-37888803,37888881-37889088,37889624-37889736,
37890029-37890060,37890545-37890619
Length = 1368
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = -3
Query: 225 RGPILGAKEDAAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNLDIKGV 46
RGP G +E P P+ + L N+ T++ +SLY ++ +KG
Sbjct: 201 RGPF-GQRE--GPLDSPSSSSFSTSPYLDQNISKSRKTSHGARESLYWGARENKQKVKGS 257
Query: 45 QPSKRTKTSAAQPSC 1
P K+T +P C
Sbjct: 258 DPVKKTTHVGDKPRC 272
>08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,
4437721-4437990,4438168-4438605,4438772-4439043,
4439126-4439274,4439339-4439470,4439554-4439880,
4439963-4440357,4440551-4440861,4441304-4441394,
4441806-4441847
Length = 1686
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 222 GPILGAKEDAAPTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 61
G + + P+ PP + I+ GS G L ++CN K ++ + K N+
Sbjct: 1400 GSVASRLRERPPSEPPLDWQTRRRIAAGSARGLSYLHDHCNPKIIHRDVKAANI 1453
Score = 26.2 bits (55), Expect = 7.7
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -3
Query: 312 TINWTVILRPFQSLVALAMSSPTFFGERPRGPILGA-KEDAAPTSPPTHLKLTILISLGS 136
T +W+ R FQ+ V + + + E + G + P+ P + + I+LGS
Sbjct: 946 TADWSRRTRQFQTQVEMPVHRNLY--EDIEHLLSGCYSTERPPSQAPLDWQTRLRIALGS 1003
Query: 135 NLGGIVLTNYCNNKSLYNNSKPMNL 61
G L ++C+ K ++ + + +N+
Sbjct: 1004 ARGLSYLHDHCDPKIIHRDIRAVNI 1028
>07_01_0415 -
3160059-3160445,3160584-3160727,3160903-3160971,
3161072-3161190,3162246-3162321
Length = 264
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 261 AMSSPTFFGERPRGPILGAKEDAAPT----SPPTHLKLTILISLGSNLGGIVLTNYCNNK 94
AM P G+ G L E +APT SP + ++LG ++ V TN+CN++
Sbjct: 18 AMKFPIISGDSDLGKDLKFHESSAPTIAAYSPLQEYQGHFELALGHSM---VCTNFCNSE 74
Query: 93 SLYNNSKP 70
Y P
Sbjct: 75 QSYGVYSP 82
>05_04_0305 +
20052813-20053996,20055774-20055861,20056470-20056522,
20056585-20056615
Length = 451
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 105 CNNKSLYNNSKPMNLDIKGVQPSKRTKTSAAQP 7
C+ K+ + + P+ D+ G+ PS+ +K A+QP
Sbjct: 173 CSPKATFLRTLPVLRDVHGLTPSELSKLVASQP 205
>04_04_0453 -
25346114-25346214,25346600-25346699,25346901-25346962,
25347053-25347186,25347320-25347408,25347667-25347696
Length = 171
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 331 LRLSVLHYQLDRDLETLPVTSGFS 260
L+ S+LHY +++LE L +GFS
Sbjct: 129 LKSSILHYLTEKELEELAKEAGFS 152
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 249 PTFFGERPRGPILGAKEDAAPTSPP 175
P+ FG RPR P AAP PP
Sbjct: 31 PSSFGPRPRPPSPSTSVGAAPQPPP 55
>11_01_0669 -
5454116-5454153,5454569-5454770,5454865-5455029,
5455278-5456183
Length = 436
Score = 27.1 bits (57), Expect = 4.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 134 FDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKV 247
F N +KIV ++C G EV +G G+ +K+
Sbjct: 375 FVSNHLKIVEIKCKGKEVMWVCKFLKTLGTFGIPLEKI 412
>04_04_1574 - 34536744-34537136,34541247-34541405,34541497-34542411,
34543642-34543731,34544324-34544390,34544483-34544676,
34544770-34545510,34545596-34545661,34545783-34545908,
34545978-34546073,34546153-34546521,34546602-34546724,
34546802-34546906,34547394-34547531,34547665-34547760,
34548018-34548275
Length = 1311
Score = 27.1 bits (57), Expect = 4.4
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -1
Query: 269 WL*RCHHQPFLGRDQGDRF*EPKRTQHRLLHQHILS*RF*FH*DQI*AALCLLITVITRV 90
W+ C HQP+ D R P QH L + +S F H DQ+ AL +L + +T
Sbjct: 1183 WMLNCRHQPYREEDGELRIVGPPH-QHAHLKRVRIS-GFFGHKDQVELALHILRSSMTLE 1240
Query: 89 YIII 78
++I
Sbjct: 1241 QMVI 1244
>04_01_0528 - 6917414-6919849
Length = 811
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 171 HLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 61
H L + ++LG + G L CN + ++ + KP N+
Sbjct: 615 HWSLRVQVALGVSRGLFYLHEECNKQIIHCDMKPQNI 651
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 146 EIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 307
E++ V ++ GG V A S L+ + + + +GD A+ W+ L +TV L
Sbjct: 24 ELEDVGIKAAGGAVAALSPLSETLWREKAAAEFLGDVSARLA--WRDLTVTVVL 75
>10_01_0190 + 2107854-2108135,2108215-2109272,2110561-2110681
Length = 486
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 318 FCTINWTVILRPFQSLVALAMSSPTFFGERPRGPILGAK 202
F ++W + P+ S V +A SP+ ++P + G K
Sbjct: 406 FNLVSWESRIPPYTSFVHMARFSPSLAEDKPESHLSGRK 444
>08_02_1556 -
27852247-27852738,27853005-27853197,27854006-27854070,
27854161-27854199,27854572-27854592,27854819-27855052,
27855420-27855504,27855953-27856026,27856516-27856647,
27856735-27856834,27857296-27857361,27857472-27857509,
27858013-27858219,27858378-27858427,27858871-27858940,
27859065-27859133,27859456-27859530,27860456-27860530,
27860887-27860934
Length = 710
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 226 KGTDFRSQRGRSTDFSTNTS*VDD 155
+ TDF SQ +S+DFS + + ++D
Sbjct: 626 RDTDFESQHEKSSDFSVSITAIED 649
>08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,
4351133-4353092,4353465-4353840,4353932-4354326,
4354597-4354765,4355444-4355518,4357699-4357826,
4357988-4358213,4358290-4358417,4358505-4358768
Length = 1520
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 189 PTSPPTHLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNLDI 55
P PP + I+LGS G L ++C+ K ++ + K N+ +
Sbjct: 1063 PYEPPLDWRTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANISL 1107
>07_03_0462 +
18444928-18444999,18446948-18447985,18448015-18448845,
18449112-18449120
Length = 649
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 132 NLILMKLKSST*DVLVEKSVLRPLWLLKSVPLVSPQKRLVMTSLKPLVT 278
NL L LKS D K VL+ LW +K ++ ++RL + ++T
Sbjct: 317 NLALDCLKSEIEDRPQMKEVLKQLWSIKRSEILRQERRLAELRERRIMT 365
>06_03_0632 - 22949942-22951351
Length = 469
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 300 TVILRPFQSLVALAMSSPTFFGERPRGPILGAKEDAA 190
TV++ FQ L A +++ + P GP+L + +DAA
Sbjct: 223 TVLVNVFQELEADTLAAVGAYDVLPIGPVLPSGDDAA 259
>04_04_1551 -
34348110-34348225,34348468-34348606,34348658-34348896,
34349042-34349140,34349207-34350188,34350737-34350832,
34350936-34351064,34351253-34351332,34351420-34351661,
34351743-34352692
Length = 1023
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 161 NLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIA 262
N +C G E G S AP++ PLG+ PK G+ IA
Sbjct: 736 NSKCAGAE-GINS--APRVTPLGIRPKG-GESIA 765
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 171 HLKLTILISLGSNLGGIVLTNYCNNKSLYNNSKPMNL 61
H L + ++LG G + L CN + ++ + KP N+
Sbjct: 611 HWSLRVQVALGVARGLLYLHEECNKQIIHCDMKPQNI 647
>03_06_0145 - 31973924-31975837
Length = 637
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 249 PTFFGERPRGPILGAKEDAAPTSPPTHLK 163
P F + P G ++ A AAP +PP +K
Sbjct: 68 PPLFYDGPLGAVVAAAAAAAPPAPPKFVK 96
>02_02_0310 - 8842286-8843314
Length = 342
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 294 ILRPFQSLVALAMSSPTFFGERPRGPILGAKEDAA 190
I+ P+ A A P P GP++ +DAA
Sbjct: 52 IVPPYLDAAAAARDEPAAAAASPEGPVIPVDDDAA 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,579,128
Number of Sequences: 37544
Number of extensions: 180902
Number of successful extensions: 587
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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