Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I14
(388 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 59 1e-09
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 53 9e-08
04_03_0439 + 15937934-15938167,15938276-15938476,15938852-159389... 47 6e-06
02_05_1228 + 35086576-35087139,35089125-35089268,35090436-350906... 46 8e-06
04_03_0438 + 15929220-15929453,15929564-15929764,15930874-159310... 46 1e-05
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 45 2e-05
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 44 6e-05
04_03_0447 + 16015043-16015489,16017358-16017530,16017906-160180... 42 2e-04
04_03_0435 + 15902356-15902574,15902680-15902777,15905100-159051... 39 0.002
07_03_1053 - 23600983-23601550,23601947-23602105,23602192-236023... 27 3.9
04_04_1016 - 30139691-30139951,30140066-30140134,30141267-301414... 27 3.9
04_04_1009 - 30078988-30079248,30079363-30079431,30080564-300807... 27 3.9
04_01_0014 - 231228-233179,233522-233714 27 3.9
10_08_0636 + 19478723-19478869,19479984-19480212,19480321-194804... 27 5.2
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 27 5.2
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 27 5.2
02_04_0352 + 22278514-22278721,22278871-22279136,22279228-22279833 27 6.9
09_06_0124 + 21008773-21009522,21009624-21009746 26 9.1
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 59.3 bits (137), Expect = 1e-09
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
M LG TG+RVS V G + +++G + V+ G+++ +T P+YG
Sbjct: 112 MELRELGATGLRVSPVGFGASPLGHVFGDVPRDVARAAVRRALDLGINFFDTSPYYGGTV 171
Query: 290 SERLLGKALK--DVPRDSYYIASKVGRY 367
SE +LG L+ VPRD + +A+K GRY
Sbjct: 172 SESVLGDCLRAAGVPRDRFVVATKCGRY 199
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 52.8 bits (121), Expect = 9e-08
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 125 LGNTGIRVSHVSMGGAAFSNIYGT-YEEAKSINLVK*C*KHGVSYLETGPWYGQGSSERL 301
LG G+ VS + G + +Y E + +V+ + GV++ +T YG ++E L
Sbjct: 11 LGTQGLEVSKLGFGCMGLTGVYNAPVAEEDGVAVVRRAFEAGVTFFDTSDAYGPHTNEVL 70
Query: 302 LGKALKDVPRDSYYIASKVG 361
LGKALK +PR+ +A+K G
Sbjct: 71 LGKALKQLPREKVQVATKFG 90
>04_03_0439 +
15937934-15938167,15938276-15938476,15938852-15938911,
15939896-15939958,15940822-15940848,15941020-15941358
Length = 307
Score = 46.8 bits (106), Expect = 6e-06
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 125 LGNTGIRVSHVSMGGAAFSNIYGTYE-EAKSINLVK*C*KHGVSYLETGPWYGQGSSERL 301
LG+ G+ VS +G S YG + EA + L+ GV++L+T YG ++E L
Sbjct: 16 LGSQGLEVSAQGLGCMGMSAFYGPPKPEADMVALIHHAVAAGVTHLDTSDMYGPHTNELL 75
Query: 302 LGKALKDVPRDSYYIASK 355
LGKAL+ R+ +A+K
Sbjct: 76 LGKALQGGVREKVEVATK 93
>02_05_1228 +
35086576-35087139,35089125-35089268,35090436-35090600,
35090722-35090796,35091468-35091671
Length = 383
Score = 46.4 bits (105), Expect = 8e-06
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGG-AAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
M Y NLG +G+RVS +S G F N +EAK+ L++ C GV++ + Y G
Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDV-KEAKA--LLQACRDAGVNFFDNAEVYANG 57
Query: 287 SSERLLGKALKDV 325
+E ++G+A++D+
Sbjct: 58 RAEEIMGQAMRDL 70
>04_03_0438 +
15929220-15929453,15929564-15929764,15930874-15931046,
15931131-15931233,15931763-15932107
Length = 351
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 125 LGNTGIRVSHVSMGGAAFSNIYGTYE-EAKSINLVK*C*KHGVSYLETGPWYGQGSSERL 301
LG+ G+ VS +G S YG + E + L+ GV+ L+T YG ++E L
Sbjct: 16 LGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMVALIHHAVAAGVTLLDTSDIYGPHTNELL 75
Query: 302 LGKALKDVPRDSYYIASKVG 361
LGKAL+ RD +A+K G
Sbjct: 76 LGKALQGGVRDKVELATKFG 95
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 45.2 bits (102), Expect = 2e-05
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +2
Query: 125 LGNTGIRVSHVSMGGAAFSNIYGTYE-EAKSINLVK*C*KHGVSYLETGPWYGQGSSERL 301
LG+ G+ VS +G S +G + EA + L+ GV+ L+T YG ++E L
Sbjct: 16 LGSQGLEVSAQGLGCMGMSAFHGPSKPEADMVALIHHAVAAGVTLLDTADIYGPHANEAL 75
Query: 302 LGKALK-DVPRDSYYIASKVGRY 367
LGKAL+ RD+ +A+K G++
Sbjct: 76 LGKALQVGSVRDNVALATKFGKF 98
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 43.6 bits (98), Expect = 6e-05
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 131 NTGIRVSHVSMGGAAFSNIYGT-YEEAKSINLVK*C*KHGVSYLETGPWYGQGSSERLLG 307
N + VS + G + Y + ++ ++ + GV++ +T YG ++E LLG
Sbjct: 45 NRPVTVSKLGFGCMGLTGAYNSPLDDDAGAAVIAHAFRRGVTFFDTSDVYGPLANEILLG 104
Query: 308 KALKDVPRDSYYIASKVG 361
KALK +PR+ +A+K G
Sbjct: 105 KALKQLPREQVQVATKFG 122
>04_03_0447 +
16015043-16015489,16017358-16017530,16017906-16018008,
16018177-16018521
Length = 355
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 125 LGNTGIRVSHVSMGGAAFSNIYGTYE-EAKSINLVK*C*KHGVSYLETGPWYGQGSSERL 301
LG+ G+ VS +G S +YG + EA + LV+ GV++L+T YG ++E L
Sbjct: 19 LGSQGMEVSAQGLGCMGMSAVYGERKPEADMVALVRHAVAAGVTFLDTSDVYGPHTNEVL 78
Query: 302 LGKAL 316
+GKA+
Sbjct: 79 VGKAV 83
>04_03_0435 +
15902356-15902574,15902680-15902777,15905100-15905163,
15906707-15907045
Length = 239
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 125 LGNTGIRVSHVSMGGAAFSNIYGTYE-EAKSINLVK*C*KHGVSYLETGPWYGQGSSERL 301
LG+ G+ VS +G + + EA + L++ GV++ +T YG ++E L
Sbjct: 11 LGSQGMEVSAQGLGCMGMCPAFEPPKPEADMVALIRHAIAAGVTFFDTSDLYGPHTNEVL 70
Query: 302 LGKALK-DVPRDSYYIASKVGRY 367
LGKAL+ RD +A+K G++
Sbjct: 71 LGKALQGGGVRDRVELATKFGKF 93
>07_03_1053 -
23600983-23601550,23601947-23602105,23602192-23602357,
23602959-23603502,23604506-23604679,23605740-23605985
Length = 618
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 113 IYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKS 214
+Y+N+G + + +M G A SNIYG+ EE S
Sbjct: 559 VYSNMGLPAMAMP--TMAGNAASNIYGSREEKPS 590
>04_04_1016 -
30139691-30139951,30140066-30140134,30141267-30141470,
30141552-30141808,30141899-30141983,30142080-30142164,
30142269-30142795
Length = 495
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 245 GVSYLETGPWYGQGSSERLLGKALKDVPRDSYYIASKVGR 364
G + PW G S LLG A + D Y+ + GR
Sbjct: 74 GTAAAAAPPWGGNPGSNTLLGDAATVICLDDYHSLDRAGR 113
>04_04_1009 -
30078988-30079248,30079363-30079431,30080564-30080767,
30080849-30081105,30081196-30081280,30081377-30081461,
30081566-30082092
Length = 495
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 245 GVSYLETGPWYGQGSSERLLGKALKDVPRDSYYIASKVGR 364
G + PW G S LLG A + D Y+ + GR
Sbjct: 74 GTAAAAAPPWGGNPGSNTLLGDAATVICLDDYHSLDRAGR 113
>04_01_0014 - 231228-233179,233522-233714
Length = 714
Score = 27.5 bits (58), Expect = 3.9
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = +1
Query: 220 SGEIMLETWRKLSRNWPVVWSR 285
SG+IML W + +++W +++++
Sbjct: 180 SGQIMLNVWSEANQSWQIIYAQ 201
>10_08_0636 +
19478723-19478869,19479984-19480212,19480321-19480414,
19480598-19480721,19480922-19481023,19481103-19481254,
19481353-19481446,19481642-19481827
Length = 375
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = +2
Query: 239 KHGVSYLETGPWYG----QGSSERLLGKALKD 322
K+G++ +T YG G SERLLGK +++
Sbjct: 92 KNGINLFDTADSYGTGRLNGQSERLLGKFIRE 123
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 353 CSLCNKSLSGRLSGPSQEVAQSSLDHTTGQFRDSLRHVSSI 231
C+L ++ SGR+ GPS+E+ ++ R+ +V I
Sbjct: 555 CNLDGQNTSGRIEGPSEEIPPNANGMDIDSDREETYNVEGI 595
>03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -3
Query: 386 CSVRAYRSAPLCSLCNKSLSGRLSGPSQEVAQSSLDHTTGQFRDSLRHVSSIIS 225
CS+ R++ L + S+ G+L GPSQ +S Q S+R +SSI++
Sbjct: 1425 CSIFWLRNSEDMDLPS-SVKGKLGGPSQRRLPTSTTSLVLQAIWSMRSISSIVT 1477
>02_04_0352 + 22278514-22278721,22278871-22279136,22279228-22279833
Length = 359
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 344 CNKSLSGRLSGPSQEVAQSSLDHTTGQFRDSLR 246
CNK RLSG SQ+ +S + G+ S R
Sbjct: 313 CNKGERERLSGASQDTGLTSSEVNPGEISSSSR 345
>09_06_0124 + 21008773-21009522,21009624-21009746
Length = 290
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 202 FVSTVYITEGCTSHADMGHSNPSIT 128
F +T+++ CT GH NP++T
Sbjct: 89 FGATIFVLVYCTGGVSGGHINPAVT 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,270,186
Number of Sequences: 37544
Number of extensions: 174814
Number of successful extensions: 477
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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