Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I01
         (195 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89601-1|CAA61760.1|  665|Drosophila melanogaster CNG channel pr...    28   2.1  
AE013599-2229|AAF58033.1|  665|Drosophila melanogaster CG7779-PA...    28   2.1  
AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p pro...    26   8.4  
AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA...    26   8.4  

>X89601-1|CAA61760.1|  665|Drosophila melanogaster CNG channel
           protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 15  CRISARGLVPIRQRDCGYRVIIYFEIIILNKRYRLKL*VKMGEVQAGQYIYSFIWAGITV 194
           C++    LV I    C Y  I Y EI   +  +   L          QYIYSF W+ +T+
Sbjct: 252 CKVVLAILVLIHWNACMYFAISY-EIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTL 310


>AE013599-2229|AAF58033.1|  665|Drosophila melanogaster CG7779-PA
           protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +3

Query: 15  CRISARGLVPIRQRDCGYRVIIYFEIIILNKRYRLKL*VKMGEVQAGQYIYSFIWAGITV 194
           C++    LV I    C Y  I Y EI   +  +   L          QYIYSF W+ +T+
Sbjct: 252 CKVVLAILVLIHWNACMYFAISY-EIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTL 310


>AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p
           protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 77  NYSITTIPLPNRHEASCRNPAARGI 3
           NY  T  PL NRH  S   P   GI
Sbjct: 491 NYQHTWSPLSNRHSFSMPQPPGAGI 515


>AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA
           protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -2

Query: 77  NYSITTIPLPNRHEASCRNPAARGI 3
           NY  T  PL NRH  S   P   GI
Sbjct: 491 NYQHTWSPLSNRHSFSMPQPPGAGI 515


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,371,924
Number of Sequences: 53049
Number of extensions: 148579
Number of successful extensions: 224
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 24,988,368
effective HSP length: 44
effective length of database: 22,654,212
effective search space used: 453084240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)