Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I16
(359 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 150 1e-36
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 146 2e-35
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 146 2e-35
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 146 2e-35
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 146 2e-35
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 146 2e-35
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 142 4e-34
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 74 2e-13
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 37 0.016
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 37 0.016
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 37 0.022
BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interactin... 31 0.81
AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting prote... 31 1.1
AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75 pro... 31 1.1
AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein. 31 1.1
AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein. 31 1.1
AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open read... 29 3.3
X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of lamini... 29 5.7
X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of lamini... 29 5.7
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 150 bits (363), Expect = 1e-36
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = +2
Query: 116 STMPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 295
STMPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+I
Sbjct: 31 STMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRI 90
Query: 296 TVQLIVQNRQAQISVVPSAAA 358
TV+L +QNRQAQI VVPSA+A
Sbjct: 91 TVKLTIQNRQAQIEVVPSASA 111
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 146 bits (354), Expect = 2e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLIVQNRQAQISVVPSAAA 358
+L +QNRQAQI VVPSA+A
Sbjct: 61 KLTIQNRQAQIEVVPSASA 79
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 146 bits (354), Expect = 2e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLIVQNRQAQISVVPSAAA 358
+L +QNRQAQI VVPSA+A
Sbjct: 61 KLTIQNRQAQIEVVPSASA 79
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 146 bits (354), Expect = 2e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLIVQNRQAQISVVPSAAA 358
+L +QNRQAQI VVPSA+A
Sbjct: 61 KLTIQNRQAQIEVVPSASA 79
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 146 bits (354), Expect = 2e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLIVQNRQAQISVVPSAAA 358
+L +QNRQAQI VVPSA+A
Sbjct: 61 KLTIQNRQAQIEVVPSASA 79
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 146 bits (354), Expect = 2e-35
Identities = 67/79 (84%), Positives = 73/79 (92%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLIVQNRQAQISVVPSAAA 358
+L +QNRQAQI VVPSA+A
Sbjct: 61 KLTIQNRQAQIEVVPSASA 79
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 142 bits (343), Expect = 4e-34
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 301
MPPKFDPNEIK+V LRC GEVGA S+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 302 QLIVQNRQAQISVVPSAAA 358
+L ++NRQAQI VVPSA+A
Sbjct: 61 KLTIENRQAQIEVVPSASA 79
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 73.7 bits (173), Expect = 2e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +2
Query: 122 MPPKFDPNEIKIVNLRCVGGEVGAASSLAPKIGPLGL 232
MPPKFDPNEIK+V LRC GGEVGA S+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -1
Query: 284 PSSH*WL*RCHHQPFLGRDQGDRF*EPKRTQHRL 183
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -1
Query: 284 PSSH*WL*RCHHQPFLGRDQGDRF*EPKRTQHRL 183
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -1
Query: 284 PSSH*WL*RCHHQPFLGRDQGDRF*EPKRTQHRL 183
PSSH +CHHQPFL D G R P + HRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interacting
protein 5 (class I) protein.
Length = 652
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 EVGAASSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 292
E+G SSL K GP LG SP KA S W GL+
Sbjct: 475 ELGRRSSLGEKGGPILGASPHHSSSGEGKAKSSWFGLR 512
>AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting protein
Rip11a protein.
Length = 653
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 EVGAASSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 292
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75
protein.
Length = 549
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 EVGAASSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 292
E+G SSL K GP LG SP KA S W GL+
Sbjct: 372 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 409
>AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 EVGAASSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 292
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein.
Length = 733
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 EVGAASSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 292
E+G SSL K GP LG SP KA S W GL+
Sbjct: 556 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 593
>AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open reading
frame 127 protein.
Length = 702
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 237 GERPRGPILGAKEDAAPTSPPTHLKLTILISLGSNLGGIVLTNY--CNNKSL 88
GER RGP L + PP L L + LG GG+ LT+Y C+ + L
Sbjct: 50 GERSRGPRLKSGFQL----PPALLLLLLFSVLGPGAGGLFLTDYSTCSPRKL 97
>X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of laminin 5
protein.
Length = 1331
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 177 PTHLKLTILISLGSNLGGIVLTNYCNNK-SLYNNSKPMNLDIKGVQPSKRTK 25
P KL +S G I L + N SLYN K NL+ VQP +R K
Sbjct: 1017 PPDFKLPSRLSFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVQPCRRRK 1068
>X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of laminin 5
protein.
Length = 1238
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 177 PTHLKLTILISLGSNLGGIVLTNYCNNK-SLYNNSKPMNLDIKGVQPSKRTK 25
P KL +S G I L + N SLYN K NL+ VQP +R K
Sbjct: 924 PPDFKLPSRLSFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVQPCRRRK 975
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,486,010
Number of Sequences: 237096
Number of extensions: 959100
Number of successful extensions: 6299
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6299
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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