Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I07
         (372 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            33   0.003
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            30   0.024
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   3.7  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    22   6.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   8.5  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 33.5 bits (73), Expect = 0.003
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
 Frame = +3

Query: 162  SEIEKQFVEIKKQVQE-NFFPDN------VKKQFNNMVDDFNKFMSSMNPN 293
            S+I+KQF ++K+ VQE     DN      +   F ++ +DFN F+S++NP+
Sbjct: 3199 SQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIKEDFNVFLSTVNPS 3249


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 30.3 bits (65), Expect = 0.024
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
 Frame = +3

Query: 162  SEIEKQFVEIKKQVQE-NFFPDN------VKKQFNNMVDDFNKFMSSMN 287
            S+I+KQF ++K+ VQE     DN      +   F ++ +DFN F+S++N
Sbjct: 3196 SQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIEEDFNVFLSTVN 3244


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 84  FLAVCFISVHAFVKRDAEAASTGNAF 161
           F+  C  S  AFVKR+ +A    ++F
Sbjct: 350 FIGNCISSYSAFVKRERDANGFPSSF 375


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 139 ASASRFTKA*TLIKQTARNIIKCLFILKSLPTTFLMSS*TSCXI 8
           ASA R   A   + Q    ++KC+ +L +   + LM    +C +
Sbjct: 236 ASAERTASAIRNVGQMHSGLLKCIRLLNTSIRSMLMLQWLTCVL 279


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 205  CTCFLISTNCFSISLNALP 149
            C  F IST CF   L  LP
Sbjct: 1028 CFDFDISTQCFKERLRLLP 1046


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,407
Number of Sequences: 2352
Number of extensions: 4748
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)