Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I14
(388 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC099634-1|AAH99634.1| 404|Homo sapiens potassium voltage-gated... 46 3e-05
BC096234-1|AAH96234.1| 404|Homo sapiens potassium voltage-gated... 46 3e-05
BC096232-1|AAH96232.1| 404|Homo sapiens potassium voltage-gated... 46 3e-05
AF016411-1|AAB92499.1| 404|Homo sapiens KCNA3.1B protein. 46 4e-05
CR542287-1|CAG47082.1| 353|Homo sapiens KCNAB2 protein. 39 0.006
CR542264-1|CAG47060.1| 353|Homo sapiens KCNAB2 protein. 39 0.006
AL035406-5|CAI19887.1| 254|Homo sapiens potassium voltage-gated... 39 0.006
AL035406-3|CAI19885.1| 353|Homo sapiens potassium voltage-gated... 39 0.006
AF044253-1|AAB99859.1| 353|Homo sapiens potassium channel beta ... 39 0.006
AL035406-7|CAI19888.1| 95|Homo sapiens potassium voltage-gated... 38 0.011
U16953-1|AAC50122.1| 408|Homo sapiens potassium channel beta3 s... 38 0.015
L39833-1|AAC37573.1| 408|Homo sapiens K+ channel beta-subunit p... 38 0.015
X83127-1|CAA58208.1| 401|Homo sapiens voltage gated potassium c... 37 0.026
U33428-1|AAC50953.1| 401|Homo sapiens K+ channel beta 1a subuni... 37 0.026
BC043166-1|AAH43166.1| 401|Homo sapiens potassium voltage-gated... 37 0.026
AY780786-1|AAV98356.1| 372|Homo sapiens potassium voltage-gated... 37 0.026
AK131252-1|BAD18431.1| 415|Homo sapiens protein ( Homo sapiens ... 37 0.026
U33429-1|AAC50955.1| 367|Homo sapiens K+ channel beta 2 subunit... 36 0.046
BC130413-1|AAI30414.1| 367|Homo sapiens potassium voltage-gated... 36 0.046
BC126424-1|AAI26425.1| 367|Homo sapiens potassium voltage-gated... 36 0.046
BC110351-1|AAI10352.1| 395|Homo sapiens KCNAB2 protein protein. 36 0.046
AL035406-6|CAI19886.1| 253|Homo sapiens potassium voltage-gated... 36 0.046
AL035406-4|CAC08512.1| 367|Homo sapiens potassium voltage-gated... 36 0.046
AF029749-1|AAB84170.1| 367|Homo sapiens potassium channel beta ... 36 0.046
AL035406-2|CAI19884.1| 173|Homo sapiens potassium voltage-gated... 35 0.080
L47665-1|AAC41926.1| 419|Homo sapiens K+ channel beta-subunit p... 35 0.11
U17968-1|AAC50113.1| 133|Homo sapiens voltage-gated potassium c... 29 4.0
BC035127-1|AAH35127.1| 277|Homo sapiens ARHGEF1 protein protein. 28 9.1
>BC099634-1|AAH99634.1| 404|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 3
protein.
Length = 404
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + E A+ + V +HGV+ +T Y
Sbjct: 76 TGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTV--AYEHGVNLFDTAEVYAA 133
Query: 284 GSSERLLGKALKDV--PRDSYYIASKV 358
G +ER LG LK R SY I +K+
Sbjct: 134 GKAERTLGNILKSKGWRRSSYVITTKI 160
>BC096234-1|AAH96234.1| 404|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 3
protein.
Length = 404
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + E A+ + V +HGV+ +T Y
Sbjct: 76 TGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTV--AYEHGVNLFDTAEVYAA 133
Query: 284 GSSERLLGKALKDV--PRDSYYIASKV 358
G +ER LG LK R SY I +K+
Sbjct: 134 GKAERTLGNILKSKGWRRSSYVITTKI 160
>BC096232-1|AAH96232.1| 404|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 3
protein.
Length = 404
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + E A+ + V +HGV+ +T Y
Sbjct: 76 TGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTV--AYEHGVNLFDTAEVYAA 133
Query: 284 GSSERLLGKALKDV--PRDSYYIASKV 358
G +ER LG LK R SY I +K+
Sbjct: 134 GKAERTLGNILKSKGWRRSSYVITTKI 160
>AF016411-1|AAB92499.1| 404|Homo sapiens KCNA3.1B protein.
Length = 404
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG G+RVS + +G + E A+ + V +HGV+ +T Y
Sbjct: 76 TGMKYRNLGKCGVRVSCLGLGTWVTFGSQISDETAEDVLTV--AYEHGVNLFDTAEVYAA 133
Query: 284 GSSERLLGKALKDV--PRDSYYIASKV 358
G +ER LG LK R SY I +K+
Sbjct: 134 GKAERTLGNILKSKGWRRSSYVITTKI 160
>CR542287-1|CAG47082.1| 353|Homo sapiens KCNAB2 protein.
Length = 353
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
MIY NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 23 MIYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGK 80
Query: 290 SERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 81 AEVVLGNIIKKKGWRRSSLVITTKI 105
>CR542264-1|CAG47060.1| 353|Homo sapiens KCNAB2 protein.
Length = 353
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
MIY NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 23 MIYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGK 80
Query: 290 SERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 81 AEVVLGNIIKKKGWRRSSLVITTKI 105
>AL035406-5|CAI19887.1| 254|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 254
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
MIY NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 23 MIYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGK 80
Query: 290 SERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 81 AEVVLGNIIKKKGWRRSSLVITTKI 105
>AL035406-3|CAI19885.1| 353|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 353
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
MIY NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 23 MIYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGK 80
Query: 290 SERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 81 AEVVLGNIIKKKGWRRSSLVITTKI 105
>AF044253-1|AAB99859.1| 353|Homo sapiens potassium channel beta 2
subunit protein.
Length = 353
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
MIY NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 23 MIYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGK 80
Query: 290 SERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 81 AEVVLGNIIKKKGWRRSSLVITTKI 105
>AL035406-7|CAI19888.1| 95|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 95
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 110 MIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQGS 289
MIY NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 23 MIYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGK 80
Query: 290 SERLLGKALK 319
+E +LG +K
Sbjct: 81 AEVVLGNIIK 90
>U16953-1|AAC50122.1| 408|Homo sapiens potassium channel beta3
subunit protein.
Length = 408
Score = 37.5 bits (83), Expect = 0.015
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 76 TGMAYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 133
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 134 GKAEVILGSIIK 145
>L39833-1|AAC37573.1| 408|Homo sapiens K+ channel beta-subunit
protein.
Length = 408
Score = 37.5 bits (83), Expect = 0.015
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 76 TGMAYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 133
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 134 GKAEVILGSIIK 145
>X83127-1|CAA58208.1| 401|Homo sapiens voltage gated potassium
channels, beta subunit protein.
Length = 401
Score = 36.7 bits (81), Expect = 0.026
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 69 TGMKYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 126
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 127 GKAEVILGSIIK 138
>U33428-1|AAC50953.1| 401|Homo sapiens K+ channel beta 1a subunit
protein.
Length = 401
Score = 36.7 bits (81), Expect = 0.026
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 69 TGMKYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 126
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 127 GKAEVILGSIIK 138
>BC043166-1|AAH43166.1| 401|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 1
protein.
Length = 401
Score = 36.7 bits (81), Expect = 0.026
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 69 TGMKYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 126
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 127 GKAEVILGSIIK 138
>AY780786-1|AAV98356.1| 372|Homo sapiens potassium voltage-gated
channel beta subunit protein.
Length = 372
Score = 36.7 bits (81), Expect = 0.026
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 69 TGMKYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 126
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 127 GKAEVILGSIIK 138
>AK131252-1|BAD18431.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ16180 fis, clone BRHIP3000240, highly similar
to Homo sapiens potassium channel beta 2 subunit
(HKvbeta2.2) mRNA. ).
Length = 415
Score = 36.7 bits (81), Expect = 0.026
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ +G++ +T Y
Sbjct: 68 TGMKYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAA 125
Query: 284 GSSERLLGKALKDV--PRDSYYIASKV 358
G +E +LG +K R S I +K+
Sbjct: 126 GKAEVVLGNIIKKKGWRRSSLVITTKI 152
>U33429-1|AAC50955.1| 367|Homo sapiens K+ channel beta 2 subunit
protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>BC130413-1|AAI30414.1| 367|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>BC126424-1|AAI26425.1| 367|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>BC110351-1|AAI10352.1| 395|Homo sapiens KCNAB2 protein protein.
Length = 395
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>AL035406-6|CAI19886.1| 253|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 253
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>AL035406-4|CAC08512.1| 367|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>AF029749-1|AAB84170.1| 367|Homo sapiens potassium channel beta 2
subunit protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALKDV--PRDSYYIASKV 358
+E +LG +K R S I +K+
Sbjct: 94 KAEVVLGNIIKKKGWRRSSLVITTKI 119
>AL035406-2|CAI19884.1| 173|Homo sapiens potassium voltage-gated
channel, shaker-related subfamily, beta member 2
protein.
Length = 173
Score = 35.1 bits (77), Expect = 0.080
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 107 MMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQG 286
+ Y NLG +G+RVS + +G + G + + L+ +G++ +T Y G
Sbjct: 36 LQFYRNLGKSGLRVSCLGLG--TWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAG 93
Query: 287 SSERLLGKALK 319
+E +LG +K
Sbjct: 94 KAEVVLGNIIK 104
>L47665-1|AAC41926.1| 419|Homo sapiens K+ channel beta-subunit
protein.
Length = 419
Score = 34.7 bits (76), Expect = 0.11
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M + NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 87 TGMPHRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 144
Query: 284 GSSERLLGKALK 319
G +E +LG +K
Sbjct: 145 GKAEVILGSIIK 156
>U17968-1|AAC50113.1| 133|Homo sapiens voltage-gated potassium
channel beta subunit protein.
Length = 133
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 104 TMMIYNNLGNTGIRVSHVSMGGAAFSNIYGTYEEAKSINLVK*C*KHGVSYLETGPWYGQ 283
T M Y NLG +G+RVS + +G + G + + L+ + GV+ +T Y
Sbjct: 73 TGMAYRNLGKSGLRVSCLGLG--TWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA 130
Query: 284 GSS 292
G +
Sbjct: 131 GKA 133
>BC035127-1|AAH35127.1| 277|Homo sapiens ARHGEF1 protein protein.
Length = 277
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 280 SREL*ATSWEGPERRPERLLLHSEQSG 360
S+ L A SW+GP P + +HS + G
Sbjct: 11 SKRLKAASWDGPSWGPNKASVHSPEPG 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,811,450
Number of Sequences: 237096
Number of extensions: 968040
Number of successful extensions: 2778
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2778
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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