Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_I03
(224 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 38 1e-05
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 38 1e-05
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 22 1.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 1.9
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 19 5.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 19 7.5
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 19 7.5
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 19 7.5
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 19 9.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 9.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 9.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 9.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 19 9.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 19 9.9
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 19 9.9
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 38.3 bits (85), Expect = 1e-05
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 168 GKSTTTGHLIYKFCGIDKR 224
GKSTTTGHLIYK GIDKR
Sbjct: 19 GKSTTTGHLIYKCGGIDKR 37
Score = 35.1 bits (77), Expect = 1e-04
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 113 MGKEKVHINIVVIGH 157
MGKEK+HINIVVIGH
Sbjct: 1 MGKEKIHINIVVIGH 15
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 38.3 bits (85), Expect = 1e-05
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 168 GKSTTTGHLIYKFCGIDKR 224
GKSTTTGHLIYK GIDKR
Sbjct: 19 GKSTTTGHLIYKCGGIDKR 37
Score = 35.1 bits (77), Expect = 1e-04
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 113 MGKEKVHINIVVIGH 157
MGKEK+HINIVVIGH
Sbjct: 1 MGKEKIHINIVVIGH 15
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.8 bits (44), Expect = 1.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 168 GKSTTTGHLIYKFCGIDKR 224
G T+ H+I CGID +
Sbjct: 270 GLDTSKVHIIDSICGIDSK 288
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 1.9
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +1
Query: 142 CR-HRTPSTPASPQQL 186
CR H +P+T A+P QL
Sbjct: 442 CRIHGSPATTAAPPQL 457
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 19.4 bits (38), Expect = 5.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 200 VDQVTSCCGLAGVDGVR 150
+ QV +C G V+G R
Sbjct: 242 ISQVIACVGQQNVEGKR 258
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 19.0 bits (37), Expect = 7.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 126 FSLPIFG 106
FSLPIFG
Sbjct: 57 FSLPIFG 63
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 1 WHEVYLGY 24
W EVY GY
Sbjct: 434 WEEVYNGY 441
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +1
Query: 1 WHEVYLGY 24
W EVY GY
Sbjct: 434 WEEVYNGY 441
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 18.6 bits (36), Expect = 9.9
Identities = 4/17 (23%), Positives = 12/17 (70%)
Frame = +2
Query: 128 VHINIVVIGHRRLRQVH 178
+H+ V++ HR + +++
Sbjct: 664 IHVKEVLVHHREMEELN 680
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 201 CRSSDQLLWTCR 166
CR +DQ+L+ R
Sbjct: 276 CRKTDQILYFIR 287
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 201 CRSSDQLLWTCR 166
CR +DQ+L+ R
Sbjct: 314 CRKTDQILYFIR 325
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 198 RSSDQLLWTCRSR 160
R SDQ +TC +R
Sbjct: 552 RMSDQATYTCVAR 564
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 18.6 bits (36), Expect = 9.9
Identities = 4/17 (23%), Positives = 12/17 (70%)
Frame = +2
Query: 128 VHINIVVIGHRRLRQVH 178
+H+ V++ HR + +++
Sbjct: 664 IHVKEVLVHHREMEELN 680
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 181 VVDLPESTVSDDDNVN 134
+VD P DDD V+
Sbjct: 683 LVDAPADQEGDDDQVD 698
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 187 PVVVDLP 167
PVVVDLP
Sbjct: 347 PVVVDLP 353
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,935
Number of Sequences: 438
Number of extensions: 933
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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