Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I12
         (389 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U74488-1|AAB40125.1|  736|Drosophila melanogaster Barren protein.      36   0.025
BT011474-1|AAR99132.1|  735|Drosophila melanogaster RE15383p pro...    36   0.025
BT011446-1|AAR99104.1|  735|Drosophila melanogaster RE48802p pro...    36   0.025
AE014134-3190|AAN11061.1|  735|Drosophila melanogaster CG10726-P...    36   0.025
AE014134-3189|AAF53866.1|  735|Drosophila melanogaster CG10726-P...    36   0.025
AE014296-950|AAF50783.1|  216|Drosophila melanogaster CG4780-PA ...    31   0.40 
AY119259-1|AAM51119.1|  216|Drosophila melanogaster SD22572p pro...    30   0.93 
AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin prot...    27   8.7  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    27   8.7  

>U74488-1|AAB40125.1|  736|Drosophila melanogaster Barren protein.
          Length = 736

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 10  RLEYSYS--GAIVTAWAGPSHWKLKNNR 87
           +LEYSY     I   WAGPSHWK K  R
Sbjct: 404 KLEYSYRPMDQISQFWAGPSHWKFKRTR 431


>BT011474-1|AAR99132.1|  735|Drosophila melanogaster RE15383p
           protein.
          Length = 735

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 10  RLEYSYS--GAIVTAWAGPSHWKLKNNR 87
           +LEYSY     I   WAGPSHWK K  R
Sbjct: 403 KLEYSYRPMDQISQFWAGPSHWKFKRTR 430


>BT011446-1|AAR99104.1|  735|Drosophila melanogaster RE48802p
           protein.
          Length = 735

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 10  RLEYSYS--GAIVTAWAGPSHWKLKNNR 87
           +LEYSY     I   WAGPSHWK K  R
Sbjct: 403 KLEYSYRPMDQISQFWAGPSHWKFKRTR 430


>AE014134-3190|AAN11061.1|  735|Drosophila melanogaster CG10726-PB,
           isoform B protein.
          Length = 735

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 10  RLEYSYS--GAIVTAWAGPSHWKLKNNR 87
           +LEYSY     I   WAGPSHWK K  R
Sbjct: 403 KLEYSYRPMDQISQFWAGPSHWKFKRTR 430


>AE014134-3189|AAF53866.1|  735|Drosophila melanogaster CG10726-PA,
           isoform A protein.
          Length = 735

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 10  RLEYSYS--GAIVTAWAGPSHWKLKNNR 87
           +LEYSY     I   WAGPSHWK K  R
Sbjct: 403 KLEYSYRPMDQISQFWAGPSHWKFKRTR 430


>AE014296-950|AAF50783.1|  216|Drosophila melanogaster CG4780-PA
           protein.
          Length = 216

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 76  KNNRSSKMSERDQLPGARLTMDARRPARTKRQLDF 180
           +  R  ++SER+QL   R T ++ +P  T+ QLD+
Sbjct: 91  RQRRMQEISEREQLLNHRFTANSAQPEETRLQLDY 125


>AY119259-1|AAM51119.1|  216|Drosophila melanogaster SD22572p
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 0.93
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 76  KNNRSSKMSERDQLPGARLTMDARRPARTKRQLD 177
           +  R  ++SER+QL   R T ++ +P  T+ QLD
Sbjct: 91  RQRRMQEISEREQLLNHRFTANSAQPEETRLQLD 124


>AF495912-1|AAN60444.1| 2576|Drosophila melanogaster nesprin protein.
          Length = 2576

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 76   KNNRSSKMSERDQLPGARLTMDARRPARTKRQLDFTGAGLAFYCRAEPAGEYEPTQPAKI 255
            K++   K+ ER     A+L  +    +   RQL+   A LA     EP    + T P K+
Sbjct: 1882 KSHSKHKLEERQMELRAKLE-ELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKV 1940

Query: 256  MIS 264
            M+S
Sbjct: 1941 MVS 1943


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
             isoform D protein.
          Length = 11707

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 76    KNNRSSKMSERDQLPGARLTMDARRPARTKRQLDFTGAGLAFYCRAEPAGEYEPTQPAKI 255
             K++   K+ ER     A+L  +    +   RQL+   A LA     EP    + T P K+
Sbjct: 11013 KSHSKHKLEERQMELRAKLE-ELESQSVNLRQLEQIYAKLAMSAGVEPENIQKLTLPTKV 11071

Query: 256   MIS 264
             M+S
Sbjct: 11072 MVS 11074


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,465,354
Number of Sequences: 53049
Number of extensions: 337886
Number of successful extensions: 1068
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)