Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_H24
         (99 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ...    63   5e-12
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...    63   5e-12
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p...    63   5e-12
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc...    60   3e-11
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...    59   7e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch...    36   7e-04
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom...    33   0.004
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p...    25   1.8  
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar...    24   2.3  

>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 644

 Score = 62.9 bits (146), Expect = 5e-12
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
           PAYFNDSQ  ATKDAG I+GLNVLRIINEPTAA
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAA 177


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score = 62.9 bits (146), Expect = 5e-12
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
           PAYFND+Q  ATKDAGTI+GLNV+RI+NEPTAA
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAA 210


>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 647

 Score = 62.9 bits (146), Expect = 5e-12
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
           PAYFNDSQ  ATKDAG I+GLNVLRIINEPTAA
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAA 177


>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score = 60.5 bits (140), Expect = 3e-11
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
           PAYF+DSQ  ATKDAG I+GLNVLRIINEPTAA
Sbjct: 149 PAYFSDSQRAATKDAGAIAGLNVLRIINEPTAA 181


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score = 59.3 bits (137), Expect = 7e-11
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
           PAYFNDSQ  ATK AG I+GLNVLR++NEPTAA
Sbjct: 191 PAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAA 223


>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
           Pss1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 720

 Score = 35.9 bits (79), Expect = 7e-04
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
           PA+F D Q  A  +A  I+GLN LR++N+  AA
Sbjct: 149 PAWFTDIQRRALLEAANIAGLNPLRLMNDNAAA 181


>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 566

 Score = 33.5 bits (73), Expect = 0.004
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   PAYFNDSQMHATKDAGTISGLNVLRIINEPTA 96
           P YF D+Q  A + A   +GL VL++I++P A
Sbjct: 171 PVYFTDAQRKALESAANEAGLPVLQLIHDPAA 202


>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 669

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 48  YHLWSECSSYY 80
           YHLW +C+ Y+
Sbjct: 377 YHLWKDCNPYF 387


>SPBC19C7.08c |||leucine carboxyl
          methyltransferase|Schizosaccharomyces pombe|chr
          2|||Manual
          Length = 681

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 18 LSNACHERCGYHLWSECSSYYQ 83
          LS A  E+CGY  ++   SYYQ
Sbjct: 25 LSKASVEKCGYPGFTVGHSYYQ 46


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.314    0.128    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,733
Number of Sequences: 5004
Number of extensions: 3552
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 2,362,478
effective HSP length: 14
effective length of database: 2,292,422
effective search space used: 41263596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)