Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H21
(272 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 62 4e-11
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 61 1e-10
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 59 5e-10
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 59 5e-10
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 59 5e-10
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 59 5e-10
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 59 5e-10
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 59 5e-10
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 59 5e-10
12_02_1282 + 27528159-27529148,27529549-27529614 58 1e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 52 6e-08
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 38 8e-04
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 36 0.003
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 35 0.010
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 34 0.013
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 31 0.13
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 28 1.2
12_01_0843 + 7891622-7892524 27 1.5
02_05_0477 - 29339649-29340253,29340880-29341492 27 1.5
06_03_0013 - 15393830-15394060,15394238-15394672 27 2.7
04_04_0692 - 27307349-27307728,27308381-27308546 27 2.7
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 26 3.6
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 26 4.7
01_05_0324 - 20946774-20946935,20947301-20947780 26 4.7
12_02_1262 + 27415191-27415279,27415367-27415565,27415635-274157... 25 6.3
10_02_0104 + 5327667-5328232,5328331-5328463,5329065-5329140,532... 25 6.3
10_02_0103 - 5320938-5321145,5321254-5321819 25 6.3
04_03_0308 + 14182034-14182522,14182632-14182751,14183694-141839... 25 6.3
10_08_0809 - 20725858-20725950,20726375-20726545,20726895-207271... 25 8.3
01_06_0265 - 28011181-28011240,28011298-28011375,28011493-280118... 25 8.3
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 62.5 bits (145), Expect = 4e-11
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIV 36
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 28 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 56
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 60.9 bits (141), Expect = 1e-10
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIV 36
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 28 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 56
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
E++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 57.6 bits (133), Expect = 1e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
+++ LV DNG+GM KAGFAGDDAPRAVFPSIV
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIV 37
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +3
Query: 186 PAPYFPRSWGDLVTRAVMVGMGQKDSYVG 272
P FP G VMVGMGQKD+YVG
Sbjct: 29 PRAVFPSIVGRPRHTGVMVGMGQKDAYVG 57
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 52.0 bits (119), Expect = 6e-08
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 208
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 38.3 bits (85), Expect = 8e-04
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
+V DNG+G K GFAG++ P +VFP +V
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVV 34
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 36.3 bits (80), Expect = 0.003
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPS 205
+V+DNG G+ KAGF GD P AV P+
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPN 33
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 34.7 bits (76), Expect = 0.010
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 125 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 34.3 bits (75), Expect = 0.013
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 125 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
+V+DNG+ + G+AG+ PR F +IV
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIV 49
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 125 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 205
A+VVD GS + KAG A D +P V PS
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS 30
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAV 196
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 217 TSSPGRSWSAWVRRTP 264
T + R+W+AW RRTP
Sbjct: 164 TVAKRRAWAAWTRRTP 179
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 210 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 109
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 125 ALVVDNGSGMCKAGFAGDDAP 187
+++VD GSG CK G++ AP
Sbjct: 141 SIIVDGGSGYCKYGWSKYAAP 161
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 247 MPTMTALVTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGN 119
+PT T+ R RG G ++ G VYD +GN
Sbjct: 24 LPTATSPARRRRRRRGGGGGAAISPSTVCHITGGSYVYDSKGN 66
>01_05_0324 - 20946774-20946935,20947301-20947780
Length = 213
Score = 25.8 bits (54), Expect = 4.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +3
Query: 126 RWS*TMGPECAKPVSRETTLPAPYFP---RSWGDLV---TRAVMVGMGQKD 260
RW T+ E PV+ E PAP FP + GD+ +R + G+GQ++
Sbjct: 21 RWRRTV-KETKHPVASEAKPPAPTFPTAIQKDGDICLEKSRVHLPGLGQRE 70
>12_02_1262 +
27415191-27415279,27415367-27415565,27415635-27415775,
27415939-27416003,27416111-27416489,27416688-27417149,
27417226-27417546,27418184-27418501
Length = 657
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 64 IYLIGLFN*KLIHNVRRGSCRVGRRQ 141
IYL+ LF+ ++ VR S +GR Q
Sbjct: 384 IYLLQLFHENILRKVREKSLNIGRYQ 409
>10_02_0104 +
5327667-5328232,5328331-5328463,5329065-5329140,
5329617-5329675,5331014-5331322,5331753-5331797
Length = 395
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 162 PVSRETTLPAPYFPRSWGDLVTRAVM 239
P+ RE YF + WGD V R +M
Sbjct: 177 PIDREEIFD--YFRQKWGDCVVRVLM 200
>10_02_0103 - 5320938-5321145,5321254-5321819
Length = 257
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 162 PVSRETTLPAPYFPRSWGDLVTRAVM 239
P+ RE YF + WGD V R +M
Sbjct: 177 PIDREEIFD--YFRQKWGDCVVRVLM 200
>04_03_0308 +
14182034-14182522,14182632-14182751,14183694-14183937,
14184020-14184312
Length = 381
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 226 VTRSPHDRGKYGAGSVVSRET 164
+ R PHD+ K G S+VS T
Sbjct: 352 ICRGPHDKNKCGVDSMVSSVT 372
>10_08_0809 -
20725858-20725950,20726375-20726545,20726895-20727101,
20727208-20727879
Length = 380
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 201 GNTARGASSPAKPALHIPDPLSTT 130
GN +SP P+ +P PL+TT
Sbjct: 59 GNARNTLASPPPPSFPLPVPLTTT 82
>01_06_0265 -
28011181-28011240,28011298-28011375,28011493-28011802,
28012913-28013533,28013733-28013818
Length = 384
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 201 GNTARGASSPAKPALHIPDPLSTTNAATSSSHI 103
G R +S+PA+ + P P +TT + T S++
Sbjct: 181 GKILRRSSAPAEKLMPPPPPSTTTGSYTRGSNL 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,657,090
Number of Sequences: 37544
Number of extensions: 113279
Number of successful extensions: 388
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -