Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_I01
         (195 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical...    26   4.3  
AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical ...    25   5.6  
Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    25   7.4  
AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical ...    25   7.4  
AF016683-3|AAB66193.1|  497|Caenorhabditis elegans Hypothetical ...    25   7.4  
AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical ...    25   7.4  
AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical ...    25   7.4  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    25   9.8  

>AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical
           protein K02E7.3 protein.
          Length = 805

 Score = 25.8 bits (54), Expect = 4.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 266 HFESSFDGIKVHKNGNHNIWPYSLLNLDLEDVHRAS 301


>AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical
           protein C17B7.7 protein.
          Length = 805

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 266 HFESSFDRIKVHKNGNQNIWPYSLLNLDLEDVHRAS 301


>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 266 HFESSFDGIKVHKNGNQNIWPYSLLNLDLEDVHRAS 301


>AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical
           protein W03G1.4 protein.
          Length = 805

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 266 HFESSFDGIKVHKNGNQNIWPYSLLNLDLEDVHRAS 301


>AF016683-3|AAB66193.1|  497|Caenorhabditis elegans Hypothetical
           protein K09F6.2 protein.
          Length = 497

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 252 HFESSFDGIKVHKNGNQNIWPYSLLNLDLEDVHRAS 287


>AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical
           protein R09E12.6 protein.
          Length = 805

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 266 HFESSFDGIKVHKNGNQNIWPYSLLNLDLEDVHRAS 301


>AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical
           protein Y55F3C.6 protein.
          Length = 805

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 137 HFHL*FQTISLI*NNNFKVYNYSITTIPLPNRHEAS 30
           HF   F  I +  N N  ++ YS+  + L + H AS
Sbjct: 266 HFESSFDGIKVHKNGNQNIWPYSLLNLDLEDVHRAS 301


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
           protein Y38C9A.1 protein.
          Length = 1484

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 11  ALQDFGTRPRADSAEGLWLSSNY 79
           ++ D   + R DS + LW S+NY
Sbjct: 199 SIDDLQKKKRIDSVKQLWKSNNY 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,837,950
Number of Sequences: 27780
Number of extensions: 79174
Number of successful extensions: 131
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 12,740,198
effective HSP length: 44
effective length of database: 11,517,878
effective search space used: 230357560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)