Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H24
(99 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 64 2e-11
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 64 2e-11
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 63 2e-11
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 63 3e-11
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 63 3e-11
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 62 7e-11
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 61 9e-11
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-10
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-10
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 60 2e-10
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 50 3e-07
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 50 3e-07
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 36 0.004
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 35 0.007
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 32 0.047
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 63.7 bits (148), Expect = 2e-11
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFNDSQ ATKDAG ISGLNVLR+INEPTAA
Sbjct: 172 PAYFNDSQRQATKDAGQISGLNVLRVINEPTAA 204
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 63.7 bits (148), Expect = 2e-11
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFNDSQ ATKDAG ISGLNVLR+INEPTAA
Sbjct: 172 PAYFNDSQRQATKDAGQISGLNVLRVINEPTAA 204
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 63.3 bits (147), Expect = 2e-11
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFNDSQ ATKDAG I+GLNVLRIINEPTAA
Sbjct: 148 PAYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 62.9 bits (146), Expect = 3e-11
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFND+Q ATKDAGTI+GLNV+RIINEPTAA
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVVRIINEPTAA 210
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 62.9 bits (146), Expect = 3e-11
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFND+Q ATKDAGTI+GLNV+RIINEPTAA
Sbjct: 178 PAYFNDAQRQATKDAGTIAGLNVVRIINEPTAA 210
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 61.7 bits (143), Expect = 7e-11
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
P YFNDSQ ATKDAG I+GLNVLRIINEPTAA
Sbjct: 148 PTYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 61.3 bits (142), Expect = 9e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFND+Q ATKDAG+I+GLNV+RIINEPTAA
Sbjct: 175 PAYFNDAQKQATKDAGSIAGLNVVRIINEPTAA 207
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 60.5 bits (140), Expect = 2e-10
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFNDSQ ATKDA TI+GLN +RIINEPTAA
Sbjct: 147 PAYFNDSQRQATKDAATIAGLNAIRIINEPTAA 179
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 60.5 bits (140), Expect = 2e-10
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFNDSQ ATKDA TI+GLN +RIINEPTAA
Sbjct: 147 PAYFNDSQRQATKDAATIAGLNAIRIINEPTAA 179
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 60.5 bits (140), Expect = 2e-10
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFNDSQ ATKDA TI+GLN +RIINEPTAA
Sbjct: 147 PAYFNDSQRQATKDAATIAGLNAIRIINEPTAA 179
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 49.6 bits (113), Expect = 3e-07
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFN +Q AT++A I+GL VLRI+NEPTAA
Sbjct: 144 PAYFNATQRRATEEAAEIAGLKVLRILNEPTAA 176
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 49.6 bits (113), Expect = 3e-07
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PAYFN +Q AT++A I+GL VLRI+NEPTAA
Sbjct: 144 PAYFNATQRRATEEAAEIAGLKVLRILNEPTAA 176
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 35.9 bits (79), Expect = 0.004
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTA 96
P+YF D Q A A +GLN LRI+NE TA
Sbjct: 147 PSYFTDVQRRAVLSAIQYAGLNSLRIVNETTA 178
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 35.1 bits (77), Expect = 0.007
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
PA FN+ Q + T A I+ + V R+I+EPTAA
Sbjct: 182 PAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAA 214
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 32.3 bits (70), Expect = 0.047
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 1 PAYFNDSQMHATKDAGTISGLNVLRIINEPTAA 99
P YF ++ A + A ++GL VL++IN+ TAA
Sbjct: 169 PVYFTPAERLAVERAAQMAGLTVLQLINDGTAA 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.128 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,314,646
Number of Sequences: 27780
Number of extensions: 21446
Number of successful extensions: 47
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 12,740,198
effective HSP length: 14
effective length of database: 12,351,278
effective search space used: 222323004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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