BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_H17
(385 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118575-1|AAM49944.1| 453|Drosophila melanogaster LD43175p pro... 79 1e-15
AF237613-1|AAF60328.1| 453|Drosophila melanogaster YELLOW-B pro... 79 1e-15
AE014134-2765|AAF53564.1| 453|Drosophila melanogaster CG17914-P... 79 1e-15
AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p pro... 78 5e-15
AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA... 78 5e-15
AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p pro... 76 1e-14
AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA... 76 1e-14
BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p pro... 73 1e-13
AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-P... 73 1e-13
X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene pr... 61 4e-10
AL023873-2|CAA19640.1| 541|Drosophila melanogaster EG:125H10.2,... 61 4e-10
AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA p... 61 4e-10
AE014135-44|AAF59358.2| 463|Drosophila melanogaster CG1629-PA p... 57 7e-09
BT003303-1|AAO25063.1| 432|Drosophila melanogaster GH10609p pro... 45 3e-05
AY118803-1|AAM50663.1| 356|Drosophila melanogaster GH20107p pro... 45 3e-05
AE013599-3589|AAF46992.2| 432|Drosophila melanogaster CG9889-PA... 45 3e-05
AY121706-1|AAM52033.1| 412|Drosophila melanogaster RH49821p pro... 44 9e-05
AE013599-3590|AAF46993.1| 412|Drosophila melanogaster CG9891-PA... 44 9e-05
AY071114-1|AAL48736.1| 358|Drosophila melanogaster RE16722p pro... 41 5e-04
BT012297-1|AAS77422.1| 320|Drosophila melanogaster SD22926p pro... 28 4.8
AE014297-3748|AAF56429.1| 320|Drosophila melanogaster CG11875-P... 28 4.8
>AY118575-1|AAM49944.1| 453|Drosophila melanogaster LD43175p
protein.
Length = 453
Score = 79.4 bits (187), Expect = 1e-15
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D + NF++ G W DGL+ +ALS P Y+HPL S EFSVDT IL+ +
Sbjct: 224 DPMAGNFSINGIEFQWDDGLYGLALSKPLETGYATLYFHPLCSTTEFSVDTSILRNKTLA 283
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVV 359
REF V G+RGP TQ+ A + T V+ +A + + CW T S + +
Sbjct: 284 TSPMIYREFKVLGSRGPNTQAGAEFLDPDTGVLFYALPNLNEVACWRTATDFSHSSQSRI 343
Query: 360 AQDHQKLL 383
++ L+
Sbjct: 344 HMNNDTLV 351
>AF237613-1|AAF60328.1| 453|Drosophila melanogaster YELLOW-B
protein.
Length = 453
Score = 79.4 bits (187), Expect = 1e-15
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D + NF++ G W DGL+ +ALS P Y+HPL S EFSVDT IL+ +
Sbjct: 224 DPMAGNFSINGIEFQWDDGLYGLALSKPLETGYATLYFHPLCSTTEFSVDTSILRNKTLA 283
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVV 359
REF V G+RGP TQ+ A + T V+ +A + + CW T S + +
Sbjct: 284 TSPMIYREFKVLGSRGPNTQAGAEFLDPDTGVLFYALPNLNEVACWRTATDFSHSSQSRI 343
Query: 360 AQDHQKLL 383
++ L+
Sbjct: 344 HMNNDTLV 351
>AE014134-2765|AAF53564.1| 453|Drosophila melanogaster CG17914-PA
protein.
Length = 453
Score = 79.4 bits (187), Expect = 1e-15
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D + NF++ G W DGL+ +ALS P Y+HPL S EFSVDT IL+ +
Sbjct: 224 DPMAGNFSINGIEFQWDDGLYGLALSKPLETGYATLYFHPLCSTTEFSVDTSILRNKTLA 283
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVV 359
REF V G+RGP TQ+ A + T V+ +A + + CW T S + +
Sbjct: 284 TSPMIYREFKVLGSRGPNTQAGAEFLDPDTGVLFYALPNLNEVACWRTATDFSHSSQSRI 343
Query: 360 AQDHQKLL 383
++ L+
Sbjct: 344 HMNNDTLV 351
>AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p
protein.
Length = 452
Score = 77.8 bits (183), Expect = 5e-15
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D S + ++ G W DG+FSI L R AY+HP+ S EF V ++L+ +
Sbjct: 273 DPLSGDLSIGGQTFRWDDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQESNA 332
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVV 359
+ +F V G+RGP TQS HA T V+ F + ++ + CW + P+ + V
Sbjct: 333 ARSDHGNDFRVLGSRGPSTQSTMHAYDPGTGVIFFDEIQRNGVGCWKTSKPISAENYGSV 392
Query: 360 AQDHQKLL 383
+ + ++
Sbjct: 393 DSNAEDMI 400
>AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA
protein.
Length = 452
Score = 77.8 bits (183), Expect = 5e-15
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D S + ++ G W DG+FSI L R AY+HP+ S EF V ++L+ +
Sbjct: 273 DPLSGDLSIGGQTFRWDDGIFSITLGAQKLDGSRDAYFHPMASTNEFVVSNRVLQQESNA 332
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVV 359
+ +F V G+RGP TQS HA T V+ F + ++ + CW + P+ + V
Sbjct: 333 ARSDHGNDFRVLGSRGPSTQSTMHAYDPGTGVIFFDEIQRNGVGCWKTSKPISAENYGSV 392
Query: 360 AQDHQKLL 383
+ + ++
Sbjct: 393 DSNAEDMI 400
>AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p
protein.
Length = 438
Score = 76.2 bits (179), Expect = 1e-14
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +3
Query: 27 NFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILKS-----GGEN 191
+F V G W DG+F +A+ P + + + Y+H L S +EF V ++L++ G++
Sbjct: 263 DFNVGGVNFQWTDGVFGLAVGPMNPDHSKDIYFHALASTKEFKVSNRVLQNESHVTAGDS 322
Query: 192 FAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQDH 371
+ +F G RG QS A T V+ + V +DAI CWNI P P ++ D
Sbjct: 323 YY-DFKYVGDRGMNGQSTAEVFDPETGVIFYTQVNKDAIACWNIKRPYTPDTQGLIDSDS 381
Query: 372 QKLL 383
L+
Sbjct: 382 HTLV 385
>AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA
protein.
Length = 438
Score = 76.2 bits (179), Expect = 1e-14
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +3
Query: 27 NFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILKS-----GGEN 191
+F V G W DG+F +A+ P + + + Y+H L S +EF V ++L++ G++
Sbjct: 263 DFNVGGVNFQWTDGVFGLAVGPMNPDHSKDIYFHALASTKEFKVSNRVLQNESHVTAGDS 322
Query: 192 FAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQDH 371
+ +F G RG QS A T V+ + V +DAI CWNI P P ++ D
Sbjct: 323 YY-DFKYVGDRGMNGQSTAEVFDPETGVIFYTQVNKDAIACWNIKRPYTPDTQGLIDSDS 381
Query: 372 QKLL 383
L+
Sbjct: 382 HTLV 385
>BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p
protein.
Length = 447
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D S N + G W DG+FS L R ++HP+ S EF V ++L+ +
Sbjct: 268 DPLSDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEFVVSNRVLQQEFNA 327
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTP 332
+ +F++ GTRGP TQS H T V+ FA V + + CW + P
Sbjct: 328 ARSDHGDDFHLLGTRGPSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTSKP 378
>AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-PA
protein.
Length = 429
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK----S 179
D S N + G W DG+FS L R ++HP+ S EF V ++L+ +
Sbjct: 250 DPLSDNLNIGGQTFRWDDGIFSATLGSYKPDGSRDVFFHPMASTNEFVVSNRVLQQEFNA 309
Query: 180 GGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTP 332
+ +F++ GTRGP TQS H T V+ FA V + + CW + P
Sbjct: 310 ARSDHGDDFHLLGTRGPSTQSTMHKYDPRTGVIFFAEVQKSGVGCWKTSKP 360
>X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene
protein.
Length = 541
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +3
Query: 27 NFTVAGNVINW-KDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK--SGGENFA 197
+F VAG W ++G+F ++LSP + R Y+ PL S ++F+V T+IL+ + E+
Sbjct: 234 DFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTEDSY 293
Query: 198 REFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+F RGP + + + + + LF + Q+A+ CW+ + P P +V +D
Sbjct: 294 HDFVALDERGPNSHTTSR-VMSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRD 349
>AL023873-2|CAA19640.1| 541|Drosophila melanogaster
EG:125H10.2,FBgn0004034;y protein.
Length = 541
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +3
Query: 27 NFTVAGNVINW-KDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK--SGGENFA 197
+F VAG W ++G+F ++LSP + R Y+ PL S ++F+V T+IL+ + E+
Sbjct: 234 DFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTEDSY 293
Query: 198 REFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+F RGP + + + + + LF + Q+A+ CW+ + P P +V +D
Sbjct: 294 HDFVALDERGPNSHTTSR-VMSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRD 349
>AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA
protein.
Length = 541
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +3
Query: 27 NFTVAGNVINW-KDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK--SGGENFA 197
+F VAG W ++G+F ++LSP + R Y+ PL S ++F+V T+IL+ + E+
Sbjct: 234 DFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDETRTEDSY 293
Query: 198 REFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+F RGP + + + + + LF + Q+A+ CW+ + P P +V +D
Sbjct: 294 HDFVALDERGPNSHTTSR-VMSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRD 349
>AE014135-44|AAF59358.2| 463|Drosophila melanogaster CG1629-PA
protein.
Length = 463
Score = 57.2 bits (132), Expect = 7e-09
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQIL------ 173
D + +F V G W DG+F +++ +R Y+HP+ S +EF V IL
Sbjct: 257 DPFASDFNVYGLNFQWLDGVFGMSIYYNKKIMERVLYFHPMASFKEFMVPMNILLNESVW 316
Query: 174 KSGGENFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHV 350
++ + +A+ F G RG +QS + +M F V QD I CW+ + P +H+
Sbjct: 317 QTNTQEYAKYFIPIGDRGYNSQSSTSGV-TRNGIMFFTQVHQDDIGCWDTSKPYTRAHL 374
>BT003303-1|AAO25063.1| 432|Drosophila melanogaster GH10609p
protein.
Length = 432
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +3
Query: 33 TVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK------SGGENF 194
T+AG DG+F++ N +KR Y+HPL S E+SV L +G E
Sbjct: 251 TIAGESFYLMDGMFAL------NNDKRNLYFHPLASASEYSVPLSALNRQQNWANGPEAL 304
Query: 195 AREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTP 332
EF + G R +++ A AI G V + WN+N+P
Sbjct: 305 PEEFRLLGRR--RSECAASAIDGRNNVYC-VTFNPVKLFVWNVNSP 347
>AY118803-1|AAM50663.1| 356|Drosophila melanogaster GH20107p
protein.
Length = 356
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +3
Query: 33 TVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK------SGGENF 194
T+AG DG+F++ N +KR Y+HPL S E+SV L +G E
Sbjct: 175 TIAGESFYLMDGMFAL------NNDKRNLYFHPLASASEYSVPLSALNRQQNWANGPEAL 228
Query: 195 AREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTP 332
EF + G R +++ A AI G V + WN+N+P
Sbjct: 229 PEEFRLLGRR--RSECAASAIDGRNNVYC-VTFNPVKLFVWNVNSP 271
>AE013599-3589|AAF46992.2| 432|Drosophila melanogaster CG9889-PA
protein.
Length = 432
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +3
Query: 33 TVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILK------SGGENF 194
T+AG DG+F++ N +KR Y+HPL S E+SV L +G E
Sbjct: 251 TIAGESFYLMDGMFAL------NNDKRNLYFHPLASASEYSVPLSALNRQQNWANGPEAL 304
Query: 195 AREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTP 332
EF + G R +++ A AI G V + WN+N+P
Sbjct: 305 PEEFRLLGRR--RSECAASAIDGRNNVYC-VTFNPVKLFVWNVNSP 347
>AY121706-1|AAM52033.1| 412|Drosophila melanogaster RH49821p
protein.
Length = 412
Score = 43.6 bits (98), Expect = 9e-05
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Frame = +3
Query: 30 FTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILKSGG-------E 188
FT+AG DG S L+P +R Y+H L S+ + ++ ++ +G
Sbjct: 235 FTIAGESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNGSNWRLNDVS 294
Query: 189 NFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+F + G RG + + A + G ++ V ++L WNI T ++ ++ +D
Sbjct: 295 AALDQFQLLGKRGSQCVAAAMSESG---FLICGLVQPASLLAWNIRTGYSHQNLVMLVED 351
Query: 369 HQKL 380
Q+L
Sbjct: 352 EQRL 355
>AE013599-3590|AAF46993.1| 412|Drosophila melanogaster CG9891-PA
protein.
Length = 412
Score = 43.6 bits (98), Expect = 9e-05
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Frame = +3
Query: 30 FTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQILKSGG-------E 188
FT+AG DG S L+P +R Y+H L S+ + ++ ++ +G
Sbjct: 235 FTIAGESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNGSNWRLNDVS 294
Query: 189 NFAREFNVEGTRGPKTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+F + G RG + + A + G ++ V ++L WNI T ++ ++ +D
Sbjct: 295 AALDQFQLLGKRGSQCVAAAMSESG---FLICGLVQPASLLAWNIRTGYSHQNLVMLVED 351
Query: 369 HQKL 380
Q+L
Sbjct: 352 EQRL 355
>AY071114-1|AAL48736.1| 358|Drosophila melanogaster RE16722p
protein.
Length = 358
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 12 DEASLNFTVAGNVINWKDGLFSIALSPPDNCNKRRAYYHPLVSKQEFSVDTQIL------ 173
D + +F V G W DG+F +++ +R Y+HP+ S +EF V IL
Sbjct: 257 DPFASDFNVYGLNFQWLDGVFGMSIYYNKKIMERVLYFHPMASFKEFMVPMNILLNESVW 316
Query: 174 KSGGENFAREFNVEGTRGPKTQS 242
++ + +A+ F G RG +QS
Sbjct: 317 QTNTQEYAKYFIPIGDRGYNSQS 339
>BT012297-1|AAS77422.1| 320|Drosophila melanogaster SD22926p
protein.
Length = 320
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 207 NVEGTRGP-KTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+VE + P + WAH+ ++ + + G D ++ W++N P +P+ V V +D
Sbjct: 200 SVESPKFPLMSADWAHS----NRLFITSLAGGD-VVTWDLNRPYVPADVKQVHED 249
>AE014297-3748|AAF56429.1| 320|Drosophila melanogaster CG11875-PA
protein.
Length = 320
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 207 NVEGTRGP-KTQSWAHAIHGPTKVMLFANVGQDAILCWNINTPLIPSHVAVVAQD 368
+VE + P + WAH+ ++ + + G D ++ W++N P +P+ V V +D
Sbjct: 200 SVESPKFPLMSADWAHS----NRLFITSLAGGD-VVTWDLNRPYVPADVKQVHED 249
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,015,958
Number of Sequences: 53049
Number of extensions: 317032
Number of successful extensions: 1104
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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